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Analysis of shiga-toxin resistance systemin enterohemorrhagic E. coli

Research Project

Project/Area Number 23790478
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Bacteriology (including Mycology)
Research InstitutionUniversity of Miyazaki

Principal Investigator

OGURA Yoshitoshi  宮崎大学, フロンティア科学実験総合センター, 助教 (40363585)

Project Period (FY) 2011 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2012: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Fiscal Year 2011: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywords病原性 / 腸管出血性大腸菌 / 志賀毒素
Research Abstract

Major virulence factor of enterohemorrhagic E. coliis shiga toxin (Stx) which inhibits protein synthesis of the host cell by depurinating a specific adenine residue of 28S rRNA. The E. coli K-12 also exhibits growth defect by introduction and expression of Stx. However O157 strain is resistant to Stx. In this study, from the analysis of O157 fosmid clones which confer Stx resistance to K-12, three genomic regions of O157 genome related to the Stx resistance were identified.

Report

(3 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Research-status Report
  • Research Products

    (34 results)

All 2013 2012 2011

All Journal Article (21 results) (of which Peer Reviewed: 18 results) Presentation (10 results) Book (3 results)

  • [Journal Article] Transcriptomic analysis of four developmental stages of Strongyloides venezuelensis2013

    • Author(s)
      Nagayasu E, Ogura Y, Itoh T, Yoshida A, Chakraborty G, Hayashi T, Maruyama H
    • Journal Title

      Parasitology International

      Volume: 62(1) Issue: 1 Pages: 57-65

    • DOI

      10.1016/j.parint.2012.09.006

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] A human outbreak case associated with Escherichia albertii2013

    • Author(s)
      T. Ooka, E. Tokuoka, M. Fukuhara, T. Nagamura, Y. Ogura, K. Aisawa, S. Harada, T. Hayashi
    • Journal Title

      Emerg. Infect. Dis.

      Volume: 19 Issue: 1 Pages: 144-146

    • DOI

      10.3201/eid1901.120646

    • URL

      http://dx.doi.org/

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Complete genome sequence of a Propionibacterium acnes isolate from a sarcoidosis patient.2013

    • Author(s)
      Minegishi K, Aikawa C, Furukawa A, Watanabe T, Nakano T, Ogura Y, Ohtsubo Y, Kurokawa K, Hayashi T, Maruyama F, Nakagawa I, Eishi Y
    • Journal Title

      Genome Announcement

      Volume: 1 Issue: 1 Pages: 16-12

    • DOI

      10.1128/genomea.00016-12

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Complete Genome Sequence of a Propionibacterium acnes Isolate from a Sarcoidosis Patient2013

    • Author(s)
      K. Minegishi, C. Aikawa, A. Furukawa, T. Watanabe, T. Nakano, Y. Ogura, Y. Ohtsubo, K. Kurokawa, T. Hayashi, F. Maruyama, I. Nakagawa, Y. Eishi
    • Journal Title

      Genome Announc.

      Volume: 1 Pages: 1-1

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Detection of diverse aquatic microbes in blood and organs of drowning victims : First metagenomic approach using high-throughput 454-pyrosequencing2012

    • Author(s)
      Kakizaki E, et al
    • Journal Title

      Forensic Science International

      Volume: (in press) Issue: 1-3 Pages: 135-146

    • DOI

      10.1016/j.forsciint.2012.02.010

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] A sensitive and simple plaque formation method for the Stx2 phage of Escherichia coliO157:H7, which does not form plaques in the standard plating procedure2012

    • Author(s)
      Md. R. Islam, Y. Ogura, Md. Asdulghani, T. Ooka, K. Murase, Y. Gotoh, T. Hayashi
    • Journal Title

      Plasmid

      Volume: 67(3) Pages: 227-235

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Complete genome sequence of Helicobacter cinaedi strain PAGU611, isolated in a case of human bacteremia2012

    • Author(s)
      Goto T, et al
    • Journal Title

      J Bacteriol

      Volume: 194 Issue: 14 Pages: 3744-3745

    • DOI

      10.1128/jb.00645-12

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Hemolysin E- and enterohemolysin-derived hemolytic activity of O55/O157 strains and other Escherichia coli lineages2012

    • Author(s)
      K.Murase, et al
    • Journal Title

      Microbiology

      Volume: 158 Issue: 3 Pages: 746-758

    • DOI

      10.1099/mic.0.054775-0

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Clinical significance of Escherichia albertii2012

    • Author(s)
      T. Ooka, K. Seto, K. Kawano, H. Kobayashi, Y. Etoh, S. Ichihara, A. Kaneko, J. Isobe, K. Yamaguchi, K. Horikawa, T.A.T. Gomes, A. Linden, M. Bardiau, J. Mainil, L. Beutin, Y. Ogura, T. Hayashi
    • Journal Title

