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Mechanism of resistance to osmotic stress by translation inhibitors

Research Project

Project/Area Number 24658066
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeSingle-year Grants
Research Field Applied microbiology
Research InstitutionHirosaki University

Principal Investigator

HYOUTA Himeno  弘前大学, 農学生命科学部, 教授 (80208785)

Co-Investigator(Renkei-kenkyūsha) MUTO Akira  弘前大学, 農学生命科学部, 研究員 (80034635)
Project Period (FY) 2012-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2013: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Fiscal Year 2012: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywords翻訳阻害剤 / 塩ストレス / 浸透圧ストレス / リボソーム / 翻訳 / シグマE / ppGpp
Research Abstract

Effects of various kinds of drugs on Escherichia coli cell were examined and we found inhibitors of protein synthesis such as chloramphenicol, kasgamycin or tetracycline increase resistance to osmotic (salt) stress. By using qRT-PCR, we also found that these protein synthesis inhibitors prematurely and transiently activate these membrane-related sigma factor, sigma E.
Resistance to osmotic (salt) stress is also provided by serine hydroxamate, which produces ppGpp. We finally found that there are two pathways for salt resistance, ppGpp-dependent and ppGpp-independent pathways.

Report

(3 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • Research Products

    (29 results)

All 2014 2013 2012 Other

All Journal Article (8 results) (of which Peer Reviewed: 6 results,  Open Access: 1 results,  Acknowledgement Compliant: 1 results) Presentation (16 results) (of which Invited: 1 results) Book (3 results) Remarks (2 results)

  • [Journal Article] Mechanism of trans-translation revealed by in vitro studies.2014

    • Author(s)
      Himeno, H., Kurita, D. & Muto, A.
    • Journal Title

      Frontiers in Microbiology

      Volume: 5 Pages: 1-11

    • DOI

      10.3389/fmicb.2014.00065

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] tmRNA-mediated trans-translation as the major ribosome rescue system in a bacterial cell.2014

    • Author(s)
      Himeno, H., Kurita, D. & Muto, A.
    • Journal Title

      Frontiers Genet.

      Volume: 5 Pages: 66-74

    • DOI

      10.3389/fgene.2014.00066

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM and general features of the assembly process.2013

    • Author(s)
      Guo, Q., Goto, S., Chen, Y., Feng, B., Xu, Y., Muto, A., Himeno, H., Deng, H., Lei, J., Gao, N.
    • Journal Title

      Nucleic Acids Res.

      Volume: 41 Issue: 4 Pages: 2609-2620

    • DOI

      10.1093/nar/gks1256

    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] GTPases involved in bacterial ribosome maturation2013

    • Author(s)
      Goto, S., Muto, A., Himeno, H
    • Journal Title

      J. Biochem.

      Volume: 未定 Issue: 5 Pages: 403-414

    • DOI

      10.1093/jb/mvt022

    • NAID

      40019646739

    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] 2つの機能を有する tmRNAによる細菌の翻訳解消システム2013

    • Author(s)
      姫野俵太、栗田大輔、武藤昱
    • Journal Title

      実験医学

      Volume: Vol.31,No.7 Pages: 54-60

    • Related Report
      2013 Final Research Report
  • [Journal Article] Impairment of ribosome maturation or function confers salt resistance on Escherichia coli cells.2013

    • Author(s)
      Hase, Y., Tarusawa, T., Muto, A. & Himeno, H.
    • Journal Title

      PLoS ONE

      Volume: 8(5) Issue: 5 Pages: e65747-e65747

    • DOI

      10.1371/journal.pone.0065747

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] 2つの機能を有するtmRNAによる細菌の翻訳解消システム2013

    • Author(s)
      姫野俵太、栗田大輔、武藤昱
    • Journal Title

      実験医学

      Volume: 31

    • Related Report
      2012 Research-status Report
  • [Journal Article] In vitro trans-translation assay.2012

    • Author(s)
      Kurita, D., Muto, A., Himeno, H.
    • Journal Title

      Methods in Molecular Biology

      Volume: 905 Pages: 311-325

    • DOI

      10.1007/978-1-61779-949-5_20

    • ISBN
      9781617799488, 9781617799495
    • Related Report
      2013 Final Research Report 2012 Research-status Report
    • Peer Reviewed
  • [Presentation] リボソームを介した浸透圧耐性機構2013

    • Author(s)
      樽澤武房、長谷要一、後藤史門、武藤あきら、姫野俵太
    • Organizer
      第2回リボソームミーティング
    • Place of Presentation
      東京
    • Related Report
      2013 Final Research Report 2012 Research-status Report
  • [Presentation] tmRNA/SmpBによる停滞したリボソームの認識機構2013

    • Author(s)
      栗田大輔、Mickey Miller、武藤あきら、Allen Buskirk、姫野俵太
    • Organizer
      第2回リボソームミーティング
    • Place of Presentation
      東京
    • Related Report
      2013 Final Research Report 2012 Research-status Report
  • [Presentation] GTPaseRsgAの機能と大腸菌リボソーム生合成の過程2013

