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Analysis for proteins related to temperature-compensation of plant clock

Research Project

Project/Area Number 24770042
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Plant molecular biology/Plant physiology
Research InstitutionNagoya University

Principal Investigator

NAKAMICHI Norihito  名古屋大学, WPI (理), 准教授 (90513440)

Project Period (FY) 2012-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2013: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Fiscal Year 2012: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords植物 / 蛋白質 / 概日時計 / 環境応答 / 国際情報交換
Research Abstract

Period length of circadian rhythm is about 24 hours under physiological temperature conditions. This property is called as Temperature compensation of circadian period. To understand this phenomenon in plant (Arabidopsis thaliana), we took genetic approach, and found genes related to temperature compensation. Mutants lacking genes showed 24 hour length period in low temperature, but very long period in high temperature. The genes encode transcription factors. We performed the ChIP-qPCR analysis to examine whether temperature changes alter the association between the transcription factors and target DNA. As a result, temperature changes altered association pattern of the transcription factors and target DNA, indicating that the transcription factors is temperature-sensitive. Further examination including target DNA of the transcription factors is needed to understand temperature compensation mechanism.

Report

(3 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • Research Products

    (28 results)

All 2014 2013 2012 Other

All Journal Article (16 results) (of which Peer Reviewed: 6 results) Presentation (9 results) Remarks (3 results)

  • [Journal Article] The LNK1 night light-inducible and clock-regulated gene is induced also in response to warm-night through the circadian clock nighttime repressor in Arabidopsis thaliana2014

    • Author(s)
      Takeshi Mizuno, Aya Takeuchi, Yuji Nomono, Norihito Nakamichi, Takafumi Yamashino
    • Journal Title

      Plant Signal Behav

      Volume: Vol. 9. pii

    • Related Report
      2013 Final Research Report
  • [Journal Article] Verification at the protein level of the PIF4-mediated external coincidence model for the temperature-adaptive photoperiodic control of plant growth in Arabidopsis thaliana2013

    • Author(s)
      Takafumi Yamashino, Yuji Nomono, Severine Lorrain, Miki Miyachi, Shogo Ito, Norihito Nakamichi, Christian Fankhauser, Takeshi Mizuno
    • Journal Title

      Plant Signal Behav

      Volume: Vol. 8

    • Related Report
      2013 Final Research Report
  • [Journal Article] Clock-controlled and FLOWERING LOCUS T (FT)-dependent photoperiodic pathway in Lotus japonicus I : verification of the flowering-associated function of an FT homolog2013

    • Author(s)
      Takafumi Yamashino, Saori Yamawaki, Emi Hagui, Hanayo Ueoka-Nakanishi, Norihito Nakamichi, Shogo Ito, Takeshi Mizuno
    • Journal Title

      Biosci Biotechnol Biochem

      Volume: 77 Pages: 747-753

    • NAID

      10031170713

    • Related Report
      2013 Final Research Report
  • [Journal Article] Clock-controlled and FLOWERING LOCUS T (FT)-dependent photoperiodic pathway in Lotus japonicus II : characterization of a microRNA implicated in the control of flowering time2013

    • Author(s)
      Takafumi Yamashino, Saori Yamawaki, Emi Hagui, Kai Ishida, Hanayo Ueoka-Nakanishi, Norihito Nakamichi, Takeshi Mizuno
    • Journal Title

      Biosci Biotechnol Biochem

      Volume: vol. 77(6) Pages: 1179-85

    • NAID

      10031184678

    • Related Report
      2013 Final Research Report
  • [Journal Article] Clock-controlled and FLOWERING LOCUS T (FT)-dependent photoperiodic pathway in Lotus japonicus II: characterization of a microRNA implicated in the control of flowering time.2013

    • Author(s)
      Yamashino T, Yamawaki S, Hagui E, Ishida K, Ueoka-Nakanishi H, Nakamichi N, Mizuno T.
    • Journal Title

      Biosci Biotechnol Biochem.

      Volume: 77 Pages: 1179-1185

    • NAID

      10031184678

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Clock-controlled and FLOWERING LOCUS T (FT)-dependent photoperiodic pathway in Lotus japonicus I: verification of the flowering-associated function of an FT homolog.2013

    • Author(s)
      Yamashino T, Yamawaki S, Hagui E, Ueoka-Nakanishi H, Nakamichi N, Ito S, Mizuno T.
    • Journal Title

      Biosci Biotechnol Biochem.

