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Evaluation of rice domestication by loss of seed shattering

Research Project

Project/Area Number 26450003
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Science in genetics and breeding
Research InstitutionKobe University

Principal Investigator

Ishikawa Ryo  神戸大学, 農学研究科, 助教 (70467687)

Co-Investigator(Renkei-kenkyūsha) IKEDA KEN-ICHI  神戸大学, 大学院・農学研究科, 准教授 (40437504)
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2016: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2015: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2014: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords栽培イネ / 野生イネ / 脱粒性 / 栽培化 / イネ
Outline of Final Research Achievements

Loss of seed shattering was one of the key phenotypic changes selected for in the domestication of many crop species. Asian cultivated rice, Oryza sativa L., was domesticated from its wild ancestor, O. rufipogon, and three seed-shattering loci, qSH1, sh4 and qSH3, have been reported to be involved in the loss of seed shattering in cultivated rice. In this study, we analysed the seed-shattering behaviour of wild rice using introgression lines carrying the cultivated alleles from O. sativa Nipponbare in the genetic background of wild rice, O. rufipogon W630. We found that the interaction of mutations at these two loci may have played a role in the initial loss of seed shattering during rice domestication.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (15 results)

All 2017 2016 2015 2014 Other

All Int'l Joint Research (2 results) Journal Article (3 results) (of which Peer Reviewed: 3 results,  Acknowledgement Compliant: 3 results,  Open Access: 2 results) Presentation (9 results) (of which Int'l Joint Research: 2 results,  Invited: 1 results) Remarks (1 results)

  • [Int'l Joint Research] University College London(英国)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] University College London(英国)

    • Related Report
      2015 Research-status Report
  • [Journal Article] Estimation of loci involved in non-shattering of seeds in early rice domestication2017

    • Author(s)
      Ryo Ishikawa, Akinori Nishimura, Than Myint Htun, Ryo Nishioka, Yumi Oka, Yuki Tsujimura, Chizuru Inoue, Takashige Ishii
    • Journal Title

      Genetica

      Volume: 145 Issue: 2 Pages: 201-207

    • DOI

      10.1007/s10709-017-9958-x

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Inhibition of abscission layer formation by an interaction of two seed-shattering loci, <i>sh4</i> and <i>qSH3</i>, in rice2015

    • Author(s)
      Chizuru Inoue, Than Myint Htun, Kanako Inoue, Ken-ichi Ikeda, Takashige Ishii, Ryo Ishikawa
    • Journal Title

      Genes & Genetic Systems

      Volume: 90 Issue: 1 Pages: 1-9

    • DOI

      10.1266/ggs.90.1

    • NAID

      130005083380

    • ISSN
      1341-7568, 1880-5779
    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Effect of quantitative trait loci for seed shattering on abscission layer formation in Asian wild rice <i>Oryza rufipogon</i>2014

    • Author(s)
      Than Myint Htun, Chizuru Inoue, Orn Chhourn, Takashige Ishii and Ryo Ishikawa
    • Journal Title

      Breeding Science

      Volume: 64 Issue: 3 Pages: 199-205

    • DOI

      10.1270/jsbbs.64.199

    • NAID

      130004690761

    • ISSN
      1344-7610, 1347-3735
    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] インディカ型栽培イネIR36の非脱粒性を支配する新規遺伝子座の探索2017

    • Author(s)
      辻村雄紀、井上千鶴、Than Myint Htun、西村彬則、杉山昇平、岡佑美、石井尊生、石川亮
    • Organizer
      日本育種学会第131回講演会
    • Place of Presentation
      名古屋大学
    • Year and Date
      2017-03-29
    • Related Report
      2016 Annual Research Report
  • [Presentation] ジャポニカ型栽培イネ(日本晴)の非脱粒性に関与した遺伝子座の推定2016

    • Author(s)
      辻村雄紀、Than Myint Htun、沼口孝司、石井尊生、石川亮
    • Organizer
      日本育種学会第130回講演会
    • Place of Presentation
      鳥取大学
    • Year and Date
      2016-09-24
    • Related Report
      2016 Annual Research Report
  • [Presentation] Identification of quantitative trait loci controlling seed-shattering behaviour in rice2016

    • Author(s)
      Yuki Tsujimura, Than Myint Htun, Chizuru Inoue, Takashige Ishii, Ryo Ishikawa
    • Organizer
      PAG Asia 2016
    • Place of Presentation
      Grand Copthorne Waterfront Hotel, Singapore
    • Year and Date
      2016-06-06
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] インディカ型栽培イネKasalathの脱粒性喪失に関与した新規遺伝子座の探索2016

    • Author(s)
      岡 佑美、井上 千鶴、Than Myint Htun、竹中 祥尭、辻村 雄紀、石井 尊生、石川 亮
    • Organizer
      日本育種学会第129回講演会
    • Place of Presentation
      横浜市立大学
    • Year and Date
      2016-03-21
    • Related Report
      2015 Research-status Report
  • [Presentation] Evaluation of the domestication-related traits in rice2015

    • Author(s)
      Ryo Ishikawa, Yumi Oka, Ryo Nishioka, Mai Ikemoto, Than Myint Htun, Chizuru Inoue, Koji, Numaguchi, and Takashige Ishii
    • Organizer
      Early rice cultivation systems and their impact on social evolution and the environment
    • Place of Presentation
      University collage London、ロンドン、英国
    • Year and Date
      2015-09-15
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] 野生イネ(Oryza rufipogon) の遺伝的背景における種子脱粒性と穂の開帳性の関係2015

    • Author(s)
      井上 千鶴、Than Myint Htun、石井 尊生、石川 亮
    • Organizer
      日本育種学会第128回講演会
    • Place of Presentation
      新潟大学
    • Year and Date
      2015-09-11
    • Related Report
      2015 Research-status Report
  • [Presentation] インディカ型栽培イネ(Oryza sativa cv. IR36)における種子脱粒性の喪失に関与した遺伝子座数の推定2015

    • Author(s)
      西村 彬則、Than Myint Htun、井上 千鶴、岡 佑美、石井 尊生、石川 亮
    • Organizer
      日本育種学会 第127回講演会
    • Place of Presentation
      玉川大学
    • Year and Date
      2015-03-21 – 2015-03-22
    • Related Report
      2014 Research-status Report
  • [Presentation] 野生イネ(Oryza rufipogon)の遺伝的背景における種子脱粒性遺伝子座の相互作用と離層形態2014

    • Author(s)
      井上 千鶴、Than Myint Htun、井上 加奈子、池田 健一、石井 尊生、石川 亮
    • Organizer
      日本育種学会 第126回講演会
    • Place of Presentation
      南九州大学
    • Year and Date
      2014-09-26 – 2014-09-27
    • Related Report
      2014 Research-status Report
  • [Presentation] 野生イネ(Oryza rufipogon)における種子脱粒性遺伝子座間の相互作用2014

    • Author(s)
      井上 千鶴、Than Myint Htun、Orn Chhourn、岡 佑美、石井 尊生、石川 亮
    • Organizer
      イネ遺伝学・分子生物学ワークショップ
    • Place of Presentation
      東京大学
    • Year and Date
      2014-07-11 – 2014-07-12
    • Related Report
      2014 Research-status Report
  • [Remarks] http://www.lab.kobe-u.ac.jp/ans-pb/index.html

    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2022-02-16  

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