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Analysis on RNA virus sensing machinery in the cell nucleus

Research Project

Project/Area Number 26670225
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Virology
Research InstitutionKyoto University

Principal Investigator

Keizo Tomonaga  京都大学, ウイルス研究所, 教授 (10301920)

Project Period (FY) 2014-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2015: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2014: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywordsウイルス / 細胞核 / RNA / 自然免疫
Outline of Final Research Achievements

Viral RNAs are recognized by nucleic acid sensors in the cytoplasm of host cells. However, it is still unclear whether or not the host cells sense RNA virus infection inside the nuclear membrane. Here we demonstrate that host cells harbor the sensing machinery of intranuclear viral ribonucleoproteins (RNPs) leading to antiviral responses. We found that RNPs of intranuclear replicating RNA viruses, Borna disease virus and influenza virus, are recognized by IFI16 in the nucleus. Knockdown of IFI16 enhanced the replication of these viruses in the nucleus. Our data may provide a novel host machinery to recognize intranuclear non-self RNAs in the nucleus.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • Research Products

    (17 results)

All 2015 2014 Other

All Journal Article (6 results) (of which Peer Reviewed: 6 results,  Open Access: 5 results,  Acknowledgement Compliant: 3 results) Presentation (10 results) (of which Int'l Joint Research: 2 results,  Invited: 4 results) Remarks (1 results)

  • [Journal Article] Borna disease virus possesses an NF-kB inhibitory sequence in the nucleoprotein gene2015

    • Author(s)
      Makino A., Fujino K., Parrish NF., Honda T., Tomonaga K.
    • Journal Title

      Scientific Reports

      Volume: 5 Issue: 1 Pages: 8696-8696

    • DOI

      10.1038/srep08696

    • Related Report
      2015 Annual Research Report 2014 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] IFN-β-inducing, unusual viral RNA species produced by paramyxovirus infection accumulated into distinct cytoplasmic structures in an RNA-type-dependent manner.2015

    • Author(s)
      Yoshida A, Kawabata R, Honda T, Tomonaga K, Sakaguchi T, Irie T.
    • Journal Title

      Front Microbiol.

      Volume: 6 Pages: 804-804

    • DOI

      10.3389/fmicb.2015.00804

    • NAID

      120005818245

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Influenza A Virus-Induced Expression of a GalNAc Transferase, GALNT3, via MicroRNAs Is Required for Enhanced Viral Replication.2015

    • Author(s)
      Nakamura S, Horie M, Daidoji T, Honda T, Yasugi M, Kuno A, Komori T, Okuzaki D, Narimatsu H, Nakaya T, Tomonaga K.
    • Journal Title

      J Virol.

      Volume: 90 Issue: 4 Pages: 1788-801

    • DOI

      10.1128/jvi.02246-15

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Inhibition of Borna disease virus replication by an endogenous bornavirus-like element in the ground squirrel genome2014

    • Author(s)
      Fujino K, Horie M, Honda T, Merriman DK, Tomonaga K
    • Journal Title

      Proceedings of the National Academy of Sciences of the United States of America

      Volume: 111 Issue: 36 Pages: 13175-13180

    • DOI

      10.1073/pnas.1407046111

    • NAID

      120005477673

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Origin of endogenous bornavirus-like nucleoprotein elements in thirteen-lined ground squirrels2014

    • Author(s)
      Suzuki Y, Kobayashi Y, Horie M, Tomonaga K
    • Journal Title

      Genes Genet. Syst.

      Volume: 89 Pages: 143-148

    • NAID

      130004703733

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Heat stress is a potent stimulus for enhancing rescue efficiency of recombinant Borna disease virus2014

    • Author(s)
      Kojima S, Honda T, Matsumoto Y, Tomonaga K
    • Journal Title

      Microbiology and Immunology

      Volume: 58 Issue: 11 Pages: 636-642

    • DOI

      10.1111/1348-0421.12193

    • NAID

      120005661577

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] ボルナウイルス:RNAウイルスによる細胞核ヒッチハイキング2015

    • Author(s)
      朝長啓造
    • Organizer
      日本分子生物学会BMB2015
    • Place of Presentation
      神戸
    • Year and Date
      2015-12-01
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] Exploring the Host Mechanisms that Impact RNA Virus Replication in the Cell Nucleus2015

    • Author(s)
      Tomonaga K
    • Organizer
      第6回広島カンファレンス
    • Place of Presentation
      広島
    • Year and Date
      2015-10-23
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] A novel RNA virus vector system for small RNA delivery based on Borna disease virus.2015

    • Author(s)
      Honda T, Yamamoto Y, Makino A, and Tomonaga K
    • Organizer
      The European Society of Gene and Cellular Therapy and Finland Society of Gene Therapy Collaborative Congress
    • Place of Presentation
      Helsinki
    • Year and Date
      2015-09-17
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Identification of host surveillance system for RNA viruses in the nucleus2015

    • Author(s)
      本田知之
    • Organizer
      第10回研究所ネットワーク国際シンポジウム
    • Place of Presentation
      札幌
    • Year and Date
      2015-07-23
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] IGF2 is involved in the regulation of Borna disease virus production.2015

    • Author(s)
      Makino A, Honda T, and Tomonaga K
    • Organizer
      Negative Strand Viruses 2015
    • Place of Presentation
      Siena Italy
    • Year and Date
      2015-06-14
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 内在性ボルナウイルス様エレメントの非コードRNAとしての生理機能解明2014

    • Author(s)
      本田知之、小嶋将平、朝長啓造
    • Organizer
      第37回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2014-11-25 – 2014-11-27
    • Related Report
      2014 Research-status Report
  • [Presentation] ボルナ病ウイルス粒子産生に対する宿主因子IGF2の関与2014

    • Author(s)
      牧野晶子、藤野寛、平井悠哉、惣福梢、本田知之、朝長啓造
    • Organizer
      第62回日本ウイルス学会学術集会
    • Place of Presentation
      横浜
    • Year and Date
      2014-11-10 – 2014-11-12
    • Related Report
      2014 Research-status Report
  • [Presentation] ヒト内在性ボルナウイルス様Nエレメントのエピジェネティック制御機構2014

    • Author(s)
      惣福梢、本田知之、小嶋将平、朝長啓造
    • Organizer
      第62回日本ウイルス学会学術集会
    • Place of Presentation
      横浜
    • Year and Date
      2014-11-10 – 2014-11-12
    • Related Report
      2014 Research-status Report
  • [Presentation] ムチン型糖転移酵素Galnt3ノックアウトマウスを用いたA型インフルエンザウイルス感染動態の解析2014

    • Author(s)
      中村祥子、堀江真行、大道寺智、本田知之、中屋隆明、小守壽文、朝長啓造
    • Organizer
      第62回日本ウイルス学会学術集会
    • Place of Presentation
      横浜
    • Year and Date
      2014-11-10 – 2014-11-12
    • Related Report
      2014 Research-status Report
  • [Presentation] Bornavirus infection: a unique life style of an animal RNA virus in the DNA habitat2014

    • Author(s)
      Keizo Tomonaga
    • Organizer
      DNA habitats and its RNA inhabitants
    • Place of Presentation
      Salzburg
    • Year and Date
      2014-07-03 – 2014-07-05
    • Related Report
      2014 Research-status Report
    • Invited
  • [Remarks] 京都大学ウイルス研究所 朝長研究室HP

    • URL

      http://www.virus.kyoto-u.ac.jp/Lab/tomonaga-hp/index.html

    • Related Report
      2015 Annual Research Report 2014 Research-status Report

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Published: 2014-04-04   Modified: 2017-05-10  

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