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Sensitive detection of hepatitis E virus (HEV) using TaqMan RT-PCR and surveillance for HEV infection in Hokkaido, Japan

Research Project

Project/Area Number 24590825
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Public health/Health science
Research InstitutionHokkaido Institute of Public Health

Principal Investigator

ISHIDA SETSUKO  北海道立衛生研究所, 感染症部ウイルスG, 主幹 (70414315)

Co-Investigator(Kenkyū-buntansha) YOSHIZUMI Shima  北海道立衛生研究所, 感染症センター感染症部, 主査(腸管系ウイルス) (90414317)
GOTO Akiko  北海道立衛生研究所, 感染症センター感染症部, 研究職員 (60414322)
NAGANO Hideki  北海道立衛生研究所, 企画総務部, 企画情報グループ主幹 (30189146)
Co-Investigator(Renkei-kenkyūsha) MIYOSHI Masahiro  北海道立衛生研究所, 感染症センター感染症部, 主査(ウイルス感染症) (50414321)
KOMAGOME Rika  北海道立衛生研究所, 感染症センター感染症部, 研究職員 (40414312)
Research Collaborator MATSUBAYASHI Keiji  北海道ブロック血液センター, 品質部 (90533323)
Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥5,330,000 (Direct Cost: ¥4,100,000、Indirect Cost: ¥1,230,000)
Fiscal Year 2014: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2013: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2012: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
KeywordsE型肝炎ウイルス / 疫学 / 診断 / 分子疫学 / E型肝炎ウイルス / ウイルス検出
Outline of Final Research Achievements

A TaqMan RT-PCR was developed to detect and classify genotypes of hepatitis E virus (HEV). We analyzed a collection of serum samples previously confirmed HEV infection by RT-PCR. The TaqMan RT-PCR showed equivalent detection rates compared with the conventional RT-PCR.
The annual reported number of HEV infection in Japan increased twice as many since 2012 compared to those in 2004-2011 temporally coincident with the start of use of anti-HEV IgA assay. On the other hand the number of cases of HEV infection in Hokkaido has decreased gradually since 2013. Twelve strains from clinical samples those were collected between December in 2011 and December in 2013 in near regions in Hokkaido showed clustering with high similarity approximately 99-100% identity. In addition, these HEV strains were closely related to strains those were detected successively from patients in the same region in 2009.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • 2012 Research-status Report
  • Research Products

    (8 results)

All 2014 2013 2012 Other

All Journal Article (7 results) (of which Peer Reviewed: 6 results,  Open Access: 2 results) Presentation (1 results) (of which Invited: 1 results)

  • [Journal Article] Epidemiology and Laboratory Diagnoses of Rubella in Hokkaido District during the Nationwide Outbreak in Japan, 2011–20132014

    • Author(s)
      Miyoshi M, Komagome R, Ishida S, Nagano H, Okano M
    • Journal Title

      Japanese Journal of Infectious Diseases

      Volume: 67 Issue: 6 Pages: 479-484

    • DOI

      10.7883/yoken.67.479

    • NAID

      130004712742

    • ISSN
      1344-6304, 1884-2836
    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Recent Progress toward Measles Elimination in Hokkaido, Japan, during 2011–20122014

    • Author(s)
      Miyoshi M, Komagome R, Ishida S, Kikuchi M, Sato H, Ito H, Nagano H, Okano M
    • Journal Title

      Japanese Journal of Infectious Diseases

      Volume: 67 Issue: 4 Pages: 311-314

    • DOI

      10.7883/yoken.67.311

    • NAID

      130004757103

    • ISSN
      1344-6304, 1884-2836
    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 道央地域におけるE型肝炎ウイルス同一系統株による連続した事例について2013

    • Author(s)
      石田勢津子, 吉澄志磨, 後藤明子, 長野秀樹
    • Journal Title

      北海道立衛生研究所所報

      Volume: 63 Pages: 95-97

    • NAID

      40020073023

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] E型肝炎ウイルス(HEV)の検出と分子疫学的解析ー北海道内の環境由来検体、推定HEV保有動物およびヒト臨床検体について2013

    • Author(s)
      石田勢津子, 吉澄志磨, 池田徹也、三好正浩、後藤明子、松林圭二、池田久實
    • Journal Title

      北海道公衆衛生学雑誌

      Volume: 27 Pages: 25-28

    • Related Report
      2013 Research-status Report
  • [Journal Article] E型肝炎の現況と北海道におけるウイルス保有状況調査2013

    • Author(s)
      石田勢津子, 吉澄志磨, 後藤明子, 長野秀樹
    • Journal Title

      北海道公衆衛生学雑誌

      Volume: 27 Pages: 45-51

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Genomic characterization of echovirus 6 causing aseptic meningitis in Hokkaido, Japan: a novel cluster in the nonstructural protein coding region of human enterovirus B2013

    • Author(s)
      Miyoshi M, Komagome R, Ishida S, Nagano H, Takahashi K, Okano M
    • Journal Title

      Archives of Virology

      Volume: 158 Issue: 4 Pages: 775-784

    • DOI

      10.1007/s00705-012-1535-0

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Detection and molecular characterization of hepatitis E virus in clinical, environmental and putative animal sources2012

    • Author(s)
      Ishida S, Yoshizumi S, Ikeda T, Miyoshi M, Goto A, Matsubayashi K, Ikeda H
    • Journal Title

      Archives of Virology

      Volume: 157 Issue: 12 Pages: 2363-2368

    • DOI

      10.1007/s00705-012-1422-8

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Presentation] 4類感染症届出からみた道内E型肝炎の現況、及び環境中のHEV検出について

    • Author(s)
      石田勢津子
    • Organizer
      北海道E型肝炎研究会第7回学術集会
    • Place of Presentation
      札幌コンベンションセンター( 北海道札幌市)
    • Related Report
      2013 Research-status Report
    • Invited

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Published: 2013-05-31   Modified: 2019-07-29  

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