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Elucidation of the molecular mechanism of the pressure dependent fluorescence change of the YFP mutants toward the development of a pressure sensor.

Research Project

Project/Area Number 26650036
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Functional biochemistry
Research InstitutionOsaka University

Principal Investigator

Imada Katsumi  大阪大学, 理学(系)研究科(研究院), 教授 (40346143)

Co-Investigator(Renkei-kenkyūsha) WATANABE Nobuhisa  名古屋大学, シンクロトロン光研究センター, 教授 (70212321)
Project Period (FY) 2014-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2015: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2014: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords蛍光タンパク質 / 結晶構造 / 圧力 / メカノバイオロジー / 生体エネルギー変換 / X線結晶構造解析 / 蛍光蛋白質
Outline of Final Research Achievements

Glycine insertion in β7 of YFP dramatically changes its fluorescence property dependent on hydrostatic pressure. In this study, we determined the crystal structures of the mutants and measured their fluorescence spectra under high pressure. We found the flipping of the carbonyl oxygen of the chromophore with the conformationl changes of the residues surrounding the chromophore under high pressure. These conformations are similar to those of YFP at normal pressure, suggesting these conformational changes cause the pressure response on the fluorescence property.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • Research Products

    (6 results)

All 2016 2015 2014

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (5 results)

  • [Journal Article] Dependence of fluorescent protein brightness on protein concentration in solution and enhancement of it.2016

    • Author(s)
      Takamitsu J. Morikawa, Hideaki Fujita, Akira Kitamura, Takashi Horio, Johtaro Yamamoto, Masataka Kinjo, Akira Sasaki, Hiroaki Machiyama, Keiko Yoshizawa, Taro Ichimura, Katsumi Imada, Takeharu Nagai & Tomonobu M. Watanabe
    • Journal Title

      Scientific Reports

      Volume: 6 Issue: 1 Pages: 22342-22342

    • DOI

      10.1038/srep22342

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] YFP1残基挿入変異体の構造基盤と蛍光特性.2015

    • Author(s)
      田中るみか, 辻井美香, 垣塚太志, 慶澤景子, 川口辰也, 渡邉朋信, 今田勝巳.
    • Organizer
      第15回日本蛋白質科学会年会
    • Place of Presentation
      あわぎんホール
    • Year and Date
      2015-06-26
    • Related Report
      2015 Annual Research Report
  • [Presentation] YFP1残基挿入変異体の系統的な構造解析2014

    • Author(s)
      田中るみか, 慶澤景子, 渡邊朋信, 川口辰也, 今田勝巳.
    • Organizer
      第87回日本生化学会大会
    • Place of Presentation
      京都国際会議場
    • Year and Date
      2014-10-17
    • Related Report
      2014 Research-status Report
  • [Presentation] Systematic structural study of single amino acid insertion mutants of YFP2014

    • Author(s)
      Tanaka R, Yoshizawa K, Watanabe T, Kawaguchi T, Imada K
    • Organizer
      日本生物物理学会第52回年会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2014-09-27
    • Related Report
      2014 Research-status Report
  • [Presentation] Glycine-inserted mutant Forster resonance energy transfer (FRET) fluorescent protein to evaluate intracellular crowding2014

    • Author(s)
      Morikawa T, Machiyama H, Okamoto K, Yoshizawa K, Fujita H, Ichimura T, Imada K, Nagai T, Yanagida T, Watanabe T
    • Organizer
      日本生物物理学会第52回年会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2014-09-26
    • Related Report
      2014 Research-status Report
  • [Presentation] YFPの1残基挿入変異が引き起こす構造変化と蛍光特性2014

    • Author(s)
      田中るみか, 慶澤景子, 渡邉朋信, 川口辰也, 今田勝巳
    • Organizer
      第14回日本蛋白質科学会年会
    • Place of Presentation
      ワークピア横浜/横浜産貿ホールマリネリア
    • Year and Date
      2014-06-26
    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2017-05-10  

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