      Volume: 77 Pages: 747-753

    • NAID

      10031170713

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Verification at the protein level of the PIF4-mediated external coincidence model for the temperature-adaptive photoperiodic control of plant growth in Arabidopsis thaliana.2013

    • Author(s)
      Yamashino T, Nomoto Y, Lorrain S, Miyachi M, Ito S, Nakamichi N, Fankhauser C, Mizuno T.
    • Journal Title

      Plant Signal Behav.

      Volume: 8 Issue: 3 Pages: e23390-e23390

    • DOI

      10.4161/psb.23390

    • Related Report
      2013 Annual Research Report 2012 Research-status Report
  • [Journal Article] Transcriptional repressor PRR5 directly regulates clock-output pathways2012

    • Author(s)
      Norihito Nakamichi, Takatoshi Kiba, Mari Kamioka, Takamasa Suzuki, Takafumi Yamashino, Tetsuya Higashiyama, Hitoshi Sakakibara, Takeshi Mizuno
    • Journal Title

      Proc. Natl. Acad. Sci. USA.

      Volume: vol. 109(42) Pages: 17123-17128

    • Related Report
      2013 Final Research Report
  • [Journal Article] Circadian clock- and PIF4-controlled plant growth : a coincidence mechanism directly integrates a hormone signaling network into the photoperiodic control of plant architectures in Arabidopsis thaliana2012

    • Author(s)
      Yuji Nomoto, Saori Kubozono, Takafumi Yamashino, Norihito Nakamichi, Takeshi Mizuno
    • Journal Title

      Plant Cell Physiol

      Volume: vol. 53 Pages: 1950-1964

    • NAID

      10031127303

    • Related Report
      2013 Final Research Report
  • [Journal Article] A circadian clock- and PIF4-mediated double coincidence mechanism is implicated in the thermosensitive photoperiodic control of plant architectures in Arabidopsis thaliana2012

    • Author(s)
      Yuji Nomono, Saori Kunozono, Mari Miyachi, Takafumi Yamashino, Norihito Nakamichi, Takeshi Mizuno
    • Journal Title

      Plant Cell Physiol

      Volume: vol. 53 Pages: 1965-1973

    • NAID

      10031127304

    • Related Report
      2013 Final Research Report
  • [Journal Article] Molecular mechanisms of circadian rhythm in Lotus japonicus and Arabidopsis thaliana are sufficiently compatible to regulate heterologous core clock genes robustly2012

    • Author(s)
      Hanayo Ueoka-Nakanishi, Takafumi Yamahisno, Kai Ishida, Mari Kamioka, Norihito Nakamichi, Takeshi Mizuno
    • Journal Title

      Biosci Biotechnol Biochem

      Volume: vol. 76 Pages: 2332-2334

    • NAID

      10031146856

    • Related Report
      2013 Final Research Report
  • [Journal Article] Transcriptional repressor PRR5 directly regulates clock-output pathways.2012

    • Author(s)
      Nakamichi et. al.,
    • Journal Title

      PNAS

      Volume: 109 Issue: 42 Pages: 17123-17128

    • DOI

      10.1073/pnas.1205156109

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Circadian clock- and PIF4-controlled plant growth:2012

    • Author(s)
      Nomoto et al.,
    • Journal Title

      Plant Cell Physiol.

      Volume: 53 Issue: 11 Pages: 1950-1964

    • DOI

      10.1093/pcp/pcs137

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] A circadian clock- and PIF4-mediated double coincidence mechanism is implicated in the thermosensitive photoperiodic control of plant architectures in Arabidopsis.2012

    • Author(s)
      Nomoto et al.,
    • Journal Title

      Plant Cell Physiol.

      Volume: 53 Issue: 11 Pages: 1965-1973

    • DOI

      10.1093/pcp/pcs141

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Journal Article] Circadian clock and PIF4-mediated external coincidence mechanism coordinately integrates both of the cues from seasonal changes in photoperiod and temperature to regulate plant growth in Arabidopsis thaliana.2012

    • Author(s)
      Nomoto Y, Kubozono S, Miyachi M, Nakamichi N, Mizuno T, Yamashino T.
    • Journal Title

      Plant Signal Behav.

      Volume: 8 Pages: 2-2

    • Related Report
      2012 Research-status Report
  • [Journal Article] Molecular mechanisms of circadian rhythm in Lotus japonicus and Arabidopsis thaliana are sufficiently compatible to regulate heterologous core clock genes robustly.2012

    • Author(s)
      Ueoka-Nakanishi H, Yamashino T, Ishida K, Kamioka M, Nakamichi N, Mizuno T.
    • Journal Title

      Biosci Biotechnol Biochem.

