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Genomic alterations and molecular diversity of chimeric genes in hematologic malignancies

Research Project

Project/Area Number 24591407
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Hematology
Research InstitutionKyoto Prefectural University of Medicine

Principal Investigator

TAKI Tomohiko  京都府立医科大学, 医学(系)研究科(研究院), 講師 (50322053)

Co-Investigator(Kenkyū-buntansha) KAWAMURA Machiko  公益財団法人東京都医学研究所, 研究員 (80450592)
Project Period (FY) 2012-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥5,330,000 (Direct Cost: ¥4,100,000、Indirect Cost: ¥1,230,000)
Fiscal Year 2014: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2013: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2012: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywordsがん / ゲノム / キメラ遺伝子 / 非コード遺伝子 / リボゾーム遺伝子 / PVT1 / NSMCE2 / RNAシーケンス / RN28S1 / BCL11B / IGK / COG1 / キメラ転写産物
Outline of Final Research Achievements

Noncoding gene, PVT1 was frequently rearranged in multiple myeloma, and the PVT1-WWOX was identified in RPMI8226 cell line. We further identified another fusion transcript of PVT1, PVT1-NSMCE2, in acute myeloid leukemia (AML) having highly genomic amplification with 8q24. Novel fusion partner of PVT1, NSMCE2, also created BF104016-NSMCE2 fusion transcript in an AML cell line. On the other hand, we identified another type of fusion transcript involving ribosomal DNA. Three fusion transcripts involving RN28S1 were identified in T-cell acute lymphoblastic leukemia, Burkitt lymphoma, and multiple myeloma, respectively. Further analysis is needed to clarify the role of these novel types of fusion transcript in tumorigenesis.

Report

(4 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • 2012 Research-status Report
  • Research Products

    (33 results)

All 2015 2014 2013 2012

All Journal Article (15 results) (of which Peer Reviewed: 15 results,  Acknowledgement Compliant: 2 results,  Open Access: 4 results) Presentation (18 results)

  • [Journal Article] Identification of SPAG9 as a novel JAK2 fusion partner gene in pediatric acute lymphoblastic leukemia with t(9;17)(p24;q21).2015

    • Author(s)
      Kawamura M, Taki T, Kaku H, Ohki K, Hayashi Y
    • Journal Title

      Genes Chromosomes Cancer

      Volume: 印刷中 Issue: 7 Pages: 401-408

    • DOI

      10.1002/gcc.22251

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] 8q24 amplified segments involve novel fusion genes between NSMCE2 and long noncoding RNAs in acute myelogenous leukemia.2014

    • Author(s)
      Chinen Y, Sakamoto N, Nagoshi H, Taki T, Maegawa S, Tatekawa S, Tsukamoto T, Mizutani S, Shimura Y, Yamamoto-Sugitani M, Kobayashi T, Matsumoto Y, Horiike S, Kuroda J, Taniwaki M.
    • Journal Title

      J Hematol Oncol

      Volume: 7 Issue: 1 Pages: 68-68

    • DOI

      10.1186/s13045-014-0068-2

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] EVI1 overexpression is a poor prognostic factor in pediatric patients with mixed lineage leukemia-AF9 rearranged acute myeloid leukemia.2014

    • Author(s)
      Matsuo H, Kajihara M, Tomizawa D, Watanabe T, Saito AM, Fujimoto J, Horibe K, Kodama K, Tokumasu M, Itoh H, Nakayama H, Kinoshita A, Taga T, Tawa A, Taki T, Shiba N, Ohki K, Hayashi Y, Yamashita Y, Shimada A, Tanaka S, Adachi S.
    • Journal Title

      Haematologica

      Volume: 99 Issue: 11 Pages: 225-227

    • DOI

      10.3324/haematol.2014.107128

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Prognostic implications of CEBPA mutations in pediatric acute myeloid leukemia: a report from the Japanese Pediatric Leukemia/Lymphoma Study Group.2014

    • Author(s)
      Matsuo H, Kajihara M, Tomizawa D, Watanabe T, Saito AM, Fujimoto J, Horibe K, Kodama K, Tokumasu M, Itoh H, Nakayama H, Kinoshita A, Taga T, Tawa A, Taki T, Tanaka S, Adachi S.
    • Journal Title

