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Screening for the genes which shows synergistic phenotype with MYCN-With the aim of new molecular target of neuroblastoma

Research Project

Project/Area Number 24590376
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Pathological medical chemistry
Research InstitutionAichi Cancer Center Research Institute

Principal Investigator

MURAKAMI-TONAMI Yuko  愛知県がんセンター(研究所), 分子腫瘍学部, 主任研究員 (70405174)

Co-Investigator(Kenkyū-buntansha) KADOMATSU Kenji  名古屋大学, 大学院医学系研究科・生物化学講座分子生物学, 教授 (80204519)
Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥5,460,000 (Direct Cost: ¥4,200,000、Indirect Cost: ¥1,260,000)
Fiscal Year 2014: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2013: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2012: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywords神経芽腫 / 合成致死 / DNA損傷修復 / MYCN / DNA損傷応答
Outline of Final Research Achievements

We identified SMC2, a subunit of condensin complex, as a candidate gene which shows synergistic lethal phenotype with MYCN amplification/overexpression. In addition, we found SMC2 regulates expression of DNA repair genes cooperation with MYCN (Cell Cycle, 13 (7) : 1115-31, 2014). To find further candidate genes, we screened for the genes which showed synthetic lethal phenotype with MYCN overexpression using shRNA library in neuroblastoma cells. We also improved the method of discovering combinational interactions using survival data (Bioinformatics, 29 (23) : 3053-59, 2013).

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • 2012 Research-status Report
  • Research Products

    (12 results)

All 2015 2014 2013 2012 Other

All Journal Article (4 results) (of which Peer Reviewed: 4 results,  Open Access: 3 results,  Acknowledgement Compliant: 1 results) Presentation (7 results) (of which Invited: 1 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] The nucleolar protein PES1 is a marker of neuroblastoma outcome and is associated with neuroblastoma differentiation.2015

    • Author(s)
      Nakaguro M, Kiyonari S, Kishida S, Cao D, Murakami-Tonami Y, Ichikawa H, Takeuchi I, Nakamura S, Kadomatsu K
    • Journal Title

      Cancer Science

      Volume: 106 Issue: 3 Pages: 237-243

    • DOI

      10.1111/cas.12598

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Regulation of wee1(+) expression during meiosis in fission yeast.2014

    • Author(s)
      Murakami-Tonami Y, Ohtsuka H, Aiba H, Murakami H.
    • Journal Title

      Cell Cycle.

      Volume: 13 Issue: 18 Pages: 2853-2858

    • DOI

      10.4161/15384101.2014.946807

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Inactivation of SMC2 shows a synergistic lethal response in MYCN-amplified neuroblastoma cells.2014

    • Author(s)
      Murakami-Tonami Y, Kishida S, Takeuchi I, Katou Y, Maris JM, Ichikawa H, Kondo Y, Sekido Y, Shirahige K, Murakami H, Kadomatsu K.
    • Journal Title

      Cell Cycle.

      Volume: 13 Issue: 7 Pages: 1115-1131

    • DOI

      10.4161/cc.27983

    • Related Report
      2014 Annual Research Report 2013 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Discovering combinatorial interactions in survival data2013

    • Author(s)
      David duVerle, Ichiro Takeuchi, Yuko Murakami-Tonami, Kenji kadomatsu, Koji Tsuda
    • Journal Title

      Bio in formatics

      Volume: 23 Issue: 23 Pages: 3053-3059

    • DOI

      10.1093/bioinformatics/btt532

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Presentation] SGO1はMYCNがん遺伝子増幅細胞においてDNA損傷応答を制御する2014

    • Author(s)
      村上(渡並)優子
    • Organizer
      日本分子生物学会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2014-11-26
    • Related Report
      2014 Annual Research Report
  • [Presentation] MYCN増幅と合成致死表現型を示す遺伝子の探索~神経芽腫をモデルとして2014

    • Author(s)
      村上(渡並)優子
    • Organizer
      日本薬学会東海支部特別講演会
    • Place of Presentation
      金城学院大学薬学部
    • Year and Date
      2014-07-16
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Inactivation of SMC2 shows a synergistic lethal response in MYCN-amplified neuroblastoma cells.2014

    • Author(s)
      Yuko Murakami-Tonami
    • Organizer
      Advances in Neuroblastoma Research Congress
    • Place of Presentation
      ケルン(ドイツ)
    • Year and Date
      2014-05-15
    • Related Report
      2014 Annual Research Report
  • [Presentation] Inactivation of Smc2 shows synergistic lethal response to MYCN amplification by regulating DNA damage response genes transcription in neuroblastoma cells.2013

    • Author(s)
      Yuko Murakami-Tonami
    • Organizer
      EMBO conference (The DNA damage response in cell physiology and disease)
    • Place of Presentation
      Cape Sounio(アテネ市、ギリシア)
    • Related Report
      2013 Research-status Report
  • [Presentation] SMC2はDNA損傷修復に関連する遺伝子の転写を制御する2013

    • Author(s)
      村上(渡並)優子
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸ポートアイランド(神戸市)
    • Related Report
      2013 Research-status Report
  • [Presentation] Inactivation of hSgo1 shows synthetic phenotype to MYCN amplification.

    • Author(s)
      Yuko Murakami-Tonami, Satoshi Kishida, Kenji Kadomatsu
    • Organizer
      Advances in neuroblastoma research conference 2012
    • Place of Presentation
      Fairmont Royal York Hotel(トロント)
    • Related Report
      2012 Research-status Report
  • [Presentation] Smc2はDNA修復因子の転写制御を介してMYCNとSyntheticな表現型を示す

    • Author(s)
      村上(渡並)優子、岸田聡、門松健治
    • Organizer
      第35回分子生物学会年会
    • Place of Presentation
      福岡国際会議場(福岡)
    • Related Report
      2012 Research-status Report
  • [Patent(Industrial Property Rights)] MYCN増幅型疾患のための分子標的およびその利用2012

    • Inventor(s)
      村上(渡並)優子、門松健治
    • Industrial Property Rights Holder
      名古屋大学
    • Industrial Property Rights Type
      特許
    • Filing Date
      2012-05-01
    • Related Report
      2012 Research-status Report

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Published: 2013-05-31   Modified: 2019-07-29  

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