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Functional analysis of small RNA in the reprogramming process from differentiated cells to pluripotent stem cells

Research Project

Project/Area Number 22870036
Research Category

Grant-in-Aid for Research Activity Start-up

Allocation TypeSingle-year Grants
Research Field Plant molecular biology/Plant physiology
Research InstitutionNational Institute for Basic Biology

Principal Investigator

TAMADA Yosuke  基礎生物学研究所, 生物進化研究部門, 助教 (50579290)

Research Collaborator HASEBE Mitsuyasu  基礎生物学研究所, 生物進化研究部門, 教授 (40237996)
MORI Hitoshi  名古屋大学, 大学院・生命農学研究科, 教授 (20220014)
LI Chen  総合研究大学院大学, 生命科学研究科, 大学院生
Project Period (FY) 2010 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥3,146,000 (Direct Cost: ¥2,420,000、Indirect Cost: ¥726,000)
Fiscal Year 2011: ¥1,508,000 (Direct Cost: ¥1,160,000、Indirect Cost: ¥348,000)
Fiscal Year 2010: ¥1,638,000 (Direct Cost: ¥1,260,000、Indirect Cost: ¥378,000)
Keywordsリプログラミング / 幹細胞 / 低分子RNA / ヒメツリガネゴケ / エピジェネティクス
Research Abstract

We had found that expression of small RNAs is globally reduced during reprogramming in the moss Physcomitrella patens. We hypothesized that PpCSP proteins are involved in this process. PpCSP is presumed to function in the repression of the microRNA(miRNA) maturation. Here we found that PpCSP was localized in cytosol, and a PpCSP lesion caused attenuated reprogramming. These data suggest that PpCSP facilitates reprogramming through repressing the miRNA maturation in cytosol. To verify this hypothesis, we have performed the functional analyses of PpCSP.

Report

(3 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • Research Products

    (23 results)

All 2012 2011 Other

All Journal Article (5 results) (of which Peer Reviewed: 3 results) Presentation (9 results) Book (1 results) Remarks (8 results)

  • [Journal Article] ARABIDOPSIS TRITHORAX-RELATED3/SET DOMAIN GROUP2 is required for the winter-annual habit of Arabidopsis thaliana2012

    • Author(s)
      Jae-Young Yun^§, Yosuke Tamada^§, Ye eun Kang, Richard M. Amasino
    • Journal Title

      Plant and Cell Physiology

      Volume: 53巻 Pages: 834-846

    • NAID

      10030654384

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] A hidden Polycomb response element shows up in silence2012

    • Author(s)
      Diana M. Buzas, Yosuke Tamada, Tetsuya Kurata
    • Journal Title

      Plant and Cell Physiology

      Volume: 53巻 Pages: 785-793

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] ARABIDOPSIS TRITHORAX-RELATED3/SET DOMAIN GROUP2 is required for the winter-annual habit of Arabidopsis thaliana2012

    • Author(s)
      Jae-Young Yun, Yosuke Tamada, et al
    • Journal Title

      Plant and Cell Physiology

      Volume: 53(In press) Issue: 5 Pages: 834-846

    • DOI

      10.1093/pcp/pcs021

    • NAID

      10030654384

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 植物の生活環とエピジェネティックな遺伝子発現制御機構2011

    • Author(s)
      玉田洋介、角谷徹仁
    • Journal Title

      細胞工学

      Volume: 30巻 Pages: 174-179

    • Related Report
      2011 Final Research Report
  • [Journal Article] 植物の生活環とエピジェネティックな遺伝子発現制御2011

    • Author(s)
      玉田洋介、角谷徹仁
    • Journal Title

      細胞工学

      Volume: 30 Pages: 174-179

    • Related Report
      2010 Annual Research Report
  • [Presentation] Evolution of the developmental functions of histone methylations in land plants2012

    • Author(s)
      Yosuke Tamada
    • Organizer
      The 8th Okazaki Biology Conference
    • Place of Presentation
      基礎生物学研究所(愛知県)(招待講演)
    • Year and Date
      2012-03-22
    • Related Report
      2011 Final Research Report
  • [Presentation] Evolution of the Developmental Functions of Histone Methylations in Land Plants2012

