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Coevolution of primate diet and and gut microbiota

Research Project

Project/Area Number 25291100
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Ecology/Environment
Research InstitutionKyoto University

Principal Investigator

Hanya Goro  京都大学, 霊長類研究所, 准教授 (40444492)

Co-Investigator(Kenkyū-buntansha) 金森 朝子  京都大学, 霊長類研究所, 研究員 (20625074)
牛田 一成  京都府立大学, 生命環境科学研究科(系), 教授 (50183017)
松田 一希  京都大学, 霊長類研究所, 助教 (90533480)
Co-Investigator(Renkei-kenkyūsha) MURAYAMA Miho  京都大学, 野生動物研究センター, 教授 (60293552)
Project Period (FY) 2013-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥17,680,000 (Direct Cost: ¥13,600,000、Indirect Cost: ¥4,080,000)
Fiscal Year 2016: ¥3,380,000 (Direct Cost: ¥2,600,000、Indirect Cost: ¥780,000)
Fiscal Year 2015: ¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Fiscal Year 2014: ¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2013: ¥6,110,000 (Direct Cost: ¥4,700,000、Indirect Cost: ¥1,410,000)
Keywords霊長類 / 食性 / 腸内細菌 / 共進化 / 次世代シーケンス / 16S rRNA / 消化 / ニホンザル
Outline of Final Research Achievements

This study aims to reveal the coevolution process of primates and their gut microbiota. We clarify the changes of gut microbiota in response to the changes in primate diet, both at ecological and evolutionary time scales, and how it affects the digestion of the host primates. In our study in Yakushima, we clarified that the gut microbe species composition changes annually, in response to the seasonal fluctuations of the diet. Bacteria species diversity was highest in the leaf-eating season. We conducted in vitro digestibility assay using fresh feces of Japanese macaques in Yakushima as inoculum and dry leaf powder as substrate. Feces from highland, where macaques eat more leaves than lowland, are shown to have higher ability of fermentation.

Report

(5 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (43 results)

All 2017 2016 2015 2014 2013 Other

All Int'l Joint Research (2 results) Journal Article (22 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 22 results,  Open Access: 6 results,  Acknowledgement Compliant: 1 results) Presentation (16 results) Remarks (3 results)

  • [Int'l Joint Research] Universiti Malaysia Sabah(マレーシア)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] マレーシアサバ大学/野生動物局(マレーシア)

    • Related Report
      2015 Annual Research Report
  • [Journal Article] Factors Affecting Leaf Selection by Foregut-fermenting Proboscis Monkeys: New Insight from in vitro Digestibility and Toughness of Leaves2017

    • Author(s)
      Matsuda I, Clauss M, Tuuga A, Sugau J, Hanya G, Yumoto T, Bernard H, and Hummel J
    • Journal Title

      Sci Rep

      Volume: 7 Issue: 1 Pages: 42774-42774

    • DOI

      10.1038/srep42774

    • NAID

      120005997744

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] 宮田晃江、好廣眞一、高畑由起夫、萬田正治、古市剛史、栗原洋介、早石周平、半谷吾郎2017

    • Author(s)
      宮田晃江、好廣眞一、高畑由起夫、萬田正治、古市剛史、栗原洋介、早石周平、半谷吾郎
    • Journal Title

      霊長類研究

      Volume: 印刷中

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Draft genome sequences of Sarcina ventriculi isolated from wild Japanese macaques in Yakushima island2016

    • Author(s)
      Ushida K, Tsuchida S, Ogura Y, Hayashi T, Sawada A, Hanya G
    • Journal Title

      Genome Announcements

      Volume: 4 Issue: 1 Pages: 1-2

    • DOI

      10.1128/genomea.01694-15

    • Related Report
      2016 Annual Research Report 2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Seasonal and inter-island variation in the foraging strategy of the critically endangered Red-headed Wood Pigeon Columba janthina nitens in disturbed island habitats derived from high-throughput sequencing.2016

    • Author(s)
      Ando H, Suzuki S, Horikoshi K, Suzuki H, Umehara S, Yamasaki M, Hanya G, Inoue-Murayama M, Isagi Y
    • Journal Title

      Ibis

      Volume: 158 Issue: 2 Pages: 291-304

    • DOI

      10.1111/ibi.12345

    • Related Report
      2016 Annual Research Report 2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Seasonally consistent small home range and long ranging distance in Presbytis rubicunda in Danum Valley, Borneo2016

