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Non-linear DNA repair responses caused by interference between competitive repair pathways

Research Project

Project/Area Number 23651049
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Risk sciences of radiation/Chemicals
Research InstitutionJapan Atomic Energy Agency

Principal Investigator

YOKOYA Akinari  独立行政法人日本原子力研究開発機構, 原子力科学研究部門・先端基礎研究センター, 研究主席 (10354987)

Project Period (FY) 2011 – 2012
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2012: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2011: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
KeywordsクラスターDNA損傷 / DNA修復応答 / 酵素反応干渉 / 非線形性 / 塩基除去修復 / Nth / Fpg / 炭素イオンビーム / DNA変性とアニーリング / 放射線、X線、粒子線 / 酵素作用機序 / DNA変性 / 放射線 / DNA損傷 / 干渉 / グリコシレース / プラスミドDNA / DNA2本鎖切断
Research Abstract

Ionizing radiation induce localized DNA damage composed of various base lesions (clustered damage). It is expected that damage repair enzymes would be interfered at the localized area on DNA. In this study we aimed to clarify whether the variation of enzymatic processes modify each enzymatic activities at clustered damage site. DNA samples exposed to X-rays were treated with two base excision repair enzymes, namely Nth and Fpg. The enzymes were added sequentially or simultaneously. Contrast to our initial expectation, change of the order of the enzymatic treatments did not affect the activities of the enzymes. This result suggests that, even in a cluster damage site, each base lesions substantially separated not to induce interference between each enzymatic pathways.

Report

(4 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • 2011 Research-status Report
  • Research Products

    (26 results)

All 2014 2013 2012 2011 Other

All Journal Article (7 results) (of which Peer Reviewed: 6 results) Presentation (16 results) (of which Invited: 2 results) Book (1 results) Remarks (2 results)

  • [Journal Article] Order effect of repair processes to clustered DNA damage2014

    • Author(s)
      Iyo SHIRAISHI, Masao SUZUKI, Naoya SHIKAZONO, Kentaro FUJII and Akinari YOKOYA
    • Journal Title

      Journal of Radiation Research

      Volume: 55 Issue: suppl 1 Pages: i92-i93

    • DOI

      10.1093/jrr/rrt152

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Dependence of the yields of AP sites and AP clusters produced in plasmid DNA on scavenging capacity and LET2014

    • Author(s)
      Takuya SHIINA, RitsukoWATANABE, Masao SUZUKI and Akinari YOKOYA
    • Journal Title

      Journal of Radiation Research

      Volume: 55 Issue: suppl 1 Pages: i15-i16

    • DOI

      10.1093/jrr/rrt160

    • NAID

      120006683955

    • Related Report
      2013 Annual Research Report
  • [Journal Article] 放射線生物学の最前線-DNA損傷機構と損傷修復の分子シミュレーション2014

    • Author(s)
      横谷明徳、高須昌子、石川顕一
    • Journal Title

      日本原子力学会誌ATOM∑

      Volume: 56 Pages: 23-27

    • NAID

      130007739582

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 分光学的アプローチによる放射線によるゲノム損傷と生体修復の研究2014

    • Author(s)
      横谷明徳、鵜飼正敏、岡壽崇、甲斐健師、渡邊立子、藤井健太郎
    • Journal Title

      原子衝突学会誌「しょうとつ」

      Volume: 11 Pages: 33-39

    • NAID

      10031006039

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Induction of DNA damage, including abasic sites, in plasmid DNA by carbon ion and X-ray irradiation2013

    • Author(s)
      Shiina, T., Watanabe, R., Shiraishi, I., Suzuki, M., Sugaya, Y., Fujii, K. and Yokoya, A
    • Journal Title

      Radiat. Environ. Biophys

      Volume: 52 Pages: 99-112

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Yield of single-, double-strand breaks and nucleobase lesions in fully hydrated plasmid DNA films irradiated with high-LET charged particles2012

    • Author(s)
      Ushigome, T., Shikazono, N., Fujii, K., Watanabe, R., Suzuki, M., Tsuruoka, C., Tauchi, H. and Yokoya, A
    • Journal Title

      Radiat. Res

      Volume: 177 Pages: 614-627

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] A novel technique using DNA denaturation to detect multiply induced single-strand breaks in a hydrated plasmid DNA molecule by X-ray and 4He2+ ion irradiation2011

    • Author(s)
      Yokoya, A., Shikazono, N., Fujii, K., Noguchi, M. and Urushibara, A
    • Journal Title

      Radiat. Protect. Dosim

      Volume: 143 Pages: 219-225

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Presentation] Molecular and Cellular Effect of Ionizing Radiation2013

    • Author(s)
      Yokoya, A., Oka, T., Fujii, K., Shiina, T., Sugaya, Y., Shiraishi, I., Urushibara, A., Narita1, A., Noguchi, M. and Watanabe, R
    • Organizer
      The 16th SANKEN International The 11th SANKEN Nanotechnology Symposium
    • Place of Presentation
      Osaka, Japan
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Order effect of repair processes to clustered DNA damage2013

    • Author(s)
      Shiraishi I, Suzuki M, Shikazono N, Fujii K and Yokoya A.
    • Organizer
      Heavy Ion in Therapy and Space Radiation Symposium 2013
    • Place of Presentation
      Chiba
    • Related Report
      2013 Annual Research Report
  • [Presentation] Dependence of the yields of AP sites and AP clusters produced in plasmid DNA on scavenging capacity and LET2013

