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Identification of the responsible gene for carnation bacterial wilt resistance

Research Project

Project/Area Number 24780038
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Horticulture/Landscape architecture
Research InstitutionNational Agriculture and Food Research Organization

Principal Investigator

YAGI Masafumi  独立行政法人農業・食品産業技術総合研究機構, 花き研究所花き研究領域, 主任研究員 (40391403)

Project Period (FY) 2012-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2013: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Fiscal Year 2012: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywordsカーネーション / 萎凋細菌病 / QTL / DNAマーカー / BACライブラリー / 病害抵抗性 / 連鎖地図
Research Abstract

'Karen Rouge' is the carnation cultivar with the bacterial wilt resistance derived from Dianthus capitatus ssp. andrzejowskianus. In order to identify the responsible gene for the resistance, we constructed a BAC (bacterial artificial chromosome) library using 'Karen Rouge' genomic DNA, whose coverage was estimated to be about 12 genome equivalents. By using this library, we determined the 91,790 nucleotide sequence surrounding the marker STS-WG44 that is tightly linked to the resistance, and identified six candidate genes for the resistance.

Report

(3 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Research-status Report
  • Research Products

    (6 results)

All 2014 2013

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (3 results)

  • [Journal Article] Identification of tightly linked SSR markers for flower type in carnation (Dianthus caryophyllus L.)2014

    • Author(s)
      Masafumi Yagi,Toshiya Yamamoto,Sachiko Isobe,Satoshi Tabata,Hideki Hirakawa,Hiroyasu Yamaguchi,Takashi Onozaki
    • Journal Title

      Euphytica

      Volume: 印刷中 Issue: 2 Pages: 175-183

    • DOI

      10.1007/s10681-014-1090-8

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Sequence Analysis of the Genome of Carnation (Dianthus caryophyllus L.)2013

    • Author(s)
      Masafumi Yagi, Shunichi Kosugi, Hideki Hirakawa et al.(他24名)
    • Journal Title

      DNA Research

      Volume: (Epub ahead of print) Issue: 3 Pages: 231-241

    • DOI

      10.1093/dnares/dst053

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Construction of a reference genetic linkage map for carnation (Dianthus caryophyllus L.)2013

    • Author(s)
      Masafumi Yagi, Toshiya Yamamoto, Sachiko Isobe, Hideki Hirakawa, Satoshi Tabata, Koji Tanase, Hiroyasu Yamaguchi, Takashi Onozaki
    • Journal Title

      BMC Genomics

      Volume: 14 Issue: 1 Pages: 734-734

    • DOI

      10.1186/1471-2164-14-734

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Presentation] カーネーションの標準連鎖地図の作成2013

    • Author(s)
      八木雅史、山本俊哉、磯部祥子、平川英樹、田畑哲之、棚瀬幸司、山口博康、小野崎隆
    • Organizer
      育種学会
    • Place of Presentation
      鹿児島大学
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Presentation] カーネーションの花型遺伝子座に連鎖したDNAマーカーの開発2013

    • Author(s)
      八木雅史、山本俊哉、磯部祥子、平川英樹、田畑哲之、棚瀬幸司、山口博康、小野崎隆
    • Organizer
      園芸学会
    • Place of Presentation
      岩手大学
    • Related Report
      2013 Final Research Report
  • [Presentation] カーネーションの花型遺伝子座に連鎖したSSRマーカーの開発2013

    • Author(s)
      八木雅史,山本俊哉,磯部祥子,平川英樹,田畑哲之,棚瀨幸司,山口博康,小野崎隆
    • Organizer
      園芸学会
    • Place of Presentation
      岩手大学
    • Related Report
      2013 Annual Research Report

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Published: 2013-05-31   Modified: 2019-07-29  

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