      Volume: 76 Pages: 2332-2334

    • NAID

      10031146856

    • Related Report
      2012 Research-status Report
    • Peer Reviewed
  • [Presentation] 概日リズムに関わる転写制御ネットワークの発見2014

    • Author(s)
      中道範人
    • Organizer
      第55回日本植物生理学会年会
    • Place of Presentation
      富山
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Presentation] Circadian time information transmites to out-put pathways through PRR2013

    • Author(s)
      Norihto Nakamichi, Takatoshi Kiba, Mari Kamioka, Takamasa Suzuki, Takafumi Yamashino, Tetsuya Higashiyama, Hitoshi Sakakibara
    • Organizer
      第54回日本植物生理学会年会
    • Place of Presentation
      岡山
    • Related Report
      2013 Final Research Report
  • [Presentation] Identification of a transcription factor potentially regulates clock-regulated PSEUDO-RESPONSE REGULATOR 52013

    • Author(s)
      Mari Kamioka, Nobutaka Mitsuda, Chitose Yamamizo, Akemi Ohmiya, Takafumi Yamashino, Masaru Ohme-Takagi, Takeshi Mizuno,Norihito Nakamichi
    • Organizer
      第54回日本植物生理学会年会
    • Place of Presentation
      岡山
    • Related Report
      2013 Final Research Report
  • [Presentation] 概日時間情報はPRRタンパク質を介して出力系現象に伝達する2013

    • Author(s)
      中道範人、木羽隆敏、神岡真理、鈴木孝征、山篠貴史、東山哲也、榊原均、水野猛
    • Organizer
      第54回日本植物生理学会年会
    • Place of Presentation
      岡山
    • Related Report
      2012 Research-status Report
  • [Presentation] 概日時計に関連したPSEUDO-RESPONSE REGULATOR 5遺伝子の発現を制御する新規転写因子2013

    • Author(s)
      神岡真理、光田展隆、山溝千尋、大宮あけみ、山篠貴史、高木優、水野猛、中道範人
    • Organizer
      第54回日本植物生理学会年会
    • Place of Presentation
      岡山
    • Related Report
      2012 Research-status Report
  • [Presentation] Transcriptional repressor PSEUDO-RESPONSE REGULATOR 5 directly regulates clock output pathways2012

    • Author(s)
      Norihito Nakamichi, Takatoshi Kiba, Mari Kamioka, Takamasa Suzuki, Takafumi Yamashino, Tetsuya Higashiyama, Hitoshi Sakakibara, Takeshi Mizuno
    • Organizer
      23ed International Conference on Arabidopsis Research
    • Place of Presentation
      Vienna, Austria
    • Related Report
      2013 Final Research Report
  • [Presentation] ChIP-seq法による植物時計の出力系の遺伝子ネットワーク構造の解析2012

    • Author(s)
      中道範人、木羽隆俊、神岡真理、鈴木孝征、山篠貴史、東山哲也、榊原均、水野猛
    • Organizer
      第19回日本時間生物学会学術大会
    • Related Report
      2013 Final Research Report
  • [Presentation] ChIP-seq法による植物時計の出力系の遺伝子ネットワーク構造の解析2012

    • Author(s)
      中道範人、木羽隆敏、神岡真理、鈴木孝征、山篠貴史、東山哲也、榊原均、水野猛
    • Organizer
      第19回日本時間生物学会学術大会
    • Place of Presentation
      札幌
    • Related Report
      2012 Research-status Report
  • [Presentation] 機能的ゲノミクスによる高等植物の新規時計関連因子の探索2012

    • Author(s)
      神岡真理、光田展隆、山篠貴史、高木優、水野猛、中道範人
    • Organizer
      第19回日本時間生物学会学術大会
    • Place of Presentation
      札幌
    • Related Report
      2012 Research-status Report
  • [Remarks]

    • URL

      http://www.bio.nagoya-u.ac.jp/~plant4/index.html

    • Related Report
      2013 Final Research Report
  • [Remarks]

    • URL

      http://www.itbm.nagoya-u.ac.jp/

    • Related Report
      2013 Final Research Report
  • [Remarks] 名古屋大学 植物生理学グループ

    • URL

      http://www.bio.nagoya-u.ac.jp/~plant4/index.html

    • Related Report
      2013 Annual Research Report

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Published: 2013-05-31   Modified: 2019-07-29  

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