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Analysis of In Situ Chemical Reaction Dynamics by a Multiple Resonance NMR Technique

Research Project

Project/Area Number 23710268
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Chemical biology
Research InstitutionKyoto University

Principal Investigator

YAMADA Hisatsugu  京都大学, 先端医工学研究ユニット, 助教 (80512764)

Project Period (FY) 2011 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2012: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2011: ¥2,990,000 (Direct Cost: ¥2,300,000、Indirect Cost: ¥690,000)
Keywords細胞内化学反応 / 多重共鳴 NMR / 分子プローブ / NMR イメージング / 多重共鳴NMR / 代謝解析 / NMRイメージング / ケミカルバイオロジー / 安定同位元素集積化 / 代謝反応 / 安定同位体ラベル
Research Abstract

NMR/MR is one of the most promising techniques for the in situ analysis of specific biochemical (metabolic) reactions, both in vitro and in vivo. In this research, we revealed that (1) one-dimensional triple-resonance NMR is applicable to metabolic analysis of 13C/15N-labeled uracil, (2) integration of stable isotopes into the biocompatible polymer-tag (13C/15N-PMPC) enabled observation of the selective triple resonance NMR signal of 13C/15N-PMPC at a nano-molar level in a mouse liver lysate, and (3) application of a multiple resonance NMR technique to a MR imaging allows us to obtain the selective MR image of 13C/15N-PMPC without endogenous noise signal.

Report

(3 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Research-status Report
  • Research Products

    (29 results)

All 2013 2012 2011 Other

All Journal Article (8 results) (of which Peer Reviewed: 8 results) Presentation (14 results) Book (2 results) Remarks (1 results) Patent(Industrial Property Rights) (4 results)

  • [Journal Article] Ruthenium Complexes with Hydrophobic Ligands that are Key Factors for Optical Imaging of Physiological Hypoxia2013

    • Author(s)
      Komatsu, H.; Yoshihara, K.; Yamada, H.; Kimura, Y.; Son, A.; Nishimoto, S.; Tanabe, K.
    • Journal Title

      Chem. Eur. J

      Volume: 19 Issue: 6 Pages: 1971-1977

    • DOI

      10.1002/chem.201202809

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Transporting Excess Electrons along Potential Energy Gradients Provided by 2'-Deoxyuridine Derivatives in DNA2012

    • Author(s)
      Ito, T.; Hamaguchi, Y.; Tanabe, K.; Yamada, H.; Nishimoto, S
    • Journal Title

      Angew. Chem. Int.

      Volume: 51 Pages: 7558-7561

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Synthesis and Photooxidation of Oligodeoxynucleotides Containing 5-Dimethylaminocytosine as an Efficient Hole-Trapping Site in the Positive-Charge Transfer through DNA duplexes2012

    • Author(s)
      Yamada, H.; Kurata, M.; Tanabe, K.; Ito, T.; Nishimoto, S
    • Journal Title

      Org. Biomol. Chem.

      Volume: 10 Issue: 10 Pages: 2035-2043

    • DOI

      10.1039/c2ob06642d

    • NAID

      120005054555

    • Related Report
      2012 Annual Research Report 2012 Final Research Report 2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] Transporting Excess Electrons along Potential Energy Gradients Provided by 2'-Deoxyuridine Derivatives in DNA2012

    • Author(s)
      Ito, T.; Hamaguchi, Y.; Tanabe, K.; Yamada, H.; Nishimoto, S.
    • Journal Title

      Angew. Chem. Int. Ed.

      Volume: 51 Issue: 30 Pages: 7558-7561

    • DOI

      10.1002/anie.201202141

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Substrate/Product-targeted NMR monitoring of pyrimidine catabolism and its inhibition by a clinical drug.2011

    • Author(s)
      Yamada H, Mizusawa K, Igarashi R, Tochio H, Shirakawa M, Tabata Y, Kimura Y, Kondo T, Aoyama Y, Sando S.
    • Journal Title

      ACS Chem Biol.

