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Development of far-red absorbing fluorescent probes and photoconvertible switches for organ-level bio-imaging and optogenetics

Research Project

Project/Area Number 26702036
Research Category

Grant-in-Aid for Young Scientists (A)

Allocation TypePartial Multi-year Fund
Research Field Chemical biology
Research InstitutionShizuoka University

Principal Investigator

Narikawa Rei  静岡大学, 理学部, 講師 (30456181)

Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥23,790,000 (Direct Cost: ¥18,300,000、Indirect Cost: ¥5,490,000)
Fiscal Year 2016: ¥6,240,000 (Direct Cost: ¥4,800,000、Indirect Cost: ¥1,440,000)
Fiscal Year 2015: ¥8,580,000 (Direct Cost: ¥6,600,000、Indirect Cost: ¥1,980,000)
Fiscal Year 2014: ¥8,970,000 (Direct Cost: ¥6,900,000、Indirect Cost: ¥2,070,000)
Keywordsオプトジェネティクス / 遠赤色光 / cAMP / シアノバクテリオクロム / 蛍光バイオイメージング / 蛍光プローブ
Outline of Final Research Achievements

In this project, we focused on cyanobacterial photoreceptors, cyanobacteriochromes (CBCRs), to develop small photo-switches and fluorescent probes that bind biliverdin (BV) and absorb far-red light. Because BV is an intrinsic chromophore in mammalian cells and far-red light can penetrate into deep animal tissues, BV-binding ones are beneficial for optogenetics and bio-imaging tools. We succeeded in discovering novel BV-binding CBCRs showing far-red/orange reversible photoconversion and in developing BV-binding CBCRs based on non-BV-binding ones to introduce several mutations. Further, we also identified dark-reversion type CBCRs and a CBCR with large spectral shift. Based on these molecules, we succeeded in light regulation of cAMP synthesis in vitro and far-red fluorescence detection from mammalian cells.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • Research Products

    (16 results)

All 2017 2016 2015 2014

All Journal Article (7 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 7 results,  Open Access: 2 results,  Acknowledgement Compliant: 6 results) Presentation (8 results) (of which Int'l Joint Research: 2 results,  Invited: 3 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] Distinctive Properties of Dark Reversion Kinetics between Two Red/Green-Type Cyanobacteriochromes and their Application in the Photoregulation of cAMP Synthesis2017

    • Author(s)
      Fushimi K, Enomoto G, Ikeuchi M, Narikawa R.
    • Journal Title

      Photochem. Photobiol.

      Volume: 93 Issue: 3 Pages: 681-691

    • DOI

      10.1111/php.12732

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] The Expanded Red/Green Cyanobacteriochrome Lineage: An Evolutionary Hot spot2017

    • Author(s)
      Fushimi K, Ikeuchi M, Narikawa R.
    • Journal Title

      Photochem. Photobiol.

      Volume: 93 Issue: 3 Pages: 903-906

    • DOI

      10.1111/php.12764

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Photoconversion and Fluorescence Properties of a Red/Green-Type Cyanobacteriochrome AM1_C0023g2 That Binds Not Only Phycocyanobilin But Also Biliverdin.2016

    • Author(s)
      Fushimi K, Nakajima T, Aono Y, Yamamoto T, Ni-Ni-Win, Ikeuchi M, Sato M, Narikawa R.
    • Journal Title

      Front. Microbiol.

      Volume: 7 Pages: 588-588

    • DOI

      10.3389/fmicb.2016.00588

    • NAID

      120005941618

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Cyanobacteriochrome Photoreceptors Lacking the Canonical Cys Residue.2016

    • Author(s)
      Fushimi K, Rockwell NC, Enomoto G, Ni-Ni-Win, Martin SS, Gan F, Bryant DA, Ikeuchi M, Lagarias JC, Narikawa R.
    • Journal Title

      Biochemistry

      Volume: 55 Issue: 50 Pages: 6981-6995

    • DOI

      10.1021/acs.biochem.6b00940

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Red-shifted red/green-type cyanobacteriochrome AM1_1870g3 from the chlorophyll d-bearing cyanobacterium Acaryochloris marina.2015

    • Author(s)
      Narikawa R, Fushimi k, Ni-Ni-Win, Ikeuchi M.
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 461 Issue: 2 Pages: 390-395