      Blood Cancer J

      Volume: 4 Issue: 7 Pages: e226-e226

    • DOI

      10.1038/bcj.2014.47

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Loss of NDRG2 expression activates PI3K-AKT signalling via PTEN phosphorylation in ATLL and other cancers.2014

    • Author(s)
      Nakahata S, Ichikawa T, Maneesaay P, Saito Y, Nagai K, Tamura T, Manachai N, Yamakawa N, Hamasaki M, Kitabayashi I, Arai Y, Kanai Y, Taki T, Abe T, Kiyonari H, Shimoda K, Ohshima K, Horii A, Shima H, Taniwaki M, Yamaguchi R, Morishita K.
    • Journal Title

      Nat Commun

      Volume: in press Issue: 1 Pages: 3393-3393

    • DOI

      10.1038/ncomms4393

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Prognostic impact of gained chromosomes in high-hyperdiploid childhood acute lymphoblastic leukaemia2014

    • Author(s)
      Kato M, Imamura T, Manabe A, Hashii Y, Koh K, Sato A, Takahashi H, Hori H, Taki T, Inoue M, Hayashi Y, Horibe K, Tsuchida M, Kojima S, Oda M, Ohara A .
    • Journal Title

      Br J Haematol

      Volume: 166 Issue: 2 Pages: 295-298

    • DOI

      10.1111/bjh.12836

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Identification of novel fusion genes with 28S ribosomal DNA in hematologic malignancies.2014

    • Author(s)
      Kobayashi S, Taki T, Nagoshi H, Chinen Y, Yokokawa Y, Kanegane H, Matsumoto Y, Kuroda J, Horiike S, Nishida K, Taniwaki M.
    • Journal Title

      Int J Oncol

      Volume: 44 Issue: 4 Pages: 1193-1198

    • DOI

      10.3892/ijo.2014.2291

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] The leucine twenty homeobox (LEUTX) gene, which lacks a histone acetyltransferase domain, is fused to KAT6A in therapy-related AML with t(8;19)(p11;q13).2014

    • Author(s)
      Chinen Y, Taki T, Tsutsumi Y, Kobayashi S, Matsumoto Y, Sakamoto N, Kuroda J, Horiike S, Nishida K, Ohno H, Uike N, Taniwaki M.
    • Journal Title

      Genes Chromosomes Cancer

      Volume: 53 Issue: 4 Pages: 299-308

    • DOI

      10.1002/gcc.22140

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] WT1 mutation in pediatric patients with acute myeloid leukemia: A study of the Japanese Childhood AML Cooperative Study Group2013

    • Author(s)
      Sano H, Shimada A, Tabuchi K, Taki T, Murata C, Park M, Sotomatsu Tawa A, Kobayashi R, Horibe K, Tsuchida M, Hanada R, Tsukimoto I, Hayashi Y
    • Journal Title

      Int J Hematol

      Volume: 98 Issue: 4 Pages: 437-445

    • DOI

      10.1007/s12185-013-1409-6

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] CD56 expression is an independent prognostic factor for relapse in acute myeloid leukemia with t(8;21).2013

    • Author(s)
      Iriyama N, Hatta Y, Takeuchi J, Ogawa Y, Ohtake S, Sakura T, Mitani K, Ishida F, Takahashi M, Maeda T, Izumi T, Sakamaki H, Miyawaki S, Honda S, Miyazaki Y, Taki T, Taniwaki M, Naoe T.
    • Journal Title

      Leuk Res

      Volume: 37 Issue: 9 Pages: 1021-1026

    • DOI

      10.1016/j.leukres.2013.05.002

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Deletion or methylation of CDKN2A/2B and PVT1 rearrangement occur frequently in highly aggressive B-cell lymphomas harboring 8q24 abnormality.2013

    • Author(s)
      Tsutsumi Y, Chinen Y, Sakamoto N, Nagoshi H, Nishida K, K, Yokokawa Y, Taki T, Sasaki N, Yamamoto-Sugitani M, Kobayashi T, Matsumoto Y, Horiike S, Kuroda J, Taniwaki M
    • Journal Title

