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1997 Fiscal Year Final Research Report Summary

STUDY ON ECOLOGY AND EVOLUTION OF ROTAVIRUS

Research Project

Project/Area Number 07041164
Research Category

Grant-in-Aid for international Scientific Research

Allocation TypeSingle-year Grants
SectionField Research
Research Field Virology
Research InstitutionSapporo Medical University

Principal Investigator

URASAWA Shozo  Sapporo Med.Univ., Dept.of Hygiene, Professor, 医学部, 教授 (00045379)

Co-Investigator(Kenkyū-buntansha) WU Huixia  Tongji Med.Univ., Dept.of Environ, Microbioly., Associate Professor, 助教授
PONGSUWANNA Yaowapa  NIH,Thailand, Enteric Virus Laboratory, Chief, 室長
KOBAUYASHI Nobumichi  Sapporo Med.Univ., Dept.of Hygiene, Assistant Professor, 医学部, 講師 (80186759)
URASAWA Tomoko  Sapporo Med.Univ., Dept.of Nursing, Professor, 保健医療学部, 教授 (90045378)
TANIGUCHI Koki  Sapporo Med.Univ., Dept.of Hygiene, Associate Professor, 医学部, 助教授 (40094213)
Project Period (FY) 1995 – 1997
KeywordsHUMAN ROTAVIRUS / ANIMAL ROTAVIRUS / PEDIATRIC DIARRHEA / VIRAL ANTIGEN / VIRAL GENE / GENE SEQUENCE / EVOLUTION
Research Abstract

We collected fecal specimens from humans (mostly pediatric diarrhea cases) and animals in 4 Asian cuontries. With these specimens, screening of rotavirus (RV), antigenis characterization (by ELISA and PCR) of RVs detected, isolation of selected RV strains, and nucleotide sequence determination of genome segment of selected strains were carried out in order to elucidate the epidemiology of human rotavirus infections and the ecology and evolution of rotaviruses in human and mammals.
1.In Wuhan, China, 3050 diarrhea samples were collected between 1995 and 1997. Nine hundred thirty-six specimens (31%) positive for group ARV were subjected to further antigenic and genetic analysis mentioned above. While serotype G1 strains predominated throughout the study period, the serotype distribution of human RVs differed markedly from year to year. No G4 strain was detected. A few strains having antigenic properties unusual for human RV were examined for the nucleotide sequence of VP8 and NSP5 gene se … More gments. It was of note that the NSP5 sequence of two Chinese strain was more closely related to that of porcine than to human RVs.
2.In Muntinlupa, Philippines, 906 samples were collected from patients with diarrhea between 1995 and 1997. One hundred eighty-one samples (19.9%) were RV-positive. During the study period dominant serotype of RV changed rapidly from G1 to G2, then to G4 and lastly to G3. However, G12 strains, which had been reported to be prevalent only in Philippines at the end of 1987, were not detected in the present study. Besides these, one strain esch of group, C RV and picobirna virua was found.
3.In 560 fecal specimens collected from piglets in Thailand, 23 group A RVs, 1 group B RV,2 group C RVs and 2 picobirna birusres were detected. Fourteen (61%) of 23 group A RVs were serotype G10 which hitherto has not been found in porcine RVs.Comparative sequence analysis of VP4 and VP7 genes together with RNA-RNA hybridization showed that these G10 porcine strain were very closely related to G10 bovine RVs isoland previously in the same country, indicating strongly transmission of RV between cows and pigs. The serotype distribution of human RVs were also examined with 171 human RV-positive specimens collected in Bangkok.
4.Screening of animal rotavirus in Bangladesh with 590 porcine and 270 bovine fecal specimens as well as 50 specimens from other animals gave negative result except for the detection of 2 porcine and one bovine RVs. Human specimens were also collected from 840 diarrhea patients in Mymensingh, Bangladesh. One hundred twelve RV-positive specimens were examined for their serotypes. Detected serotypes were G1, G2 and G4 in order of frequency. Less

  • Research Products

    (28 results)

All Other

All Publications (28 results)

  • [Publications] Koki Taniguchi: "Nondefective rotavirus mutants with an NSP1 gene which has a deletion of 500 nucleotides,including a cysteine-rich zinc finger motif-encoding region(nucleotides 156 to 248),or which has a nonsense codon at nucleotides 153 to 155." J.Virol.70. 4125-4130 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kazunobu Kojima: "Species-specific and interspecies relatedness of NSP1 sequences in human,porcine,feline,and equine rotavirus strains." Arch.Virol.141. 1-12 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nobumichi Kobayashi: "Selection of rotavirus VP7 gene in the genetic background of simian rotavirus SA11:implications for rotavirus reassortant vaccine development." Antiviral Res.31. 185-190 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nobumichi Kobayashi: "G(VP7)serotype-dependent preferential VP7 gene selection detected in the genetic background of simian rotavirus SA11" Arch.Virol.141. 1167-1176 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Yaowapa Pongsuwanna: "Serological and genomic characterization of porcine rotaviruses in Thailand:detection of a G10 porcine rotavirus." J.Clin.Microbiol.34. 1050-1057 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kazunobu Kojima: "Sequence analysis of normal and rearranged NSP5 genes from human rotavirus strains isolated in nature:implications for the occurrence of the rearrangement at the step of plus strand synthesis." Virology. 224. 446-452 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Koki Taniguchi: "Structure and function of rotavirus NSP1." Arch.Virol. 12[Supple]. 53-58 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H.Ishizaki: "The distribution of G and P types within isolates of bovine rotavirus in Japan." Vet.Microbiol.48. 367-372 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Shuji Nakata: "Outbreaks of nosocomial rotavirus gastro-enteritis in a paediatric ward." Eur.J.Pediatr.155. 954-958 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H.Sakawaki: "Occurrence of a single type strain(G3,P[12])of equine rotavirus in foals on a racehorse farm from 1986 to 1993." Res.Bull.Obihiro Univ.20. 103-111 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Mitsutaka Kuzuya: "Survey of human Group C royaviruses in Japan during the winter of 1992 to 1993." J.Clin.Microbiol.36. 6-10 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Huixia Wu: "Serological and genomic characterization of human rotaviruses detected in China" J.Med.Virol.(in press).

