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Investigating the result for emergence of flexible enzyme stereospecificity

Research Project

Project/Area Number 24570247
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Evolutionary biology
Research InstitutionUniversity of Tsukuba

Principal Investigator

SHIMADA Akihiko  筑波大学, 生命環境系, 講師 (90235614)

Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥5,460,000 (Direct Cost: ¥4,200,000、Indirect Cost: ¥1,260,000)
Fiscal Year 2014: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2013: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2012: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywordsトリプトファナーゼ / D-セリン / リン酸トリアンモニウム / ホモキラリティーの起原 / D-セリン / リン酸アンモニウム / 立体選択性 / リン酸3アンモニウム(TAP) / 光学分割 / DL-セリン
Outline of Final Research Achievements

Generally speaking, D-amino acids are inert to enzyme. Tryptophanase with absolute enantioselectivity is also inactive on D-serine. However it conversely turns around to active substrate in the presence of concentrate triammoniumphosphate. This reaction is mysterious because enzyme enantioselectivity is absolutely constant in enzymological common sense. Thereby this research, Grant-in-Aid for Scientific Research (C), was programed to figure out its reaction mechanism. It turned out that the flexible enantioselectivity was ascribed to the process of enzyme-D-serine complex formation in the presence of triammonium phosphate.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • 2012 Research-status Report
  • Research Products

    (11 results)

All 2016 2015 2014 2013 2012 Other

All Journal Article (5 results) (of which Peer Reviewed: 4 results,  Open Access: 1 results) Presentation (5 results) (of which Invited: 1 results) Book (1 results)

  • [Journal Article] Ammonium phosphates-producing flexible tryptophanase stereoselectivity2015

    • Author(s)
      Ikumi Otsuka, Akihiko Shimada
    • Journal Title

      Origins of Life and Evolution of Biospheres

      Volume: in press

    • Related Report
      2014 Annual Research Report
  • [Journal Article] 3No homochirality-no life2014

    • Author(s)
      Akihiko Shimada
    • Journal Title

      Viva Origino

      Volume: 40 Pages: 40-46

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] No homochirality - no life2014

    • Author(s)
      島田秋彦
    • Journal Title

      Viva Origino

      Volume: 40 Pages: 40-46

    • NAID

      130008137649

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] No homochirality-no life2013

    • Author(s)
      Akihiko Shimada
    • Journal Title

      Viva Origino

      Volume: 印刷中

    • NAID

      130008137649

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Flexible enantioselectivity of tryptophanase attributable to benzene ring in heterocyclic moiety of D-tryptophan2012

    • Author(s)
      Akihiko Shimada and Haruka Ozaki
    • Journal Title

      Life

      Volume: 2 Issue: 2 Pages: 215-228

    • DOI

      10.3390/life2020215

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Presentation] Flexible tryptophanase stereoselectivity induced from triammoniumphosphate2014

    • Author(s)
      Ikumi Otsuka, Akihiko Shimada
    • Organizer
      2nd International Conference of D-Amino Acid Research
    • Place of Presentation
      栃木県総合文化センター、宇都宮市
    • Year and Date
      2014-09-04
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Ammonium phosphates-producing flexible tryptophanase stereoselectivity2014

    • Author(s)
      Ikumi Otsuka, Shimada A.
    • Organizer
      Origins2014
    • Place of Presentation
      奈良県新公会堂、奈良市
    • Year and Date
      2014-07-08
    • Related Report
      2014 Annual Research Report
  • [Presentation] トリプトファナーゼの立体選択性に 立体反応的影響を及ぼす塩の探索

    • Author(s)
      大塚郁美、平野絢子、島田秋彦
    • Organizer
      生命の起原および進化学会
    • Place of Presentation
      広島修道大学
    • Related Report
      2013 Research-status Report
  • [Presentation] トリプトファナーゼによるL-セリンからのトリプトファン合成反応に対するD-セリンの阻害作用

    • Author(s)
      平野絢子、島田秋彦
    • Organizer
      生命の起原および進化学会
    • Place of Presentation
      九州大学
    • Related Report
      2012 Research-status Report
  • [Presentation] ペンタクロロフェノール分解能を有する土壌細菌の探索とその進化的意義

    • Author(s)
      中畑 涼、島田秋彦
    • Organizer
      生命の起原および進化学会
    • Place of Presentation
      九州大学
    • Related Report
      2012 Research-status Report
  • [Book] New Developments in Tryptophan Research2016

    • Author(s)
      Akihiko Shimada, Ikumi Otsuka
    • Publisher
      Nova Science Publishers
    • Related Report
      2014 Annual Research Report

URL: 

Published: 2013-05-31   Modified: 2019-07-29  

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