    • Author(s)
      Hanya G, Bernard H
    • Journal Title

      International Journal of Primatology

      Volume: 37 Issue: 3 Pages: 390-404

    • DOI

      10.1007/s10764-016-9907-z

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Frugivore assemblage of Ficus superba in a warm-temperate forest in Yakushima, Japan2016

    • Author(s)
      Hamada A, Hanya G
    • Journal Title

      Ecological Research

      Volume: 31 Issue: 6 Pages: 903-911

    • DOI

      10.1007/s11284-016-1398-z

    • NAID

      40021004163

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Species Richness and Distribution of Primates in Disturbed and Converted Forest Landscapes in Northern Borneo2016

    • Author(s)
      Bernard H, Bili R, Matsuda I, Hanya G, Wearn OR, Wong A, and Ahmad AH
    • Journal Title

      Tropical Conservation Science

      Volume: 9 Issue: 4 Pages: 1-11

    • DOI

      10.1177/1940082916680104

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Different roles of seeds and young leaves in the diet of red leaf monkeys (Presbytis rubicunda): Comparisons of availability, nutritional properties and associated feeding behavior2015

    • Author(s)
      Hanya G & Bernard H
    • Journal Title

      International Journal of Primatology

      Volume: 36 Issue: 1 Pages: 177-193

    • DOI

      10.1007/s10764-015-9819-3

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Comparison of feeding behavior between two different-sized groups of Japanese macaques (Macaca fuscata yakui)2015

    • Author(s)
      Kurihara Y, Hanya G
    • Journal Title

      American Journal of Primatology

      Volume: 77 Issue: 9 Pages: 986-1000

    • DOI

      10.1002/ajp.22429

    • NAID

      120005674637

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] (2014) Dietary modification by common brown lemurs (Eulemur fulvus) during seasonal drought conditions in western Madagascar2014

    • Author(s)
      Sato H, Ichino S & Hanya G
    • Journal Title

      Primates

      Volume: 55 Issue: 2 Pages: 219-230

    • DOI

      10.1007/s10329-013-0392-0

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mycophagy among Japanese macaques in Yakushima: fungal species diversity and behavioral patterns2014

    • Author(s)
      Sawada A, Sato H, Inoue E, Otani Y & Hanya G
    • Journal Title

      Primates

      Volume: 55 Issue: 2 Pages: 249-257

    • DOI

      10.1007/s10329-013-0396-9

    • NAID

      120005613690

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Short-term separation from groups by male Japanese macaques : Costs and benefits in feeding behavior and social interaction2014

    • Author(s)
      Otani, et al
    • Journal Title

      American Journal of Primatology

      Volume: 76 Issue: 4 Pages: 249-257

    • DOI

      10.1002/ajp.22241

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Ecosystem impacts of folivory and frugivory by Japanese macaques in two temperate forests in Yakushima2014

    • Author(s)
      Hanya G, Fuse M, Aiba S, Takafumi H, Tsujino R, Agetsuma N & Chapman C
    • Journal Title

      American Journal of Primatology

      Volume: 76 Issue: 6 Pages: 596-607

    • DOI

      10.1002/ajp.22253

    • NAID

      120005651925

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Coming down from the trees : Is terrestrial activity in Bornean orangutans natural or disturbance driven?2014

    • Author(s)
      Ancrenaz M, R. Sollmann, M. Nakabayasi (15番目), & Andreas Wilting.
    • Journal Title

      Scientific Reports

      Volume: 4 Issue: 1 Pages: 4024-4024

    • DOI

      10.1038/srep04024

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Functional response to fruiting seasonality by a primate seed predator, red leaf monkey (Presbytis rubicunda)2013

    • Author(s)
      Hanya G & Bernard H
    • Journal Title

      Tropical Ecology

      Volume: 54 Pages: 383-395

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Linking feeding ecology and population abundance : a review of food resource limitation on primates2013

    • Author(s)
      Hanya G & Chapman CA
    • Journal Title

      Ecological Research

      Volume: 28 Issue: 2 Pages: 183-190

    • DOI

      10.1007/s11284-012-1012-y

    • NAID

      10031164210

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Fruiting and flushing phenology in Asian tropical and temperate forests : implications for primate ecology2013

    • Author(s)
      Hanya G, Tsuji Y & Grueter CC
    • Journal Title

      Primates

      Volume: 54 Issue: 2 Pages: 101-110

    • DOI

      10.1007/s10329-012-0341-3

    • NAID

      10031165730

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Diet, activity, habitat use and ranging of two neighboring groups of food-enhanced long-tailed macaques (Macaca fascicularis)2013