      Emerg. Infect. Dis

      Volume: 18(3) Pages: 488-492

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Is bile acid a determinant of the gut microbiota on a high-fat diet?2012

    • Author(s)
      A. Yokota, S. Fukiya, T. Ooka, Y. Ogura, T. Hayashi, S. Ishizuka
    • Journal Title

      Gut Microbes

      Volume: 3(5) Issue: 5 Pages: 455-459

    • DOI

      10.4161/gmic.21216

    • URL

      http://dx.doi.org/

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Whole-Genome Sequence of the Hypervirulent Clinical Strain Mycobacterium intracellulare M.i.198.2012

    • Author(s)
      Tateishi, Y., S. Kitada, K. Miki, R. Maekura, Y. Ogura, Y. Ozeki, Y. Nishiuchi, M. Niki, T. Hayashi, K. Hirata, K. Kobayashi, and S. Matsumoto.
    • Journal Title

      Journal of Bacteriology

      Volume: 194 Issue: 22 Pages: 6336-6336

    • DOI

      10.1128/jb.01439-12

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] 腸管出血性大腸菌O111の進化と病原性2012

    • Author(s)
      小椋義俊, 大岡唯祐, 林哲也
    • Journal Title

      神経内科

      Volume: 76(2) Pages: 155-163

    • Related Report
      2012 Final Research Report
  • [Journal Article] 腸管出血性大腸菌における病原性のゲノム進化2012

    • Author(s)
      小椋義俊, 林哲也
    • Journal Title

      感染・炎症・免疫

      Volume: 42 Pages: 182-195

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
  • [Journal Article] 腸管出血性大腸菌O111の進化と病原性2012

    • Author(s)
      小椋義俊, 大岡唯祐, 林哲也
    • Journal Title

      神経内科

      Volume: 76 Pages: 155-163

    • Related Report
      2012 Annual Research Report
  • [Journal Article] Bile Acid is a Host Factor that Regulates the Composition of the Cecal Microbiota in Rats2011

    • Author(s)
      Islam KBMS, Fukiya S, Hagio M, Fujii N, Ishizuka S, Ooka T, Ogura Y, Hayashi T, Yokota A
    • Journal Title

      Gastroenterology

      Volume: VOL. 141 Issue: 5 Pages: 1773-1781

    • DOI

      10.1053/j.gastro.2011.07.046

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Wide distribution of O157-antigen biosynthesis gene clusters 1 in Escherichia coli2011

    • Author(s)
      A.Iguchi, et al
    • Journal Title

      PLoS ONE

      Volume: 6 Issue: 8 Pages: e23250-e23250

    • DOI

      10.1371/journal.pone.0023250

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] The Lifestyle of the Segmented Filamentous Bacterium : A Non-Culturable Gut-Associated Immunostimulating Microbe Inferred by Whole-Genome Sequencing2011

    • Author(s)
      Kuwahara T, et al
    • Journal Title

      DNA Research

      Volume: 18 Issue: 4 Pages: 291-303

    • DOI

      10.1093/dnares/dsr022

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Characterisation of the Porphyromonas gingivalis conjugative transposon CTnPg1 : determination of the integration site and the genes essential for conjugal transfer2011

    • Author(s)
      M.Naito, et al
    • Journal Title

      Microbiology

      Volume: 157 Issue: 7 Pages: 2022-2032

    • DOI

      10.1099/mic.0.047803-0

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] IS621-based multiplex PCR printing method of O26 enterohaemorrhagic and enteropathogenic Escherichia coli isolated from humans and cattle2011

    • Author(s)
      J.G.Mainil, et al
    • Journal Title

      J.Appl.Microbiol.

      Volume: 111 Issue: 3 Pages: 773-786

    • DOI

      10.1111/j.1365-2672.2011.05089.x

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] The genome of Erysipelothrix rhusiopathiae, the causative agent of swine erysipelas, reveals new insights into the evolution of Firmicutes and the organism's intracellular adaptations2011

    • Author(s)
      Y.Ogawa, et al
    • Journal Title

      J.Bacteriol.

      Volume: 193 Issue: 12 Pages: 2959-2971

    • DOI

      10.1128/jb.01500-10

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Genome sequence of photobacterium mandapamensis strain svers. 1.1, the bioluminescent symbiont of the cardinal fish siphamia versicolor2011

    • Author(s)
      H.Urbanczyk, et al
    • Journal Title

      J.Bacteriol.

