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Elucidation of the distribution change of Japanese cedar (Cryptomeria japonica) since the last glacial period based on the polymorphism of fossil pollen DNA

Research Project

Project/Area Number 25850113
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Forest science
Research InstitutionAkita Prefectural University

Principal Investigator

HASEGAWA Yoichi  秋田県立大学, 付置研究所, 研究員 (30634034)

Project Period (FY) 2013-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Fiscal Year 2014: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2013: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Keywordsスギ / 花粉化石 / 葉緑体DNA / マイクロサテライトマーカー
Outline of Final Research Achievements

In this study, I tried to collect the fossil pollen grains of Cryptomeria japonica from the sediments of the marsh of the Tohoku region, and tried to amplify ancient DNA and compare the aDNA with DNA of present C. japonica populations. The genetic diversity of 17 chloroplast microsatellite markers was high enough to use for DNA analysis of fossil pollen grains. Furthermore, in two-isolated C. japonica populations adjacent to the marshes of Mt. Hakkoda, I identified the many trunks reproduced from a same individual by layering using the chloroplast microsatellite markers. However, DNA amplification was not observed from the sediments collected from the marsh. It was considered necessary to improve the method for DNA extraction from sediments.

Report

(3 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • Research Products

    (12 results)

All 2015 2014 2013

All Journal Article (4 results) (of which Peer Reviewed: 4 results,  Open Access: 3 results,  Acknowledgement Compliant: 1 results) Presentation (8 results)

  • [Journal Article] Isolation and characterization of 22 EST-SSR markers for the genus Thujopsis (Cupressaceae)2015

    • Author(s)
      Sato, M., Hasegawa, Y., Mishima, K., Takata, K.
    • Journal Title

      Applications in Plant Sciences

      Volume: 3 Issue: 2 Pages: 1400101-1400101

    • DOI

      10.3732/apps.1400101

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Variation in pollen-donor composition among pollinators in an entomophilous tree species, Castanea crenata, revealed by single-pollen genotyping.2015

    • Author(s)
      Hasegawa Y, Suyama Y, Seiwa K.
    • Journal Title

      PLoS ONE

      Volume: 10 Issue: 3 Pages: e0120393-e0120393

    • DOI

      10.1371/journal.pone.0120393

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Draft sequences of the radish (Raphanus sativus L.) genome.2014

    • Author(s)
      Kitashiba H, Li F, Hirakawa H, Kawanabe T, Zou Z, Hasegawa Y, Tonosaki K, Shirasawa S, Fukushima A, Yokoi S, Takahata Y, Kakizaki T, Ishida M, Okamoto S, Sakamoto K, Shirasawa K, Tabata S, Nishio T.
    • Journal Title

      DNA Research

      Volume: 21 Issue: 5 Pages: 481-490

    • DOI

      10.1093/dnares/dsu014

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 仙台市富沢遺跡のモミ属花粉化石からのDNA増幅と種同定に関する試み2013

    • Author(s)
      長谷川陽一、鈴木三男
    • Journal Title

      植生史研究

      Volume: 22 Pages: 3-12

    • NAID

      130007999556

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Presentation] リンゴ花粉一粒からのPCR法による遺伝子解析.2015

    • Author(s)
      中村桃子, 長谷川陽一, 佐藤奈美子, 髙橋秀和, 渡辺明夫, 赤木宏守, 岡田和馬, 櫻井健二.
    • Organizer
      園芸学会
    • Place of Presentation
      千葉大学
    • Year and Date
      2015-03-28 – 2015-03-29
    • Related Report
      2014 Annual Research Report
  • [Presentation] アスナロ属(ヒバ、アスナロ)天然林を対象としたEST-SSRマーカーによる遺伝構造解析.2015

    • Author(s)
      佐藤都子, 長谷川陽一, 三嶋賢太郎, 高田克彦.
    • Organizer
      日本森林学会
    • Place of Presentation
      北海道大学
    • Year and Date
      2015-03-27 – 2015-03-28
    • Related Report
      2014 Annual Research Report
  • [Presentation] 世代シーケンサーを用いたハチミツに含まれる花粉の種の同定.2015

    • Author(s)
      長谷川陽一, 浅野亮樹, 高田克彦.
    • Organizer
      日本森林学会
    • Place of Presentation
      北海道大学
    • Year and Date
      2015-03-27 – 2015-03-28
    • Related Report
      2014 Annual Research Report
  • [Presentation] 米の主要なトリアシルグリセロールリパーゼの同定と酵素化学的特性の解明.2015

    • Author(s)
      永田俊文, 長谷川陽一, 濱田茂樹, 熊丸敏博, 松坂弘明, 鈴木保宏.
    • Organizer
      日本育種学会
    • Place of Presentation
      玉川大学
    • Year and Date
      2015-03-21 – 2015-03-22
    • Related Report
      2014 Annual Research Report
  • [Presentation] 米の主要なトリアシルグリセロールリパーゼ候補遺伝子の推定とTILLING法による変異系統候補の選抜.2014

    • Author(s)
      長谷川陽一, 濱田茂樹, 熊丸敏博, 松坂弘明, 鈴木保宏.
    • Organizer
      日本育種学会
    • Place of Presentation
      南九州大学
    • Year and Date
      2014-09-26 – 2014-09-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] スギ花粉化石のDNA解析のための、秋田スギ天然林のcpSSR多型分析2014

    • Author(s)
      長谷川陽一、吉田明弘、三嶋賢太郎、高田克彦
    • Organizer
      日本森林学会
    • Place of Presentation
      大宮ソニックシティ
    • Related Report
      2013 Research-status Report
  • [Presentation] EST-SSRマーカーを用いたヒノキアスナロ(ヒバ)天然林の遺伝的多様性解析2014

    • Author(s)
      佐藤都子、長谷川陽一、三嶋賢太郎、蒔田明史、高田克彦
    • Organizer
      日本森林学会
    • Place of Presentation
      大宮ソニックシティ
    • Related Report
      2013 Research-status Report
  • [Presentation] スギ雪害抵抗性品種「出羽の雪」の成長と材質II2014

    • Author(s)
      小林 慧、高田克彦、長谷川陽一、織部雄一朗、古本良
    • Organizer
      日本木材学会
    • Place of Presentation
      愛媛大学
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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