      Volume: 7 Issue: 3 Pages: 535-542

    • DOI

      10.1021/cb2003972

    • Related Report
      2012 Annual Research Report 2012 Final Research Report 2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] In Situ Analysis of [8-13C-7-15N]-Double-Labelled Theophylline by a Triple Resonance NMR Technique2011

    • Author(s)
      Yamaguchi, K.; Ueki, R.; Yamada, H.; Aoyama, Y.; Nonaka, H.; Sando, S
    • Journal Title

      Anal. Methods

      Volume: 7 Issue: 7 Pages: 1664-1666

    • DOI

      10.1039/c1ay05100h

    • Related Report
      2012 Final Research Report 2011 Research-status Report
    • Peer Reviewed
  • [Journal Article] Preparation of Functionalized Oligodeoxynucleotides and Photochemical One-Electron Oxidation of 5-Methylcytosine in DNA2011

    • Author(s)
      Tanabe, K.; Yamada, H.; Nishimoto S.
    • Journal Title

      J. Synth. Org. Chem. Jpn

      Volume: 69 Pages: 814-822

    • NAID

      10029438334

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Preparation of Functionalized Oligodeoxynucleotides and Photochemical One-electron Oxidation of 5-Methylcytosine in DNA2011

    • Author(s)
      Tanabe, K.; Yamada, H.; Nishimoto S.
    • Journal Title

      Journal of Synthetic Organic Chemistry, Japan

      Volume: 69 Issue: 7 Pages: 814-822

    • DOI

      10.5059/yukigoseikyokaishi.69.814

    • NAID

      10029438334

    • ISSN
      0037-9980, 1883-6526
    • Related Report
      2011 Research-status Report
    • Peer Reviewed
  • [Presentation] 安定同位元素ラベル化生体適合性高分子プローブの開発と磁気共鳴イメージングへの応用2013

    • Author(s)
      山田久嗣
    • Organizer
      第93回日本化学会春季年会
    • Place of Presentation
      立命館大学びわこ・くさつキャンパス
    • Related Report
      2012 Annual Research Report
  • [Presentation] 高感度多重共鳴 NMR 解析のための安定同位元素ラベル化生体適合性高分子プローブ2013

    • Author(s)
      山田久嗣
    • Organizer
      第93回日本化学会春季年会
    • Place of Presentation
      立命館大学びわこ・くさつキャンパス
    • Related Report
      2012 Annual Research Report
  • [Presentation] 安定同位元素を集積化した生体適合性高分子プローブの合成と多重共鳴 NMR 法による機能評価2012

    • Author(s)
      長谷川嘉則、山田久嗣、木村 祐、杤尾豪人、白川昌宏、杉原文徳、今井宏彦、高山裕生、松田哲也、矢野哲哉、山東信介、青山安宏、年光昭夫、近藤輝幸
    • Organizer
      第2回 CSJ Festa
    • Place of Presentation
      東京工業大学、東京
    • Year and Date
      2012-10-16
    • Related Report
      2012 Final Research Report
  • [Presentation] 高感度多重共鳴NMR に向けた安定同位体ラベル化高分子タグの開発2012

    • Author(s)
      山田久嗣、長谷川嘉則、木村 祐、杤尾豪人、白川昌宏、矢野哲哉、山東信介、青山安宏、近藤輝幸
    • Organizer
      6回バイオ関連化学シンポジウム
    • Place of Presentation
      北海道大学、札幌、北海道
    • Year and Date
      2012-09-06
    • Related Report
      2012 Final Research Report
  • [Presentation] Triple resonance NMR in application to in situ monitoring of targeted metabolic reaction and its inhibition by a clinical drug2012

