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Identification of the candidate genes for Lymphocystis disease resistance in Japanese flounder.

Research Project

Project/Area Number 25292118
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Aquatic bioproduction science
Research InstitutionTokyo University of Marine Science and Technology

Principal Investigator

Sakamoto Takashi  東京海洋大学, その他部局等, 教授 (40313390)

Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥18,460,000 (Direct Cost: ¥14,200,000、Indirect Cost: ¥4,260,000)
Fiscal Year 2015: ¥5,590,000 (Direct Cost: ¥4,300,000、Indirect Cost: ¥1,290,000)
Fiscal Year 2014: ¥8,840,000 (Direct Cost: ¥6,800,000、Indirect Cost: ¥2,040,000)
Fiscal Year 2013: ¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Keywordsウイルス / 耐病性 / 遺伝子 / ゲノム / 育種 / ヒラメ / マーカー選抜 / SNP / マーカー選抜育種 / MAS
Outline of Final Research Achievements

Japanese flounder is an economically important aquaculture speceis in Asian countries such as Japan, Korea and China. Lymphocystis disease (LD) is one of important disease and causes serious damage to Japanese flounder aquaculture industry.
In this study, we investigated the candidate genes for Lymphocystis disease resistance in Japanese flounder using linkage analysis, gene expression analysis and sequence analysis. The genetic locus controlling the resistance to lymphocystis disease was localized on 1.1cM (about 134kb) by linkage analysis. Eleven cDNA of candidate genes from the locus controlling the resistance to lymphocystis disease were isolated and used for gene expression analysis and sequence analysis.
Two candidate genes for lymphocystis disease resistance were identified by gene expression analysis and sequence analysis. The genetic frequency of SNP on the candidate genes was about 2% in wild population.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (6 results)

All 2016 2015 2014 Other

All Int'l Joint Research (1 results) Journal Article (1 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 1 results,  Open Access: 1 results,  Acknowledgement Compliant: 1 results) Presentation (4 results) (of which Int'l Joint Research: 1 results,  Invited: 1 results)

  • [Int'l Joint Research] Yellow Sea Fisheries Research Institute(China)

    • Related Report
      2015 Annual Research Report
  • [Journal Article] Genome-Wide SNP Identification for the Construction of a High-Resolution Genetic Map of Japanese Flounder (Paralichthys olivaceous): applications to QTL Mapping of Vibrio anguillarum Disease Resistance and Comparative Genomic Analysis.2015

    • Author(s)
      C. Shao, Y. Niu, P. Rastas, Y. Liu, Z. Xie, H. Li, L. Wang, Y. Jiang, S. Tai, Y. Tian, T. Sakamoto and S. Chen.
    • Journal Title

      DNA Research

      Volume: 22 (2) Issue: 2 Pages: 161-170

    • DOI

      10.1093/dnares/dsv001

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Presentation] 養殖魚類における遺伝情報を活用したゲノム育種研究の現状と展望2016

    • Author(s)
      坂本崇
    • Organizer
      魚類防疫士連絡協議会 講演会
    • Place of Presentation
      東京都中央区
    • Year and Date
      2016-03-11
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] ヒラメのリンホシスチス病抵抗性候補領域内に存在する遺伝子の単離と配列解析2015

    • Author(s)
      中嶋彩奈・法橋亜矢子・佐野元彦・坂本崇
    • Organizer
      日本水産学会
    • Place of Presentation
      宮城県仙台市(東北大学)
    • Year and Date
      2015-09-23
    • Related Report
      2015 Annual Research Report
  • [Presentation] CONVENIENT PHYSICAL GENOME MAP OF FLOUNDER. A PRACTICAL WHOLE- GENOME RADIATION HYBRID MAP OF JAPANESE FLOUNDER.2015

    • Author(s)
      Okamoto H., Aoki J., Nozaki T., Ozaki A., Uji S., Fuji K., Sakamoto T., Okamoto N., Kawai J., Araki K., Ekker M.
    • Organizer
      THE INTERNATIONAL SYMPOSIUM ON GENETICS IN AQUACULTURE XII
    • Place of Presentation
      SANTIAGO DE COMPOSTELA, SPAIN
    • Year and Date
      2015-06-22
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] ヒラメリンホシスチス病抵抗性遺伝子座領域に存在する候補遺伝子の発現解析2014

    • Author(s)
      法橋亜矢子、杉森信哉、長谷川理、Changwei Shao、 Songlin Chen、佐野元彦、坂本崇
    • Organizer
      日本動物遺伝育種学会第15回大会
    • Place of Presentation
      埼玉県和光市(理化学研究所)
    • Year and Date
      2014-10-31 – 2014-11-01
    • Related Report
      2014 Annual Research Report

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Published: 2013-05-21   Modified: 2019-07-29  

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