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Construction of 3D pathological images and registration to MR image for multimodal analysis of brain tumor

Research Project

Project/Area Number 25560189
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Biomedical engineering/Biomaterial science and engineering
Research InstitutionChiba University

Principal Investigator

Haneishi Hideaki  千葉大学, フロンティア医工学センター, 教授 (20228521)

Co-Investigator(Renkei-kenkyūsha) NAKAGUCHI Toshiya  千葉大学, フロンティア医工学センター, 准教授 (20361412)
Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2015: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2014: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2013: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywordsマルチモダリティ / マルチスケール / 病理画像 / MR像 / 画像レジストレーション / テクスチャ解析 / 光学像 / レジストレーション / MRI / 脳腫瘍 / 画像解析 / MR画像 / 画像融合 / マルチモーダル / マクロ画像 / 剛体変換 / 非剛体変換
Outline of Final Research Achievements

Recently, expectations for multi scale analysis in medical imaging are growing. Prior to such analysis, high quality alignment between images are needed. We propose registration methods. Conventional metrics such as mutual information cannot evaluate similarity between images appropriately when image resolutions are extremely different. In this study, a texture analysis technique was introduced to image registration. Image acquisition experiment using a pig brain was conducted. We confirmed that difference between gray and white matters in pathological image was clearly enhanced and image registration between pathological images and MR image was successfully conducted. We also propose a registration method that mediates optical image of tissue surface. Tissue optical image and pathological image is taken from pig’s brain and alignment between optical image and pathological image by affine transformation is carry out.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (17 results)

All 2016 2015 2014 2013 Other

All Int'l Joint Research (1 results) Journal Article (3 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 1 results,  Open Access: 2 results) Presentation (12 results) (of which Int'l Joint Research: 1 results) Book (1 results)

  • [Int'l Joint Research] ハーバード大学(マサチューセッツ総合病院)(米国)

    • Related Report
      2015 Annual Research Report
  • [Journal Article] Development of a 2D Image Reconstruction and Viewing System for Histological Images from Multiple Tissue Blocks: Towards High-Resolution Whole-Organ 3D Histological Images2016

    • Author(s)
      Noriaki Hashimoto, Pinky A. Bautista, Hideaki Haneishi, Matija Snuderl, Yukako Yagi
    • Journal Title

      Pathobiology

      Volume: 83 Issue: 2-3 Pages: 127-139

    • DOI

      10.1159/000443278

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Registration Between Pathological Image and MR Image for Comparing Different Modality Images of Brain Tumor2014

    • Author(s)
      Y.Nakamura, T.Tanaka, T.Ohnishi, N.Hashimoto, H.Haneishi, J.Taylor, M.Snuderl, Y.Yagi
    • Journal Title

      Analytical Cellular Pathology

      Volume: 2014 Pages: 1-3

    • DOI

      10.1155/2014/430762

    • Related Report
      2014 Research-status Report
    • Open Access
  • [Journal Article] Connection and Deformation of Pathological Images via a Macro Image for Comparing Different Modality Images of Brain Tumor2014

    • Author(s)
      T.Ohnishi, T.Tanaka, Y.Nakamura, N.Hashimoto, H.Haneishi, J.Taylor, M.Snuderl, Y.Yagi
    • Journal Title

      Analytical Cellular Pathology

      Volume: 2014 Pages: 1-3

    • DOI

      10.1155/2014/368951

    • Related Report
      2014 Research-status Report
    • Open Access
  • [Presentation] 光学撮影機構の高機能化による病理画像と組織光学像の位置合わせ法の高精度化に向けた検討2016

    • Author(s)
      大西峻,中村友香,田中拓也,羽石秀昭
    • Organizer
      メディカルイメージング連合フォーラム2016
    • Place of Presentation
      那覇市ぶんかテンブス館(沖縄県那覇市)
    • Year and Date
      2016-01-19
    • Related Report
      2015 Annual Research Report
  • [Presentation] テクスチャ解析を用いた病理画像とMR画像の位置合わせ2016

    • Author(s)
      大西峻,田中拓也,中村友香,新田展大,青木伊知男,羽石秀昭
    • Organizer
      メディカルイメージング連合フォーラム2016
    • Place of Presentation
      那覇市ぶんかテンブス館(沖縄県那覇市)
    • Year and Date
      2016-01-19
    • Related Report
      2015 Annual Research Report
  • [Presentation] Image registration between pathological images and an optical image for comparing different modality images2015

    • Author(s)
      Takuya Tanaka, Yuka Nakamura, Takashi Ohnishi, Hideaki Haneishi
    • Organizer
      International Symposium on InfoComm and Media Technology in Bio-Medical and Healthcare Application (2015 IS-3T-in-3A)
    • Place of Presentation
      Chiba, Japan
    • Year and Date
      2015-11-15
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 大型標本のマルチモーダル疾患解析のための光学画像群と3次元MR画像の位置合わせ法2015