      Leuk Lymphoma

      Volume: 未定

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] NUP98-NSD1 related gene expression signature is strongly associated with a poor prognosis in pediatric acute myeloid leukemia: a study of the Japanese Childhood AML Cooperative Study Group Cooperative Study Group2013

    • Author(s)
      Shiba N, Ichikawa H, Taki T, Park M, Jo A, Mitani S, Shimada A, Sotomatsu M, Arakawa H, Tabuchi K, Adachi S, Tawa A, Horibe K, Tsuchida M, Hanada R, Tsukimoto I, Hayashi Y
    • Journal Title

      Genes Chromosomes Cancer

      Volume: 52 Issue: 7 Pages: 683-693

    • DOI

      10.1002/gcc.22064

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] High WT1 mRNA expression after induction chemotherapy and FLT3-ITD have prognostic impact in pediatric acute myeloid leukemia: a study of the Japanese Childhood AML Cooperative Study Group2012

    • Author(s)
      Shimada A, Taki T, Koga D, Tabuchi K, Tawa A, Hanada R, Tsuchida M, Horibe K, Tsukimoto I, Adachi S, Kojima S, Hayashi Y
    • Journal Title

      Int J Hematol

      Volume: 96 Issue: 4 Pages: 469-476

    • DOI

      10.1007/s12185-012-1163-1

    • NAID

      10031126738

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Frequent PVT1 rearrangement and novel chimeric genes PVT1-NBEA and PVT1-WWOX occur in multiple myeloma with 8q24 abnormality.2012

    • Author(s)
      Nagoshi H, Taki T, Hanamura I, Nitta M, Otsuki T, Nishida K, Okuda K, Sakamoto N, Kobayashi S, Yamamoto-Sugitani M, Tsutsumi Y, Kobayashi T, Matsumoto Y, Horiike S, Kuroda J, Taniwaki M
    • Journal Title

      Cancer Res

      Volume: 72 Pages: 4954-4962

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Clinical characteristics and outcome of refractory/relapsed myeloid leukemia in children with Down syndrome.2012

    • Author(s)
      Taga T, Adachi S, et al.
    • Journal Title

      Blood

      Volume: 120 Issue: 9 Pages: 1810-1815

    • DOI

      10.1182/blood-2012-03-414755

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Presentation] 卵巣胚細胞腫から発症した急性骨髄性白血病のゲノム解析2014

    • Author(s)
      犬飼岳史, 滝 智彦, 根本 篤, 赤羽 弘資, 合井久美子, 黒田 格, 廣瀬衣子, 阿部正子, 加賀美恵子, 杉田完爾
    • Organizer
      第56回日本小児血液・がん学会学術集会
    • Place of Presentation
      岡山
    • Year and Date
      2014-11-28 – 2014-11-30
    • Related Report
      2014 Annual Research Report
  • [Presentation] PVT1-NSMCE2 fusion gene enhances BCL-XL expression and drug resistance in leukemic cells.2014

    • Author(s)
      Yoshiaki Chinen, Natsumi Sakamoto, Hisao Nagoshi, Tomohiko Taki, Satoru Kobayashi, Kazuhiro Nishida, Saori Maegawa, Miki Kiyota, Shinsuke Mizutani, Yuji Shimura, Mio Sugitani, Tsutomu Kobayashi, Yosuke Matsumoto, Shigeo Horiike, Junya Kuroda, Masafumi Taniwaki
    • Organizer
      第76回日本血液学会学術集会
    • Place of Presentation
      大阪
    • Year and Date
      2014-10-31 – 2014-11-02
    • Related Report
      2014 Annual Research Report
  • [Presentation] The prognostic impact of high EVI1-related genes expression in pediatric acute myeloid leukemia.2014

    • Author(s)
      Norio Shiba, Yusuke Hara, Kentaro Ohki, Genki Yamato, Myoung-Ja Park, Tohru Kobayashi, Hitoshi Ichikawa, Daisuke Tomizawa, Tomohiko Taki, Akira Shimada, Manabu Sotomatsu, Hirokazu Arakawa, Keizo Horibe, Souichi Adachi, Akio Tawa, Yasuhide Hayashi
    • Organizer
      第76回日本血液学会学術集会
    • Place of Presentation
      大阪
    • Year and Date
      2014-10-31 – 2014-11-02
    • Related Report
      2014 Annual Research Report
  • [Presentation] 遺伝子の外側での切断による融合遺伝子の形成2013