    • Author(s)
      Yamada, H.; Mizusawa, K.; Igarashi, R.; Tochio, H.; Shirakawa, M.; Tabata, Y.; Kimura, Y.; Kondo, T.; Aoyama, Y.; Sando, S.
    • Organizer
      244th ACS National Meeting
    • Place of Presentation
      Philadelphia, PA
    • Year and Date
      2012-08-21
    • Related Report
      2012 Annual Research Report 2012 Final Research Report
  • [Presentation] 基質/代謝物選択的 NMR を応用した生体内代謝プロセスの直接追跡と薬剤活性のその場評価"2012

    • Author(s)
      山田久嗣、水澤圭吾、五十嵐龍二、杤尾豪人、白川昌宏、田畑泰彦、木村祐、近藤輝幸、青山安宏、山東信介
    • Organizer
      第92回日本化学会春季年会
    • Place of Presentation
      慶応大学、横浜、神奈川
    • Year and Date
      2012-03-26
    • Related Report
      2012 Final Research Report
  • [Presentation] 安定同位元素を集積化した生体適合性高分子プローブの合成と多重共鳴 NMR 法による機能評価2012

    • Author(s)
      山田久嗣
    • Organizer
      第2回CSJ Festa
    • Place of Presentation
      東京工業大学大岡山キャンパス
    • Related Report
      2012 Annual Research Report
  • [Presentation] 高感度多重共鳴 NMR に向けた安定同位体ラベル化高分子タグの開発2012

    • Author(s)
      山田久嗣
    • Organizer
      第6回バイオ関連化学シンポジウム
    • Place of Presentation
      北海道大学高等教育推進機構
    • Related Report
      2012 Annual Research Report
  • [Presentation] 安定同位体ラベル化高分子タグの合成と多重共鳴 NMR 法による機能評価2012

    • Author(s)
      山田久嗣
    • Organizer
      第7回日本分子イメージング学会学術集会
    • Place of Presentation
      アクトシティ浜松
    • Related Report
      2012 Annual Research Report
  • [Presentation] 基質/代謝物選択的NMRを応用した生体内代謝プロセスの直接追跡と薬剤活性のその場評価2012

    • Author(s)
      山田久嗣、水澤圭吾、五十嵐龍二、杤尾豪人、白川昌宏、田畑泰彦、木村祐、近藤輝幸、青山安宏、山東信介
    • Organizer
      第92回日本化学会春季年会
    • Place of Presentation
      慶応大学日吉-矢上キャンパス
    • Related Report
      2011 Research-status Report
  • [Presentation] Direct In Situ Monitoring of Pyrimidine Catabolism and Its Inhibition Using Triple Resonance NMR Analysis2011

    • Author(s)
      Yamada, H.; Mizusawa, K.; Igarashi, R.; Tochio, H.; Shirakawa, M.; Tabata, Y.; Kimura, Y.; Kondo, T.; Aoyama, Y.; Sando, S
    • Organizer
      38thInternational Symposium on Nucleic Acids Chemistry
    • Place of Presentation
      Hokkaido Univ., Sapporo, Japan
    • Year and Date
      2011-11-10
    • Related Report
      2012 Final Research Report
  • [Presentation] Direct In Situ Monitoring of Pyrimidine Catabolism and Its Inhibition Using Triple Resonance NMR Analysis2011

    • Author(s)
      Yamada, H.; Mizusawa, K.; Igarashi, R.; Tochio, H.; Shirakawa, M.; Tabata, Y.; Kimura, Y.; Kondo, T.; Aoyama, Y.; Sando, S.
    • Organizer
      38th International Symposium on Nucleic Acids Chemistry
    • Place of Presentation
      Clark Memorial Student Center, Hokkaido Univ., Sapporo, Japan
    • Related Report
      2011 Research-status Report
  • [Presentation] 多重共鳴NMRを応用した生体内代謝プロセスの直接追跡と薬剤活性のその場評価2011

    • Author(s)
      山田久嗣、水澤圭吾、五十嵐龍二、杤尾豪人、白川昌宏、田畑泰彦、木村祐、近藤輝幸、山東信介、青山安宏
    • Organizer
      第5回バイオ関連化学シンポジウム
    • Place of Presentation
      つくば国際会議場「エポカルつくば」、つくば
    • Related Report
      2011 Research-status Report
  • [Presentation] 多重共鳴NMR法を用いた生体内代謝プロセスの直接追跡2011