    • Author(s)
      中村友香, 大西峻, 田中拓也, 新田展大, 青木伊知男, 八木由香子, 羽石秀昭
    • Organizer
      第34回 日本医用画像工学会大会
    • Place of Presentation
      金沢歌劇座(石川県金沢市)
    • Year and Date
      2015-07-30
    • Related Report
      2015 Annual Research Report
  • [Presentation] マクロ画像参照による脳の2次元病理画像群の変形と補正2015

    • Author(s)
      田中拓也,大西峻,中村友香,橋本典明,羽石秀昭
    • Organizer
      メディカルイメージング連合フォーラム2015
    • Place of Presentation
      石垣島ホテルミヤヒラ
    • Year and Date
      2015-03-02 – 2015-03-03
    • Related Report
      2014 Research-status Report
  • [Presentation] Registration Between Pathological Image and MR Image for Comparing Different Modality Images of Brain Tumor2014

    • Author(s)
      Y.Nakamura, T.Tanaka, T.Ohnishi, N.Hashimoto, H.Haneishi, J.Taylor, M.Snuderl, Y.Yagi
    • Organizer
      2nd Congress of International Academy of Digital Pathology(IADP)
    • Place of Presentation
      Boston, USA
    • Year and Date
      2014-11-03 – 2014-11-04
    • Related Report
      2014 Research-status Report
  • [Presentation] Connection and Deformation of Pathological Images via a Macro Image for Comparing Different Modality Images of Brain Tumor2014

    • Author(s)
      T.Ohnishi, T.Tanaka, Y.Nakamura, N.Hashimoto, H.Haneishi, J.Taylor, M.Snuderl, Y.Yagi
    • Organizer
      2nd Congress of International Academy of Digital Pathology(IADP)
    • Place of Presentation
      Boston, USA
    • Year and Date
      2014-11-03 – 2014-11-04
    • Related Report
      2014 Research-status Report
  • [Presentation] 脳腫瘍のマルチモダリティー間比較のための光学像とMR画像の位置合わせ法2014

    • Author(s)
      中村友香,田中亨,大西峻,羽石秀昭,橋本典明,Jennie Taylor,Matija Snuderl,八木由香子
    • Organizer
      第33回 日本医用画像工学会大会
    • Place of Presentation
      東京慈恵会医科大学
    • Year and Date
      2014-07-24 – 2014-07-26
    • Related Report
      2014 Research-status Report
  • [Presentation] マクロ画像参照による脳腫瘍2次元病理画像群の変形補正と合成2014

    • Author(s)
      田中亨,大西峻,八木由香子,橋本典明,Jennie TAYLOR,Matija SNUDERL,羽石秀昭
    • Organizer
      メディカルイメージング連合フォーラム2014
    • Place of Presentation
      那覇市ぶんかテンブス館
    • Related Report
      2013 Research-status Report
  • [Presentation] 脳腫瘍解析のための光学像とMR画像の位置合わせ法2014

    • Author(s)
      中村友香,田中亨,大西峻,八木由香子,橋本典明,Jennie Taylor,Matija Snuderl,羽石秀昭
    • Organizer
      情報フォトニクス研究会
    • Place of Presentation
      電気通信大学
    • Related Report
      2013 Research-status Report
  • [Presentation] 脳腫瘍のマルチモーダル画像解析のための光学像とMR像の非剛体レジストレーション2014

    • Author(s)
      中村友香,田中亨,大西峻,八木由香子,橋本典明,Jennie Taylor,Matija Snuderl,羽石秀昭
    • Organizer
      日本医工学治療学会第30回学術大会
    • Place of Presentation
      ウインクあいち
    • Related Report
      2013 Research-status Report
  • [Presentation] 脳腫瘍のマルチモーダル画像解析のための3次元病理画像構築およびMR画像との融合2013

    • Author(s)
      田中亨,八木由香子,橋本典明,Jennie TAYLOR,Matija SNUDERL,羽石秀昭
    • Organizer
      第32回 日本医用画像工学会大会
    • Place of Presentation
      日本科学未来館/産業技術総合研究所臨海副都心センター
    • Related Report
      2013 Research-status Report
  • [Book] 医学物理学教科書 村山秀雄編著「核医学物理学」第8章第3節 融合画像処理2015

    • Author(s)
      羽石秀昭
    • Total Pages
      8
    • Publisher
      国際文献社
    • Related Report
      2014 Research-status Report

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Published: 2014-07-25   Modified: 2022-01-27  

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