    • Author(s)
      Sha JCM & Hanya G
    • Journal Title

      American Journal of Primatology

      Volume: 75 Issue: 6 Pages: 581-592

    • DOI

      10.1002/ajp.22137

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Density of Japanese macaque(Macaca fuscata yakui) males ranging alone : seasonal and regional variation in male cohesiveness with the group2013

    • Author(s)
      Otani Y, Yoshihiro S, Takahata Y, Zamma K, Nagai M. Kanie M, Hayaishi S, Fujino M, Sugaya K, Sudo M, Amanai S, Kaneda M, Tachikawa Y, Fukunaga Y, Okahisa Y, Higashi K & Hanya G
    • Journal Title

      Mammal Study

      Volume: 38 Issue: 2 Pages: 105-115

    • DOI

      10.3106/041.038.0206

    • NAID

      10031185575

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Feeding strategies of primates in temperate and alpine forests : a comparison of Asian macaques and colobines2013

    • Author(s)
      Tsuji Y, Hanya G & Grueter CC
    • Journal Title

      Primates

      Volume: 54 Issue: 3 Pages: 201-215

    • DOI

      10.1007/s10329-013-0359-1

    • NAID

      10031185554

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Temporal food resource correlates to the behavior and ecology of food-enhanced long-tailed macaques (Macaca fascicularis)2013

    • Author(s)
      Sha JCM & Hanya G
    • Journal Title

      Mammal Study

      Volume: 38 Issue: 3 Pages: 163-175

    • DOI

      10.3106/041.038.0305

    • NAID

      10031203264

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Leaf selection by two Bornean colobine monkeys in relation to plant chemistry and abundance2013

    • Author(s)
      Matsuda I, Tuuga A, Bernard H, Sugau J & Hanya G
    • Journal Title

      Scientific Reports

      Volume: 3 Issue: 1 Pages: 1873-1873

    • DOI

      10.1038/srep01873

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] 屋久島に生息するニホンザルの高順位個体は採食競合による利益を得ているか2017

    • Author(s)
      栗原洋介、半谷吾郎
    • Organizer
      第64回日本生態学会大会
    • Place of Presentation
      早稲田大学
    • Year and Date
      2017-03-15
    • Related Report
      2016 Annual Research Report
  • [Presentation] 屋久島山頂部におけるヤクシマザルの季節移動2017

    • Author(s)
      本田剛章、半谷吾郎
    • Organizer
      第64回日本生態学会大会
    • Place of Presentation
      早稲田大学
    • Year and Date
      2017-03-15
    • Related Report
      2016 Annual Research Report
  • [Presentation] 屋久島海岸域に生息するニホンザルにおけるエネルギー収支の季節変化2016

    • Author(s)
      栗原洋介、半谷吾郎
    • Organizer
      第32回日本霊長類学会大会
    • Place of Presentation
      鹿児島大学
    • Year and Date
      2016-07-15
    • Related Report
      2016 Annual Research Report
  • [Presentation] ボルネオ島・ダナムバレーのレッドリーフモンキーの遊動パターン2016

    • Author(s)
      半谷吾郎、Henry Bernard
    • Organizer
      第32回日本霊長類学会大会
    • Place of Presentation
      鹿児島大学
    • Year and Date
      2016-07-15
    • Related Report
      2016 Annual Research Report
  • [Presentation] 屋久島に生息するニホンザルにおけるエネルギーバランスの季節変化2016

    • Author(s)
      栗原洋介、半谷吾郎
    • Organizer
      第63回日本生態学会大会
    • Place of Presentation
      仙台国際センター
    • Year and Date
      2016-03-20
    • Related Report
      2015 Annual Research Report
  • [Presentation] 低密度下でのシカと植生の関係: 屋久島のヤクスギ林の場合2016

    • Author(s)
      半谷吾郎
    • Organizer
      第63回日本生態学会大会
    • Place of Presentation
      仙台国際センター
    • Year and Date
      2016-03-20
    • Related Report
      2015 Annual Research Report
  • [Presentation] 屋久島における植生の垂直分布に着目した森林性野ネズミの種構成と生態特性の比較2016

    • Author(s)
      肥後悠馬、本田剛章、半谷吾郎、梶村恒
    • Organizer
      第63回日本生態学会大会
    • Place of Presentation
      仙台国際センター
    • Year and Date
      2016-03-20
    • Related Report
      2015 Annual Research Report
  • [Presentation] 屋久島のニホンザル分布の過去20年間の変化2015