    • Author(s)
      山田久嗣、水澤圭吾、五十嵐龍二、杤尾豪人、白川昌宏、田畑泰彦、木村祐、近藤輝幸、山東信介、青山安宏
    • Organizer
      第6回日本分子イメージング学会学術集会
    • Place of Presentation
      神戸国際会議場、神戸
    • Related Report
      2011 Research-status Report
  • [Book] 生体内代謝プロセスの多重共鳴 NMR モニタリングと多重共鳴 MRI に展開可能な高感度化分子プローブの開発2012

    • Author(s)
      山田久嗣
    • Publisher
      日本化学会 生体機能関連化学部会
    • Related Report
      2012 Final Research Report
  • [Book] 生体内代謝プロセスの多重共鳴 NMR モニタリングと多重共鳴 MRI に展開可能な高感度化分子プローブの開発2012

    • Author(s)
      山田久嗣
    • Publisher
      (公社)日本化学会 生体機能関連化学部会 日本化学会 生体機能関連化学部会 ニュースレター
    • Related Report
      2012 Annual Research Report
  • [Remarks]

    • URL

      http://www.probe.abe.kyoto-u.ac.jp/

    • Related Report
      2012 Final Research Report
  • [Patent(Industrial Property Rights)] 多核多重核磁気共鳴画像化方法2013

    • Inventor(s)
      近藤輝幸、青山安宏、山田久嗣、今井宏彦、高山裕生、長谷川嘉則、木村祐、杤尾豪人、白川昌宏、杉原文徳、年光昭夫、松田哲也、山東信介
    • Industrial Property Rights Holder
      近藤輝幸、青山安宏、山田久嗣、今井宏彦、高山裕生、長谷川嘉則、木村祐、杤尾豪人、白川昌宏、杉原文徳、年光昭夫、松田哲也、山東信介
    • Industrial Property Number
      2013-045724
    • Filing Date
      2013-03-07
    • Related Report
      2012 Final Research Report
  • [Patent(Industrial Property Rights)] 多核多重核磁気共鳴画像化方法2013

    • Inventor(s)
      山田久嗣 他
    • Industrial Property Rights Holder
      山田久嗣 他
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2013-045724
    • Filing Date
      2013-03-07
    • Related Report
      2012 Annual Research Report
  • [Patent(Industrial Property Rights)] 重合体、前記重合体を用いた核磁気共鳴分析用または磁気共鳴イメージング用の造影剤、化合物、前記重合体を用いた核磁気共鳴分析方法および磁気共鳴イメージング方法2012

    • Inventor(s)
      近藤輝幸、青山安宏、山田久嗣、長谷川嘉則、杤尾豪人、木村祐、白川昌宏、杉原文徳、松田哲也、山東信介、南昌人、山内文生、矢野哲哉、都築英寿
    • Industrial Property Rights Holder
      近藤輝幸、青山安宏、山田久嗣、長谷川嘉則、杤尾豪人、木村祐、白川昌宏、杉原文徳、松田哲也、山東信介、南昌人、山内文生、矢野哲哉、都築英寿
    • Industrial Property Number
      2012-118061
    • Filing Date
      2012-05-23
    • Related Report
      2012 Final Research Report
  • [Patent(Industrial Property Rights)] 重合体、前記重合体を用いた核磁気共鳴分析用または磁気共鳴イメージング用の造影剤、化合物、前記重合体を用いた核磁気共鳴分析方法および磁気共鳴イメージング方法2012

    • Inventor(s)
      山田久嗣 他
    • Industrial Property Rights Holder
      山田久嗣 他
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2012-118061
    • Filing Date
      2012-05-23
    • Related Report
      2012 Annual Research Report

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Published: 2011-08-05   Modified: 2019-07-29  

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