      Volume: 193 Issue: 12 Pages: 3144-3145

    • DOI

      10.1128/jb.00370-11

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Presentation] 高解像度系統解析による腸管出血性大腸菌O157のStx2高産生性系統の同定2013

    • Author(s)
      小椋義俊, Md Rakibul Islam, 真子俊博, 大岡唯祐, 大西真, 林哲也
    • Organizer
      第86回日本細菌学会総会
    • Place of Presentation
      千葉
    • Related Report
      2012 Annual Research Report 2012 Final Research Report
  • [Presentation] 腸管出血性大腸菌O26におけるゲノムアダプテーション解析2013

    • Author(s)
      小椋義俊, 桂啓介, 伊藤武彦, Mainil Jacques , 吉野修司, 磯部順子, 勢戸和子, 江藤良樹, 黒木真理子, 木全恵子, 前田詠里子, 後藤恭宏, 大岡唯祐, 林哲也
    • Organizer
      第7回日本ゲノム微生物学会年会
    • Place of Presentation
      長浜
    • Related Report
      2012 Annual Research Report 2012 Final Research Report
  • [Presentation] O157 Stx2 phageの包括的ゲノム比較・機能解析により明らかとなったStx2高産生型phagenの存在2012

    • Author(s)
      小椋義俊, Md. Rakibul Islam, 真子俊博, 大岡唯祐, 大西真, 林哲也
    • Organizer
      第16回腸管出血性大腸菌感染症研究会
    • Place of Presentation
      秋田
    • Related Report
      2012 Annual Research Report 2012 Final Research Report
  • [Presentation] Comparative genomics of Stx2 prophages in O157:H72012

    • Author(s)
      Y. Ogura, T. Mako, T. Ooka, M. Ohnishi, T. Hayashi
    • Organizer
      VTEC 2012: 8^th International Symposium on Shiga Toxin (Verocytotoxin) producing Escherichia coli infections
    • Place of Presentation
      Amsterdam, The Netherlands.
    • Related Report
      2012 Final Research Report
  • [Presentation] 既存のソフトウエアを駆使した実験研究者による微生物ゲノム情報解析2012

    • Author(s)
      小椋義俊
    • Organizer
      第85回日本細菌学会総会
    • Place of Presentation
      長崎
    • Related Report
      2012 Final Research Report
  • [Presentation] 腸管侵入性大腸菌のゲノム解析2012

    • Author(s)
      小椋義俊,大岡唯祐,磯部順子,河野喜美子, 松本昌門, 勢戸和子, 岩出義人,緒方喜久代, 林哲也
    • Organizer
      第6回日本ゲノム微生物学会年会
    • Place of Presentation
      東京
    • Related Report
      2012 Final Research Report
  • [Presentation] Comparative genomics of Stx2 prophages in O157:H72012

    • Author(s)
      Y. Ogura, T. Mako, T. Ooka, M. Ohnishi, T. Hayashi
    • Organizer
      8th International Symposium on Shiga Toxin (Verocytotoxin) producing Escherichia coli infections
    • Place of Presentation
      Amsterdam
    • Related Report
      2012 Annual Research Report
  • [Presentation] ゲノム解析から見えてきた腸管出血性大腸菌の病原性進化メカニズム2011

    • Author(s)
      小椋義俊
    • Organizer
      日本細菌学会関東支部・ICD制度協議会共催「緊急セミナー:腸管出血性大腸菌の今」
    • Place of Presentation
      東京
    • Year and Date
      2011-08-02
    • Related Report
      2012 Final Research Report
  • [Presentation] Comparative analysis of STX2 prophages in enterohemorrhagic Escherichia coli O-1572011

    • Author(s)
      Y. O g u r a, M. Ohnishi, T. Mako, K. Kawano, T. Ooka, T. Hayashi
    • Organizer
      UMS 2011(第84回日本細菌学会総会)
    • Place of Presentation
      Sapporo
    • Related Report
      2012 Final Research Report
  • [Presentation] 腸管出血性大腸菌O157の志賀毒素ファージの比較解析2011

    • Author(s)
      小椋義俊
    • Organizer
      第5回細菌学若手コロッセウム
    • Place of Presentation
      高知
    • Related Report
      2012 Final Research Report
  • [Book] 第4章 新規ゲノム配列決定編2012

    • Author(s)
      小椋義俊, 林哲也
    • Total Pages
      252
    • Publisher
      細菌ゲノム. 細胞工学別冊 次世代シークエンサー 目的別アドバンストメソッド, 監修 菅野純夫/鈴木穣
    • Related Report
      2012 Final Research Report
  • [Book] 細胞工学別冊 次世代シークエンサー 目的別アドバンスドメソッド2012

    • Author(s)
      小椋義俊, 林哲也
    • Total Pages
      252
    • Publisher
      秀潤社
    • Related Report
      2012 Annual Research Report
  • [Book] 病原菌と常在菌の境界(第6 章腸内共生系の破綻と疾病)2011

    • Author(s)
      小椋義俊, 林哲也
    • Total Pages
      292
    • Publisher
      丸善出版
    • Related Report
      2012 Final Research Report

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Published: 2011-08-05   Modified: 2019-07-29  

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