    • Author(s)
      知念良顕、滝 智彦、小林 覚、坂元奈津美、名越久朗、西田一弘、鵜池直邦、谷脇雅史
    • Organizer
      第72回日本癌学会学術総会
    • Place of Presentation
      横浜
    • Related Report
      2013 Research-status Report
  • [Presentation] Successful treatment of congenital AML with t(8;16)(p11;p13) by minimal chemotherapy.2013

    • Author(s)
      Kagehiro Kozuki, Itaru Kato, Tomoo Daifu, Katsutsugu Umeda, Hidefumi Hiramatsu, Ken-Ichiro Watanabe, Ichiro Kamiy, Tomohiko Taki, Tatsutoshi Nakahata, Toshio Heike, Souichi Adachi.
    • Organizer
      第75回日本血液学会学術集会
    • Place of Presentation
      札幌
    • Related Report
      2013 Research-status Report
  • [Presentation] A diversity of cases in AML with promyelocytic differentiation: A report from JPLSG.2013

    • Author(s)
      Hiroyuki Takahashi, Hiromichi Matsushita, Akitoshi Kinoshita, Tomohiko Taki, Takao Deguchi, Nobutaka Kiyokawa, Yoshiko Hashii, Yasuhide Hayashi, Daisuke Tomizawa, Takashi Taga, Akio Tawa, Soichi Adachi, Miharu Yabe, Hayao Miyachi.
    • Organizer
      第75回日本血液学会学術集会
    • Place of Presentation
      札幌
    • Related Report
      2013 Research-status Report
  • [Presentation] Chemotherapy prior to HSCT is beneficial for pediatric TAEB/RAEB-T.2013

    • Author(s)
      Akira Shimada, Akitoshi Kinoshita, Atsushi Manabe, Miharu Yabe, Hayato Miyachi, Hiromichi Matsushita, Tomohiko Taki, Masami Inoue, Daisuke Hasegawa, Asahito Hama, Masafumi Ito, Akio Tawa, Seiji Kojima, Souichi Adachi.
    • Organizer
      第75回日本血液学会学術集会
    • Place of Presentation
      札幌
    • Related Report
      2013 Research-status Report
  • [Presentation] Clonal heterogeneity and evolution of acute myeloid leukemia during disease progression.2013

    • Author(s)
      Rika Kihara, Hideaki Hoshino, Kotaro Suzuki, Fangli Chen, Takahiro Kato, Syuichi Miyawaki, Norio Asou, Tomohiko Taki, Masafumi Taniwaki, Tomoki Naoe, Hitoshi Kiyoi.
    • Organizer
      第75回日本血液学会学術集会
    • Place of Presentation
      札幌
    • Related Report
      2013 Research-status Report
  • [Presentation] NUP98-NSD1 gene fusion is a strong poor prognostic factor in pediatric AML.2013

    • Author(s)
      Yusuke Hara, Norio Shiba, Hitoshi Ichikawa, Tomohiko Taki, Akira Shimada, Kauko Kudo, Daisuke Tomizawa, Takashi Taga, Souichi Adachi, Hirokazu Arakawa, Akio Tawa, Yasuhide Hayashi.
    • Organizer
      第75回日本血液学会学術集会
    • Place of Presentation
      札幌
    • Related Report
      2013 Research-status Report
  • [Presentation] Double investigation of the clinical significance of CEBPA mutation in child AML: The JPLSG AML-05 study.2013

    • Author(s)
      Hidemasa Matsuo, Mio Kajihara, Daisuke Tomizawa, Tomoyuki Watanabe, Akiko Moriya Saito, Junichiro Fujimoto, Keizo Horibe, Mayu Tokumasu, Hiroshi Itoh, Hideki Nakayama, Akitoshi Kinoshita, Takashi Taga, Akio Tawa, Tomohiko Taki, Souichi Adachi.
    • Organizer
      第75回日本血液学会学術集会
    • Place of Presentation
      札幌
    • Related Report
      2013 Research-status Report
  • [Presentation] 急性リンパ性白血病に対する維持療法中に発症したランゲルハンス組織球症におけるクローナリティの解析2012