    • Author(s)
      後藤史門、武藤あきら、姫野俵太
    • Organizer
      第10回21世紀大腸菌研究会
    • Place of Presentation
      修善寺
    • Related Report
      2013 Final Research Report
  • [Presentation] RsgA(リボソーム小サブユニット依存GTP加水分解酵素)の機能およびリボソームとの相互作用2013

    • Author(s)
      後藤史門、長谷要一、菊地岳志、栗田大輔、武藤昱、竹本千重、横山茂之、Sean R.Connell、Paola Fucini、姫野俵太
    • Organizer
      第15回日本RNA学会年会
    • Place of Presentation
      松山
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Presentation] Recognition of mRNA length on the ribosome by tmRNA andSmpB.2013

    • Author(s)
      Kurita, D., Miller, M.R., Muto, A., Buskirk, A.R., Himeno, H.
    • Organizer
      Ribosomes Conference 2013
    • Place of Presentation
      Napa Valley, California
    • Related Report
      2013 Final Research Report
  • [Presentation] tmRNA:non-coding RNAと coding RNAのハイブリッド2013

    • Author(s)
      姫野俵太、栗田大輔、武藤昱
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2013 Final Research Report
  • [Presentation] GTPase RsgAの機能と大腸菌リボソーム生合成の過程2013

    • Author(s)
      後藤史門、武藤あきら、姫野俵太
    • Organizer
      第10回大腸菌研究会
    • Place of Presentation
      修善寺
    • Related Report
      2013 Annual Research Report
  • [Presentation] Recognition of mRNA length on the ribosome by tmRNA and SmpB.2013

    • Author(s)
      Kurita, D., Miller, M.R., Muto, A., Buskirk, A.R., Himeno, H.
    • Organizer
      Ribosomes Conference 2013
    • Place of Presentation
      Napa Valley
    • Related Report
      2013 Annual Research Report
  • [Presentation] tmRNA:non-coding RNAとcoding RNAのハイブリッド2013

    • Author(s)
      姫野俵太、栗田大輔、武藤昱
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 細菌リボソーム30Sサブユニットの生合成に関与する因子群の機能2013

    • Author(s)
      後藤史門
    • Organizer
      第2回リボソームミーティング
    • Place of Presentation
      東京
    • Related Report
      2012 Research-status Report
  • [Presentation] Interplay of a GTPase and a ribosome-binding factor on the 30S subunit during a late stage of the bacterial ribosome biosynthesis.2012

    • Author(s)
      Goto, S., Muto, A., Himeno, H.
    • Organizer
      The 9th International Conference on RibosomeSynthesis
    • Place of Presentation
      Banff
    • Related Report
      2013 Final Research Report
  • [Presentation] The first translocation in trans-translation.2012

    • Author(s)
      Takada, K., Kurita, D., Naoe, C., Yokogawa, T., Himeno, H., Takemoto, C.
    • Organizer
      第14回日本RNA学会年会
    • Place of Presentation
      仙台
    • Related Report
      2013 Final Research Report
  • [Presentation] 線虫 SL1トランス.スプライシングは生殖細胞でより活発?2012

    • Author(s)
      加藤新、佐藤洋旭、高橋大輝、姫野俵太、武藤あきら、牛田千里
    • Organizer
      第14回日本RNA学会年会
    • Place of Presentation
      仙台
    • Related Report
      2013 Final Research Report
  • [Presentation] Interplay of a GTPase and a ribosome-binding factor on the 30S subunit during a late stage of the bacterial ribosome biosynthesis2012

    • Author(s)
      Goto, S.
    • Organizer
      The 9th International Conference on Ribosome Synthesis
    • Place of Presentation
      Banff
    • Related Report
      2012 Research-status Report
  • [Presentation] The first translocation in trans-translation2012

    • Author(s)
      Takada, K.
    • Organizer
      第14回日本RNA学会年会
    • Place of Presentation
      仙台
    • Related Report
      2012 Research-status Report
  • [Presentation] 線虫SL1トランス-スプライシングは生殖細胞でより活発?2012

    • Author(s)
      加藤新
    • Organizer
      第14回日本RNA学会年会
    • Place of Presentation
      仙台
    • Related Report
      2012 Research-status Report
  • [Book] 弘前大学知の散歩道2013

    • Author(s)
      姫野俵太
    • Total Pages
      9
    • Publisher
      弘前大学出版会
    • Related Report
      2013 Final Research Report 2012 Research-status Report
  • [Book] 生命分子を統合する RNAーその秘められた役割と制御機構2013

    • Author(s)
      姫野俵太、栗田大輔、武藤昱
    • Total Pages
      7
    • Publisher
      羊土社
    • Related Report
      2013 Final Research Report
  • [Book] 生命分子を統合するRNAーその秘められた役割と制御機構2013

    • Author(s)
      姫野俵太、栗田大輔、武藤昱
    • Total Pages
      7
    • Publisher
      羊土社
    • Related Report
      2013 Annual Research Report
  • [Remarks]

    • URL

      http://hirosaki-rna.org/himeno/

    • Related Report
      2013 Final Research Report
  • [Remarks] 弘前大学農学生命科学部分子生命科学科分子生物学研究室

    • URL

      http://hirosaki-rna.org/

    • Related Report
      2012 Research-status Report

URL: 

Published: 2013-05-31   Modified: 2019-07-29  

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