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Jun-ichi Okada: "Preferential selection of heterologous G3-VP7 gene in the genetic background of simian rotavirus SA11 detected by using a homotypic single-VP7 gene substitution reassortant." Antiviral Res.(in press).

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 谷口 孝喜: "ウイルス学 「レオウイルス」" 朝倉書店(畑中正一 編)(in press),

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 浦沢 正三: "微生物学教科書「ロタウイルス・レオウイルス」" 文光堂(畑中正三・嶋田甚五郎 編)(in press),

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K.Taniguchi, K.Kojima, S.Urasawa: "Nondefective rotavirus mutants with an NSP1 gene which has a deletion of 500 nucleotides, including a cysteine-rich zinc finger motif-encoding region (nucleotides 156 to 248), or which has a nonsense codon at nucleotides 153 to 155." J.Virol. 70. 4125-4130 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Kojima, K.Taniguchi, N.Kabayashi: "Species-specific and interspecies relatedness of NSP1 sequences in human, porcine, feline, and equine rotavirus strains." Arch.Virol.141. 1-12 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] N.Kabayashi, J.Okada, K.Taniguchi, T.Urasawa, S.Urasawa: "Selection of rotavirus VP7 gene in the genetic background of simian rotavirus SA11 : implications for rotavirus reassortant vaccine development." Antiviral Res.31. 185-190 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] N.Kabayashi, K.Taniguchi, K.Kojima, T.Urasawa, S.Urasawa: "G (VP7) serotype-dependent preferential VP7 gene selection detected in the genetic background of simian rotavirus SA11" Arch.Virol.141. 1167-1176 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Pongsuwanna, K.Taniguchi, M.Chiwakul, T.Urasawa, F.Wakasugi, C.Jayavasu, S.Urasawa: "Serological and genomic characterization of porcine rotaviruses in Thailand : detection of a G10 porcine rotavirus." J.Clin.Microbiol.34. 1050-1057 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Kojima, K.Taniguchi, T.Urasawa, S.Urasawa: "Sequence analysis of normal and rearranged NSP5 genes from human rotavirus strains isolated in nature : implication for the occurrence of the rearrangement at the step of plus strand synthesis." Virology. 224. 446-452 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Taniguchi, K.Kojima, N.Kobayashi, T.Urasawa, S.Urasawa: "Structure and function of rotavirus NSP1." Arch.Virol.12 [Supple]. 53-58 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H.Ishizaki, T.Sakai, T.shirahata, K.Taniguchi, T.Urasawa, S.Urasawa, H.Goto: "The distribution of G and P types within isolates of bovine rotavirus in Japan." Vet.Microbiol.48. 367-372 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] S.Nakata, N.Adachi, S.Ukae, K.Kogawa, K.Numata, S.Urasawa, S.Chiba: "Outbresks of nosocomial rotavirus gastro-enteritis in a paediatric ward." Eur.J.Pediatr.155. 954-958 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H.Sakawaki, H.Ishizaki, M.Takagi, G.Masuda, K.Taniguchi, T.Urasawa, S.Urasawa, H.Goto, T.Shirahata: "Occurrence of a single type strain (G3, P[12]) of equine rotavirus in foals on a racehorse farm from 1986 to 1993." Res.Bull.Obihiro Univ.20. 103-111 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M.Kazuya, R.Fijii, M.Hamano, M.Yamada, K.Shinozaki, A.Sasagawa, S.Hasegawa, H.Kawamoto, K.Matsumoto, A.Kawamoto, A.Itagaki, S.Funatsumaru, S.Urasawa: "Survey of human Group Crotaviruses in Japan during the winter of 1992 to 1993." J.Clin.Microbiol.36. 6-10 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H.Wu, K.Taniguchi, T.Urasawa, S.Urasawa: "Serological and genomic characterization of human rotaviruses detected in China" J.Med.Virol. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] J.Okada, N.Kabayashi, K.Taniguchi, S.Urasawa: "Preferential selection of heterologous G3-VP7 gene in the genetic backgroud of simian rotavirus SA11 detected by using a homotypic single-VP7 gene substitution reassortant." Antiviral Res. (in press).

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 1999-03-16  

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