    • Author(s)
      Shiina T, Watanabe R, Suzuki M and Yokoya A
    • Organizer
      Heavy Ion in Therapy and Space Radiation Symposium 2013
    • Place of Presentation
      Chiba
    • Related Report
      2013 Annual Research Report
  • [Presentation] Order effect of base excision processes to repair clustered DNA damage2013

    • Author(s)
      Iyo Shiraishi1, Masao Suzuki, Naoya Shikazono and Akinari Yokoya
    • Organizer
      Heavy Ion in Therapy and Space Radiation Symposium 2013
    • Place of Presentation
      千葉、京葉銀行カルチャープラザ
    • Related Report
      2012 Research-status Report
  • [Presentation] DNA 分子上の放射線損傷分布とDNA 損傷修復経路干渉の相関2012

    • Author(s)
      白石伊世, 椎名卓也, 菅谷雄基, 鹿園直哉, 横谷明徳
    • Organizer
      日本放射線影響学会第55回大会
    • Place of Presentation
      仙台市
    • Related Report
      2013 Final Research Report
  • [Presentation] Order effect of base excision processes to repair clustered DNA damage2012

    • Author(s)
      Shiraishi, I., Shikazono, N. and Yokoya, A
    • Organizer
      The 12th International Workshop on Radiation Damage to DNA
    • Place of Presentation
      Prague, Czech Republic
    • Related Report
      2013 Final Research Report
  • [Presentation] 放射線によるゲノムDNA 損傷の初期過程と生体修復2012

    • Author(s)
      横谷明徳
    • Organizer
      日本物理学会第67回年次大会
    • Place of Presentation
      西宮市
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Order effect of base excision processes to repair clustered DNA damage2012

    • Author(s)
      Iyo Shiraishi, Takuya Shiina, Yuki Sugaya, Naoya Shikazono and Akinari Yokoya
    • Organizer
      12th International Workshop on Radiation Damage to DNA
    • Place of Presentation
      Prague, Czech Republic
    • Related Report
      2012 Research-status Report
  • [Presentation] DNA分子上の放射線損傷分布とDNA損傷修復経路干渉の相関2012

    • Author(s)
      白石伊世、椎名卓也、菅谷雄基、鹿園直哉、横谷明徳
    • Organizer
      日本放射線影響学会第55回大会
    • Place of Presentation
      仙台、東北大学川内北キャンパス
    • Related Report
      2012 Research-status Report
  • [Presentation] 放射線によるゲノムDNA損傷の初期過程と生体修復2012

    • Author(s)
      横谷 明徳
    • Organizer
      2012年物理学会第67回年次大会 領域1シンポジウム 放射線が生体に与える影響‐原子分子から生物まで(招待講演)
    • Place of Presentation
      西宮
    • Related Report
      2011 Research-status Report
  • [Presentation] クラスターDNA損傷に対する塩基除去修復酵素の作用順序の効果II2011

    • Author(s)
      白石 伊世
    • Organizer
      日本放射線影響学会第54回大会
    • Place of Presentation
      神戸
    • Related Report
      2011 Research-status Report
  • [Presentation] Introduction to Synchrotron Radiation and Radio-biological Studies2011

    • Author(s)
      Akinari Yokoya
    • Organizer
      Surface Electro, Radiation, and Photo Chemistry International Master Course (SERP-Chem), EU Education & Training "ERASUMUS MUNDUS"(招待講演)
    • Place of Presentation
      Orsay, France
    • Related Report
      2011 Research-status Report
  • [Presentation] リンK殻吸収及びこれに続くAuger効果により生成するDNA塩基損傷2011

    • Author(s)
      横谷 明徳
    • Organizer
      PF研究会「エネルギー付与の不均一性に着目した放射線生物影響研究の展望」」(招待講演)
    • Place of Presentation
      つくば
    • Related Report
      2011 Research-status Report
  • [Presentation] Significance of the repair synthesis in determining the biological consequences of clustered DNA damage2011

    • Author(s)
      Naoya Shikazono
    • Organizer
      14th International Congress of Radiation Research (ICRR2011)
    • Place of Presentation
      Warsaw, Poland
    • Related Report
      2011 Research-status Report
  • [Presentation] 分光学的アプローチによる放射線によるゲノム損傷と生体修復の研究2011

    • Author(s)
      横谷 明徳
    • Organizer
      応用物理学会 放射線夏の学校(招待講演)
    • Place of Presentation
      仙台
    • Related Report
      2011 Research-status Report
  • [Presentation] クラスターDNA損傷の修復におけるPolIの役割2011

    • Author(s)
      鹿園 直哉
    • Organizer
      日本放射線影響学会第54回大会
    • Place of Presentation
      神戸
    • Related Report
      2011 Research-status Report
  • [Book] Chapter 20. Spectroscopic study of radiation-induced DNA lesions and their susceptibility to enzymatic repair. In : Charged particle and photon interactions with matter-recent advances, applications and interfaces, Eds., Y. Hatano, Y. Katsumura, and A. Mozumder2011

    • Author(s)
      Yokoya, A., Fujii, K., Shikazono, N. and Ukai, M
    • Publisher
      CRC/Taylor & Francis Group, USA
    • Related Report
      2013 Final Research Report
  • [Remarks]

    • URL

      http://asrc.jaea.go.jp/soshiki/gr/yokoya-gr/

    • Related Report
      2013 Final Research Report
  • [Remarks] 放射場生体分子科学研究グループ

    • URL

      http://asrc.jaea.go.jp/soshiki/gr/yokoya-gr/

    • Related Report
      2013 Annual Research Report

URL: 

Published: 2011-08-05   Modified: 2019-07-29  

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