    • Author(s)
      Yosuke Tamada
    • Organizer
      The 8th Okazaki Biology Conference
    • Place of Presentation
      基礎生物学研究所(愛知県)(招待講演)
    • Year and Date
      2012-03-22
    • Related Report
      2011 Annual Research Report
  • [Presentation] ATXR3, a novel histone methyltransferase, is required for the epigenetic activation of FLC and the flowering repression2012

    • Author(s)
      Yosuke Tamada
    • Organizer
      The 53rd annual meeting of the Japanese society of plant physiologists
    • Place of Presentation
      京都産業大学(京都府)
    • Year and Date
      2012-03-17
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Presentation] Epigenome and transcriptome analyses using the histone methyltransferase mutant of Physcomitrella patens2012

    • Author(s)
      Yosuke Tamada
    • Organizer
      The 53rd annual meeting of the Japanese society of plant physiologists
    • Place of Presentation
      京都産業大学(京都府)
    • Year and Date
      2012-03-16
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Presentation] ヒメツリガネゴケ野生型およびH3K27メチル化酵素欠失株を用いたトランスクリプトーム・エピゲノム解析2011

    • Author(s)
      玉田洋介
    • Organizer
      生命情報科学若手の会第3回研究会
    • Place of Presentation
      基礎生物学研究所(愛知県)
    • Year and Date
      2011-10-16
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Presentation] ヒストン修飾とnon-coding RNA :花成を制御する協調関係2011

    • Author(s)
      玉田洋介
    • Organizer
      日本遺伝学会第83回大会(招待講演)
    • Place of Presentation
      京都大学(京都府)
    • Year and Date
      2011-09-22
    • Related Report
      2011 Final Research Report
  • [Presentation] ヒストン修飾とnon-coding RNA:花成を制御する協調関係2011

    • Author(s)
      玉田洋介
    • Organizer
      日本遺伝学会第83回大会
    • Place of Presentation
      京都大学(京都府)(招待講演)
    • Year and Date
      2011-09-22
    • Related Report
      2011 Annual Research Report
  • [Presentation] 開花を制御するエピジェネティクス機構2011

    • Author(s)
      玉田洋介
    • Organizer
      第17回植物バイテクシンポジウム(招待講演)
    • Place of Presentation
      京都府立大学(京都府)
    • Year and Date
      2011-01-27
    • Related Report
      2011 Final Research Report
  • [Presentation] 開花を制御するエピジェネティクス機構2011

    • Author(s)
      玉田洋介
    • Organizer
      植物バイテクシンポジウム
    • Place of Presentation
      京都府立大学(京都府)
    • Year and Date
      2011-01-27
    • Related Report
      2010 Annual Research Report
  • [Book] 植物の分子育種学2011

    • Author(s)
      星野敦、玉田洋介
    • Publisher
      講談社
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Remarks] (1)国際誌Plant and Cell Physiologyの特集号"Plant Epigenetics"のオーガナイズを行った。

    • URL

      http://www.oxfordjournals.org/our_journals/pcp/specialfocusissue_plant_epigenetics.html

    • Related Report
      2011 Final Research Report
  • [Remarks] (2) The 53rd annual meeting of the Japanese society of plant physiologistsにおいて、シンポジウム"Response to environmental/developmental signals and regulation of epigenetic state of chromatin"をオーガナイズした。

    • Related Report
      2011 Final Research Report
  • [Remarks] (3) The 52rd annual meeting of the Japanese society of plant physiologistsにおいて、シンポジウム"Frontier of Epigenetics : Regulation and function of chromatin modifications"をオーガナイズした。当シンポジウムはPlant and Cell Physiology誌のFirst sponsored symposiumに選出され、特集号"Plant Epigen

    • Related Report
      2011 Final Research Report
  • [Remarks] (4)ホームページ等

    • URL

      http://www.nibb.ac.jp/sections/evolutionary_biology_and_biodiversity/hasebe/

    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://www.nibb.ac.jp/evodevo/

    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://www.nibb.ac.jp/evodevo/

    • Related Report
      2011 Annual Research Report
  • [Remarks]

    • URL

      http://www.nibb.ac.jp/sections/hasebe.html

    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://www.nibb/ac.jp/evodevo/

    • Related Report
      2010 Annual Research Report

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Published: 2010-08-27   Modified: 2016-04-21  

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