    • DOI

      10.1016/j.bbrc.2015.04.045

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] A biliverdin-binding cyanobacteriochrome from the chlorophyll d–bearing cyanobacterium Acaryochloris marina2015

    • Author(s)
      Rei Narikawa, Takahiro Nakajima, Yuki Aono, Keiji Fushimi, Gen Enomoto, Ni-Ni-Win, Shigeru Itoh,Moritoshi Sato, Masahiko Ikeuchi
    • Journal Title

      SCIENTIFIC REPORTS

      Volume: 5 Issue: 1 Pages: 7950-7950

    • DOI

      10.1038/srep07950

    • NAID

      120005838624

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A new type of dual-Cys cyanobacteriochrome GAF domain found in cyanobacterium Acaryochloris marina, which has an unusual red/blue reversible photoconversion cycle.2014

    • Author(s)
      Narikawa R., Enomoto G., Ni-Ni-Win, Fushimi K., Ikeuchi M.
    • Journal Title

      Biochemistry

      Volume: 53 Issue: 31 Pages: 5051-5059

    • DOI

      10.1021/bi500376b

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] 光合成微生物・シアノバクテリアからの新規光センサーの発見とその応用利用2016

    • Author(s)
      成川礼
    • Organizer
      2015年度第2回バイオ単分子研究会
    • Place of Presentation
      いわき湯本温泉 新つた(福島県いわき湯本)
    • Year and Date
      2016-03-30
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] シアノバクテリアの光応答戦略2016

    • Author(s)
      成川礼
    • Organizer
      2016年度日本ブランクトン学会春期シンポジウム
    • Place of Presentation
      東京大学本郷キャンパス(東京都文京区)
    • Year and Date
      2016-03-14
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] シアノバクテリア由来の光受容体を利用したオプトジェネティクスツールの開発2016

    • Author(s)
      成川 礼
    • Organizer
      第39回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Related Report
      2016 Annual Research Report
  • [Presentation] クロロフィルdにより長波長の光で光合成を行うシアノバクテリアAcaryochloris marinaは、感知する光も長波長の光なのか?2015

    • Author(s)
      成川礼
    • Organizer
      藍藻の分子生物学2015
    • Place of Presentation
      かずさアカデミアパーク(千葉県木更津市)
    • Year and Date
      2015-11-16
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] クロロフィルdを持つシアノバクテリアAcaryochloris marinaの光受容体シアノバクテリオクロムの解析2015

    • Author(s)
      成川礼、伏見圭司、榎本元、池内昌彦
    • Organizer
      日本植物学会第79回大会
    • Place of Presentation
      朱鷺メッセ(新潟県新潟市)
    • Year and Date
      2015-09-06
    • Related Report
      2015 Annual Research Report
  • [Presentation] Development of red/far-red light-responsive cAMP-synthetic switches2015

    • Author(s)
      Fushimi K, Enomoto G, Ikeuchi M, Narikawa R
    • Organizer
      15th International Symposium on Phototrophic Prokaryotes
    • Place of Presentation
      チュービンゲン、ドイツ
    • Year and Date
      2015-08-02
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Cyanobacteriochromes with unique spectral features from the chloro-phyll d-bearing cyanobacetrium Acaryochloris marina2015

    • Author(s)
      Narikawa R, Fushimi K, Enomoto G, Ni-Ni-Win, Ikeuchi M
    • Organizer
      15th International Symposium on Phototrophic Prokaryotes
    • Place of Presentation
      チュービンゲン、ドイツ
    • Year and Date
      2015-08-02
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 赤・遠赤色光スイッチ型 cAMP 合成酵素の開発2015

    • Author(s)
      伏見圭司、榎本元、池内昌彦、成川礼
    • Organizer
      日本農芸化学会2015年度大会
    • Place of Presentation
      岡山市、岡山県、岡山大学津島キャンパス
    • Year and Date
      2015-03-26 – 2015-03-29
    • Related Report
      2014 Annual Research Report
  • [Patent(Industrial Property Rights)] 蛍光特性を有する複合体2014

    • Inventor(s)
      成川礼、佐藤守俊、池内昌彦
    • Industrial Property Rights Holder
      静岡大学
    • Industrial Property Rights Type
      特許
    • Filing Date
      2014-10-01
    • Related Report
      2014 Annual Research Report

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Published: 2014-04-04   Modified: 2018-03-22  

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