    • Author(s)
      横川裕一, 滝 智彦, 秋山政晴, 小林 覚,名越久朗,知念良顕, 井田博幸,谷脇雅史
    • Organizer
      第71回日本癌学会学術総会
    • Place of Presentation
      札幌
    • Related Report
      2012 Research-status Report
  • [Presentation] 8q24異常をもつ多発性骨髄腫におけるPVT1とWWOXの新規融合遺伝子の同定2012

    • Author(s)
      名越久朗, 滝 智彦, 西田一弘, 坂元奈津美,小林 覚,知念良顕,横川裕一,杉谷未央,古林 勉, 松本洋典, 黒田純也,堀池重夫, 谷脇雅史
    • Organizer
      第71回日本癌学会学術総会
    • Place of Presentation
      札幌
    • Related Report
      2012 Research-status Report
  • [Presentation] 造血器腫瘍における28SリボゾームDNAが関与する新しいタイプの融合遺伝子の同定2012

    • Author(s)
      小林 覚, 滝 智彦, 名越久朗,知念良顕, 横川裕一,金兼弘和,松本洋典, 黒田純也, 堀池重夫, 西田一弘, 谷脇雅史
    • Organizer
      第71回日本癌学会学術総会
    • Place of Presentation
      札幌
    • Related Report
      2012 Research-status Report
  • [Presentation] Novel chimeric gene of PVT1 with WWOX in multiple myeloma with 8q24 abnormality.2012

    • Author(s)
      Nagoshi H, Taki T, Nishida K, Sakamoto N, Kuroda J, Kobayashi S, Chinen Y, Yokokawa Y, Sugitani M, Kobayashi T, Matsumoto Y, Horiike S, Taniwaki M
    • Organizer
      第74回日本血液学会学術集会
    • Place of Presentation
      京都
    • Related Report
      2012 Research-status Report
  • [Presentation] Clonality in T-ALL and Langerhans cell histiocytosis cells by TCR rearrangement and NOTCH1 mutation2012

    • Author(s)
      Yokokawa Y, Taki T, Akiyama M, Kobayashi S, Nagoshi H, Chinen Y, Ida H, Taniwaki M
    • Organizer
      第74回日本血液学会学術集会
    • Place of Presentation
      京都
    • Related Report
      2012 Research-status Report
  • [Presentation] Identification of novel fusion genes with 28S ribosomal DNA in hematologic malignancies.2012

    • Author(s)
      Satoru Kobayashi, Tomohiko Taki, Hisao Nagoshi, Yoshiaki Chinen, Yuichi Yokokawa, Hirokazu Kanegane, Yosuke Matsumoto, Junya Kuroda, Shigeo Horiike, Kazuhiro Nishida, Masafumi Taniwaki
    • Organizer
      第74回日本血液学会学術集会
    • Place of Presentation
      京都
    • Related Report
      2012 Research-status Report
  • [Presentation] 急性リンパ性白血病に対する維持療法中に発症したランゲルハンス組織球症におけるクローナリティの解析2012

    • Author(s)
      横川裕一, 滝 智彦, 秋山政晴, 山岡正慶, 横井健太郎, 湯坐有希, 谷脇雅史, 井田博幸
    • Organizer
      第54回日本小児血液・がん学会学術集会
    • Place of Presentation
      横浜
    • Related Report
      2012 Research-status Report
  • [Presentation] Identification of the Novel Chimeric Gene, PVT1-WWOX, in Multiple Myeloma with 8q24 Abnormality2012

    • Author(s)
      Nagoshi H, Taki T, Nishida K, Kuroda J, Chinen Y, Kobayashi S, Yokokawa Y, Yamamoto-Sugitani M, Kobayashi T, Matsumoto Y, Horiike S, Taniwaki M
    • Organizer
      54th Annual Meeting of the American Society of Hematology
    • Place of Presentation
      Atlanta
    • Related Report
      2012 Research-status Report

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Published: 2013-05-31   Modified: 2019-07-29  

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