    • Author(s)
      半谷吾郎、宮田晃江、好廣眞一、高畑由起夫、古市剛史、 栗原洋介、 早石周平
    • Organizer
      第31回日本霊長類学会大会
    • Place of Presentation
      京都大学
    • Year and Date
      2015-07-18
    • Related Report
      2015 Annual Research Report
  • [Presentation] ニホンザルは行動圏の周縁で食物パッチ利用を変化させる2015

    • Author(s)
      栗原洋介、半谷吾郎
    • Organizer
      第31回日本霊長類学会大会
    • Place of Presentation
      京都大学
    • Year and Date
      2015-07-18
    • Related Report
      2015 Annual Research Report
  • [Presentation] ニホンザルは行動圏の周縁で採食樹利用を変化させるか2015

    • Author(s)
      栗原洋介、半谷吾郎
    • Organizer
      第62回日本生態学会大会
    • Place of Presentation
      鹿児島大学
    • Year and Date
      2015-03-18 – 2015-03-22
    • Related Report
      2014 Annual Research Report
  • [Presentation] 野生ニホンザルの腸内細菌叢は採食パターンに応じて変化するのか2015

    • Author(s)
      澤田晶子、早川卓志、栗原洋介、半谷吾郎、岸田拓士、阿形清和
    • Organizer
      第62回日本生態学会大会
    • Place of Presentation
      鹿児島大学
    • Year and Date
      2015-03-18 – 2015-03-22
    • Related Report
      2014 Annual Research Report
  • [Presentation] 屋久島の吸血性ヤマビルの宿主選択2015

    • Author(s)
      半谷吾郎,中野隆文
    • Organizer
      第62回日本生態学会大会
    • Place of Presentation
      鹿児島大学
    • Year and Date
      2015-03-18 – 2015-03-22
    • Related Report
      2014 Annual Research Report
  • [Presentation] 屋久島でニホンザルはオオイタビにとって最も重要な消費者か?2015

    • Author(s)
      有賀菜津美,佐藤まどか,横塚彩,戸田和弥,西栄美子,Cecile Sarabian,Liesbeth Frias,Augustin K. Basabose,澤田晶子,半谷吾郎,湯本貴和
    • Organizer
      第62回日本生態学会大会
    • Place of Presentation
      鹿児島大学
    • Year and Date
      2015-03-18 – 2015-03-22
    • Related Report
      2014 Annual Research Report
  • [Presentation] TWO DIFFERENT-SIZED GROUPS OF JAPANESE MACAQUES (MACACA FUSCATA YAKUI)2014

    • Author(s)
      KuriharaY, Hanya G
    • Organizer
      XXV Congress of International Primatological Society
    • Place of Presentation
      Hanoi
    • Year and Date
      2014-08-12 – 2014-08-16
    • Related Report
      2014 Annual Research Report
  • [Presentation] EATING SEED OR YOUNG LEAF?: COMPARISON OF CHEMICAL AND DISTRIBUTIONAL PROPERTIES FOR RED LEAF MONKEYS IN DANUM VALLEY, BORNEO2014

    • Author(s)
      Hanya G, Bernard H
    • Organizer
      XXV Congress of International Primatological Society
    • Place of Presentation
      Hanoi
    • Year and Date
      2014-08-12 – 2014-08-16
    • Related Report
      2014 Annual Research Report
  • [Presentation] 野生ニホンザルの腸内細菌叢解析:サンプル保存方法による影響の比較2014

    • Author(s)
      澤田晶子、福田真嗣、半谷吾郎
    • Organizer
      第61回日本生態学会大会
    • Place of Presentation
      広島国際会議場
    • Related Report
      2013 Annual Research Report
  • [Remarks] 半谷吾郎

    • URL

      http://www.pri.kyoto-u.ac.jp/sections/ecolcons/hanya/

    • Related Report
      2016 Annual Research Report
  • [Remarks] 半谷吾郎

    • URL

      http://www.pri.kyoto-u.ac.jp/shakai-seitai/ecolcons/hanya/

    • Related Report
      2014 Annual Research Report
  • [Remarks] 半谷吾郎

    • URL

      http://www.pri.kyoto-u.ac.jp/shakai-seitai/ecolcons/hanya/

    • Related Report
      2013 Annual Research Report

URL: 

Published: 2013-05-21   Modified: 2019-07-29  

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