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Artificial protease discovery via the 10BASEd-T

Research Project

Project/Area Number 25620127
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Bio-related chemistry
Research InstitutionThe University of Electro-Communications

Principal Investigator

TAKI Masumi  電気通信大学, 情報理工学(系)研究科, 准教授 (70362952)

Project Period (FY) 2013-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2014: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Fiscal Year 2013: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywords10BASEd-T / T7ファージ / ファージディスプレイ / 人工分子コア / 分子進化 / ファーマコフォア / ライブラリー / 触媒 / サリチル酸 / 人工分子進化
Outline of Final Research Achievements

We have demonstrated generation of a novel pharmacophore from artificial drug-like core structure (i.e. salicylic acid) by optimization of the surrounding peptide sequence. The point is that the drug-like core structure is never known to bind to a target protein. That is entirely different from improvement of a known drug structure by similar in vitro selection. We hope that computer assisted de novo designing, data mining from broad public databases, and/or docking simulation of the small drug-like core molecule followed by optimization of its surroundings by peptide via the 10BASEd-T would be a general technology for drug discovery. This has been published in an open-access journal of Molecules, 19, 2481-2496 (2014).

Report

(3 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • Research Products

    (15 results)

All 2014 2013 Other

All Journal Article (4 results) (of which Peer Reviewed: 4 results) Presentation (9 results) (of which Invited: 3 results) Remarks (2 results)

  • [Journal Article] Pharmacophore Generation from a Drug-like Core Molecule Surrounded by a Library Peptide via the 10BASEd-T on Bacteriophage T72014

    • Author(s)
      Yuuki Tokunaga, Yuuki Azetsu, Keisuke Fukunaga, Takaaki Hatanaka, Yuji Ito and Masumi Taki
    • Journal Title

      Molecules

      Volume: 19 Issue: 2 Pages: 2481-2496

    • DOI

      10.3390/molecules19022481

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Selection of Streptavidin-Binding Artificial Peptide Possessing Salicylic Acid Moiety via the 10BASEd-T on the Bacteriophage T72014

    • Author(s)
      Yuuki Tokunaga, Keisuke Fukunaga, Takaaki Hatanaka, Yuji Ito and Masumi Taki*
    • Journal Title

      Peptide Science

      Volume: 2013 Pages: 173-174

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] An Artificial Molecule-Peptide Hybrid Discovered via the 10BASEd-T Binds to the Substrate-Binding Site of Glutathione S-Transferase2014

    • Author(s)
      Keisuke Fukunaga*, Takaaki Hatanaka, Yuji Ito and Masumi Taki*
    • Journal Title

      Peptide Science

      Volume: 2013 Pages: 91-92

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Gp10 based-thioetherification (10BASEd-T) on a displaying library peptide of bacteriophage T72013

    • Author(s)
      Keisuke Fukunaga, Takaaki Hatanaka, Yuji Ito and Masumi Taki
    • Journal Title

      Mol. Biosyst.

      Volume: 9 Issue: 12 Pages: 2988-2991

    • DOI

      10.1039/c3mb70379g

    • Related Report
      2014 Annual Research Report 2013 Research-status Report
    • Peer Reviewed
  • [Presentation] Artifical macrocycle as functional-equivalent of catalytic protein2014

    • Author(s)
      Hiroaki Inoue, Rika Asano, Masumi Taki
    • Organizer
      第51回ペプチド討論会
    • Place of Presentation
      徳島大
    • Year and Date
      2014-10-21 – 2014-10-24
    • Related Report
      2014 Annual Research Report
  • [Presentation] 10BASEd-T法を用いた人工分子の進化2014

    • Author(s)
      福永 圭祐・伊東 祐二・南 道子・○瀧 真清
    • Organizer
      第8回バイオ関連化学シンポジウム
    • Place of Presentation
      岡山大
    • Year and Date
      2014-09-13
    • Related Report
      2014 Annual Research Report
  • [Presentation] Drug discovery systems engineering2014

    • Author(s)
      Masumi Taki
    • Organizer
      BIT's 7th annual congress of industrial biotechnology
    • Place of Presentation
      Dalien
    • Year and Date
      2014-04-27
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Cancer detection and cure2014

    • Author(s)
      Masumi Taki
    • Organizer
      The 2nd conference on interdisciplinaryresearch in traditional medicine and modern medical bioscience
    • Place of Presentation
      Nanjing medical university
    • Year and Date
      2014-04-24
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 創薬システムエンジニアリング:NEXT-A法および10BASEd-T法の開発2013

    • Author(s)
      瀧 真清*
    • Organizer
      群馬大学 H25年度夏期複合材料研究会
    • Place of Presentation
      草津市
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] Gp10 based-thioetherification (10BASEd-T) on a displaying peptide of the bacteriophage T72013

    • Author(s)
      Keisuke Fukunaga* and Masumi Taki
    • Organizer
      10th Australian International Peptide Conference
    • Place of Presentation
      Malaysia
    • Related Report
      2013 Research-status Report
  • [Presentation] T7ファージ上での人工ペプチドライブラリーの作製2013

    • Author(s)
      福永 圭祐*、瀧 真清
    • Organizer
      第7回バイオ関連化学シンポジウム(日本化学会)
    • Place of Presentation
      名古屋市
    • Related Report
      2013 Research-status Report
  • [Presentation] Optimization of a Pharmacophore by Peptide Conjugation via the 10BASEd-T on the Bacteriophage T72013

    • Author(s)
      Yuuki Tokunaga*, Keisuke Fukunaga, Takaaki Hatanaka, Yuji Ito and Masumi Taki
    • Organizer
      4th Asia-Pacific International Peptide Symposium (APIPS 2013)
    • Place of Presentation
      Osaka
    • Related Report
      2013 Research-status Report
  • [Presentation] Chemical Evolution of Bacteriophage T7-displayed Peptides2013

    • Author(s)
      Keisuke Fukunaga*, Takaaki Hatanaka, Yuji Ito, Michiko Minami and Masumi Taki
    • Organizer
      4th Asia-Pacific International Peptide Symposium (APIPS 2013)
    • Place of Presentation
      Osaka
    • Related Report
      2013 Research-status Report
  • [Remarks] 電気通信大学 瀧研究室

    • URL

      http://tkl.pc.uec.ac.jp/index.html

    • Related Report
      2014 Annual Research Report
  • [Remarks] 電気通信大学 瀧研究室

    • URL

      http://tkl.pc.uec.ac.jp/index.html

    • Related Report
      2013 Research-status Report

URL: 

Published: 2014-07-25   Modified: 2019-07-29  

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