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Regulation of Pyruvate Dehydrogenase Kinase

Research Project

Project/Area Number 26450126
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Applied biochemistry
Research InstitutionKyushu University

Principal Investigator

HIROMASA Yasuaki  九州大学, 農学研究院, 准教授 (40291934)

Project Period (FY) 2014-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2016: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2015: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2014: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywordsアロステリック効果 / ダイナミクス / 蛍光異方性 / 分子間相互作用 / キナーゼ / タンパク質の動的構造変化 / 機能制御 / 時間分割蛍光法 / 時間分割蛍光
Outline of Final Research Achievements

The human pyruvate dehydrogenase kinase (PDHK) specifically regulates the reaction of pyruvate dehydrogenase complex (PDC). The function of PDHK is allosterically inhibited by ADP and pyruvate. In this study, to understand the regulation of PDHK, the dynamical structural changes of the C-terminal cross arm structure by binding ligands and chemical modification was analyzed using fluorescence of Trp383 in PDHK2. The binding of ADP and pyruvate induced substantial dynamical changes of C-terminal cross arm structure of PDHK2 as well as PDHK1. Chemical modification of Cys384 by NEM introduced similar effects on the cross arm structure. Analytical ultracentrifuge analysis using NEM-PDHK2 suggests that the dislocation of cross arm structure led to dissociate PDHK2 from inner lioyl domain of E2, which could cause the significant loss of the accessibility to substrate E1.

Report

(5 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (10 results)

All 2018 2016 2015 2014

All Journal Article (5 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 5 results,  Open Access: 3 results) Presentation (5 results) (of which Invited: 3 results)

  • [Journal Article] Atomic Structure of the E2 Inner Core of Human Pyruvate Dehydrogenase Complex2018

    • Author(s)
      Jiang Jiansen、Baiesc Flavius L.、Hiromasa Yasuaki、Yu Xuekui、Hui Wong Hoi、Dai Xinghong、Roche Thomas E.、Zhou Z. Hong
    • Journal Title

      Biochemistry

      Volume: 印刷中 Issue: 16 Pages: 2325-2334

    • DOI

      10.1021/acs.biochem.8b00357

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Characterization and regulation of expression of an antifungal peptide from hemolymph of an insect, Manduca sexta.2016

    • Author(s)
      Al Souhail Q, Hiromasa Y, Rahnamaeian M, Giraldo MC, Takahashi D, Valent B, Vilcinskas A, Kanost MR.
    • Journal Title

      Dev Comp Immunol.

      Volume: 61 Pages: 258-268

    • DOI

      10.1016/j.dci.2016.03.006

    • Related Report
      2016 Research-status Report 2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Physiological Properties and Genome Structure of the Hyperthermophilic Filamentous Phage φOH3 Which Infects Thermus thermophilus HB8.2016

    • Author(s)
      Nagayoshi Y, Kumagae K, Mori K, Tashiro K, Nakamura A, Fujino Y, Hiromasa Y, Iwamoto T, Kuhara S, Ohshima T, Doi K.
    • Journal Title

      Front Microbiol.

      Volume: - Pages: 1-11

    • DOI

      10.3389/fmicb.2016.00050

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Armet is an effector protein mediating aphid-plant interactions.2015

    • Author(s)
      Wang W, Dai H, Zhang Y, Chandrasekar R, Luo L, Hiromasa Y, Sheng C, Peng G, Chen S, Tomich JM, Reese J, Edwards O, Kang L, Reeck G, Cui F.
    • Journal Title

      FASEB J.

      Volume: 29 Issue: 5 Pages: 2032-2045

    • DOI

      10.1096/fj.14-266023

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Self-association of an insect β-1,3-glucan recognition protein upon binding laminarin stimulates prophenoloxidase activation as an innate immune response.2014

    • Author(s)
      Takahashi D, Dai H, Hiromasa Y, Krishnamoorthi R, Kanost MR.
    • Journal Title

      J Biol Chem.

      Volume: 289 Pages: 28399-410

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Presentation] Dynamical structural changes of pyruvate dehydrogenase kinase 2 by modification of cysteine2016

    • Author(s)
      海谷京香, 藤野泰寛, 土居克実, 西本悦子, 廣政恭明
    • Organizer
      日本生物物理学会
    • Place of Presentation
      つくば国際会議場
    • Year and Date
      2016-11-25
    • Related Report
      2016 Research-status Report
  • [Presentation] システイン残基修飾によるピルビン酸デヒドロゲナーゼキナーゼ2の制御2016

    • Author(s)
      海谷京香,藤野泰寛,土居克実,西本悦子,廣政恭明
    • Organizer
      日本農芸化学会西日本支部大会
    • Place of Presentation
      長崎大学
    • Year and Date
      2016-09-15
    • Related Report
      2016 Research-status Report
  • [Presentation] リガンドによるピルビン酸デヒドロゲナーゼキナーゼ2の動的構造変化2016

    • Author(s)
      海谷 京香、藤野 泰寛、土居 克実、西本 悦子、廣政 恭明
    • Organizer
      日本農芸化学会2016年度大会
    • Place of Presentation
      札幌コンベンションセンター(札幌市、北海道)
    • Year and Date
      2016-03-29
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] ピルビン酸デヒドロゲナーゼキナーゼの制御機構2015

    • Author(s)
      廣政恭明
    • Organizer
      日本農芸化学会西日本支部例会
    • Place of Presentation
      サントリー九州熊本工場
    • Year and Date
      2015-05-29
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] ピルビン酸デヒドロゲナーゼキナーゼの制御機構2015

    • Author(s)
      廣政恭明
    • Organizer
      日本農芸化学会西日本支部例会
    • Place of Presentation
      サントリ-九州熊本工場
    • Year and Date
      2015-05-29
    • Related Report
      2014 Research-status Report
    • Invited

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Published: 2014-04-04   Modified: 2019-03-29  

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