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Next generation molecular ecology of contrasting adaptive strategies in flowering plants

Research Project

Project/Area Number 24247005
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Ecology/Environment
Research InstitutionKyushu University

Principal Investigator

YAHARA Tetsukazu  九州大学, 理学(系)研究科(研究院), 教授 (90158048)

Co-Investigator(Kenkyū-buntansha) SUYAMA Yoshihisa  東北大学, 農学研究科, 准教授 (60282315)
TACHIDA Hidenori  九州大学, 大学院理学研究院, 教授 (70216985)
TESHIMA Kosuke  九州大学, 大学院理学研究院, 助教 (20447593)
MIMURA Makiko  玉川大学, 農学部, 准教授 (60451689)
Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥46,280,000 (Direct Cost: ¥35,600,000、Indirect Cost: ¥10,680,000)
Fiscal Year 2014: ¥5,850,000 (Direct Cost: ¥4,500,000、Indirect Cost: ¥1,350,000)
Fiscal Year 2013: ¥18,720,000 (Direct Cost: ¥14,400,000、Indirect Cost: ¥4,320,000)
Fiscal Year 2012: ¥21,710,000 (Direct Cost: ¥16,700,000、Indirect Cost: ¥5,010,000)
Keywords分子生態学 / 次世代シークエンサー / ゲノム / 花色 / 葉の寿命 / Hemerocallis / Rubus / Taraxacum / 繁殖戦略 / 種分化 / アントシアニン / 進化 / 交雑 / 外来種 / 無性生殖 / 耐病性遺伝子
Outline of Final Research Achievements

Using Next Generation Sequencer, we analyzed genetic backgrounds of evolutionary changes between two pairs of sister species with contrasting adaptive strategies: Hemerocallis fulva and H. citrina having swallowtail-pollinated red flowers and hawkmoth-pollinated yellow flowers, and Rubus palmaus and R. grayanus having deciduous and evergreen leaves. In the Hemerocallis pair, we identified a group of genes of Anthocyanin color-pigments biosynthesis in which expression levels are correlated with the amounts of Anthocyanin color-pigments. This finding supported that changes in a regulatory system of Anthocyanin biosynthesis caused the evolution of flower color. In the Rubus pair, we found that a gene suppressing the receptor of red light (phytochrome) is highly differentiated between species. This finding suggests that divergence of evergreen/deciduous leaves were driven by regulatory changes of a light receptor.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • Research Products

    (13 results)

All 2015 2014 2013 2012 Other

All Journal Article (9 results) (of which Peer Reviewed: 9 results,  Acknowledgement Compliant: 2 results) Presentation (4 results)

  • [Journal Article] Difference in flowering time can initiate speciation of nocturnally flowering species.2015

    • Author(s)
      Matsumoto, T., Yasumoto, A. A., Nitta, K., Hirota, K. S., Yahara, T., Tachida, H.
    • Journal Title

      Journal of Theoretical Biology

      Volume: 370 Pages: 61-71

    • DOI

      10.1016/j.jtbi.2015.01.036

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] A genome-wide AFLP replacement in a hybrid population derived from two closely related Viola species from contrasting habitats.2014

    • Author(s)
      Toyama H, Kamiyama T, Yahara T.
    • Journal Title

      Plant Systematics & Evolution

      Volume: 301 Issue: 4 Pages: 1073-1084

    • DOI

      10.1007/s00606-014-1137-2

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Demographic history of a common pioneer tree, Zanthoxylum ailanthoides, reconstructed using isolation-with-migration model.2014

    • Author(s)
      Yoshida T, Tamekuni M, Yahara T, Inomata, Tachida H.
    • Journal Title

      Tree Genetics & Genomes

      Volume: 5 Issue: 5 Pages: 1213-1222

    • DOI

      10.1007/s11295-014-0755-8

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Formation of a hybrid triploid agamosperm on a sexual diploid plant : evidence from progeny tests in Taraxacum platycarpum Dahlst2014

    • Author(s)
      Chika Mitsuyuki・Akihiko Hoya・Hiroyuki Shibaike・Mikio Watanabe・Tetsukazu Yahara
    • Journal Title

      Plant Systematics and Evolution

      Volume: 300 Issue: 5 Pages: 863-870

    • DOI

      10.1007/s00606-013-0925-4

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Pollinator-Mediated Selection on Flower Color, Flower Scent and Flower Morphology of Hemerocallis: Evidence from Genotyping Individual Pollen Grains On the Stigma2013

    • Author(s)
      Hirota SK, Nitta K, Suyama Y, Kawakubo N, Yasumoto AA, Yahara T.
    • Journal Title

      PLoS ONE

      Volume: 8 Issue: 12 Pages: e85601-e85601

    • DOI

      10.1371/journal.pone.0085601

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Directional selection for early flowering is imposed by a re-associated herbivore - but no evidence of directional evolution2013

    • Author(s)
      Fukano Y, Tanaka K, Yahara T.
    • Journal Title

      Basic and Applied Ecology

      Volume: 14 Issue: 5 Pages: 387-395

    • DOI

      10.1016/j.baae.2013.05.009

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Difference in flowering time as an isolating barrier.2013

    • Author(s)
      Matsumoto T, Yasumoto AA, Nitta K, Yahara T and Tachida H
    • Journal Title

      Journal of Theoretical Biology

      Volume: 317 Pages: 161-167

    • DOI

      10.1016/j.jtbi.2012.10.001

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Changes in defense of an alien plant Ambrosia artemislifolia before and after the invasion of a native specialist enemy Ophraella co〓2012

    • Author(s)
      Yuya Fukano, Tetsukazu Yahara
    • Journal Title

      PLoS ONE

      Volume: 11 Issue: 11 Pages: e49114-e49114

    • DOI

      10.1371/journal.pone.0049114

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Relative role of flower color and scent on pollinator attraction : experimental tests using F1 and F2 hybrids of davlity and nightlily2012

    • Author(s)
      Shun K. Hirota, et al.
    • Journal Title

      PLoS ONE

      Volume: 7 Issue: 6 Pages: e39010-e39010

    • DOI

      10.1371/journal.pone.0039010

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Presentation] 薄暮性および夜行性スズメガによる花形質への選好性2015

    • Author(s)
      廣田峻・矢原徹一
    • Organizer
      第62回日本生態学会大会
    • Place of Presentation
      鹿児島大学
    • Year and Date
      2015-03-21
    • Related Report
      2014 Annual Research Report
  • [Presentation] 受粉花粉の直接遺伝解析に基づくアゲハチョウを介した送粉パターンの解明

    • Author(s)
      廣田峻,新田梢,陶山佳久,安元暁子,矢原徹一
    • Organizer
      日本生態学会
    • Place of Presentation
      広島
    • Related Report
      2013 Annual Research Report
  • [Presentation] 気候変動による種の接触と浸透交雑

    • Author(s)
      三村真紀子,矢原徹一
    • Organizer
      日本生態学会
    • Place of Presentation
      広島
    • Related Report
      2013 Annual Research Report
  • [Presentation] タンポポ耐病性遺伝子(R-gene)の種間、集団間変異

    • Author(s)
      満行 知花, 矢原 徹一
    • Organizer
      日本生態学会
    • Place of Presentation
      広島
    • Related Report
      2013 Annual Research Report

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Published: 2013-05-15   Modified: 2019-07-29  

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