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2000 Fiscal Year Final Research Report Summary

Regulation of initiation of chromosome replication

Research Project

Project/Area Number 08277101
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Research InstitutionGraduate School of Science, Osaka University

Principal Investigator

TAKISAWA Haruhiko  Graduate School of Science, Osaka University Professor, 大学院・理学研究科, 教授 (60154944)

Co-Investigator(Kenkyū-buntansha) MASUKATA Hisao  Graduate School of Science, Osaka University, Professor, 大学院・理学研究科, 教授 (00199689)
SHINOMIYA Tomoyuki  Mitsubishi Kase Institute of Life Sciences, Project Leader Scientist, 主任研究員
MATSUKAGE Akio  Graduate School of Science, Japan Women's University, Professor, 理学部, 教授 (90019571)
SHIRAHIGE Katsuhiko  Graduate School of Biological Sciences, Nara Advanced Institute of Science and Technology, Associate Professor, バイオサイエンス研究科, 助教授 (90273854)
MASAI Hisao  Institute of Medical Science, University of Tokyo, Associate Professor, 医科学研究所・分子生物学研究部, 助教授 (40229349)
Project Period (FY) 1996 – 1999
Keywordschromosome replication / replication origin / replication initiation apparatus / regulation of initiation / replication-related gene
Research Abstract

The ultimate goal of this research proposal is to understand the mechanisms of regulation of replication initiation in both prokaryotes and eukaryotes.
This research group has investigated three aspects of replication initiation ; the origin of replication, the components of replication initiation, and the regulation of initiation. During this research period, origin regions of replication were precisely analyzed in chromosomes of Schizosaccharomyces pombe, and Drosophila melanogaster. In Saccharomyces cerevisiae, the firing timing of every origins on a whole chromosome was thoroughly investigated, revealing the control mechanisms of initiation of DNA replication at chromosomal level. As to the components of replication initiation, homologues of proteins (ORC, MCM, Cdc45, etc.) essential for initiation of chromosome replication have been shown to be conserved in eukaryotic species. In particular, Cdc45 has been found to play a crucial role in the unwinding of origin DNA and recruiting DNA polymerase alpha onto the unwound DNA.As to the regulation of initiation, S-phase promoting kinases have been shown to play a universal role in the regulation of initiation through the phosphorylation of target proteins. With Drosophila melanogaster, two types of transcription factors have been shown to be involved in the trasncription of replication-related genes. Further, studies on regulatory mechanisms of replication initiation in E.coli reveals that the function of initiator protein is regulated by DNA polymerase.

  • Research Products

    (58 results)

All Other

All Publications (58 results)

  • [Publications] Mizushima,T., N.Takahashi, et al.: "Cdc6p modulates the structure and DNA binding activity of the origin recognition complex in vitro."Genes Dev. 14. 1631-1641 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Mimura,S., T.Masuda, et al.: "Central role for cdc45 in establishing an initiation complex of DNA replication in Xenopus egg extracts."Genes Cells. 5. 439-452 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Tanaka, K., T.Yonekawa, et al.: "Fission yeast Esolp is required for establishing sister chromatid cohesion during S phase."Mol Cell Biol. 20. 3459-3469 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Uga,H., F.Matsunaga, et al.: "Regulation of DNA replication by iterons : an interaction between the ori2 and incC regions mediated by RepE -bound iterons inhibits DNA replication of mini F plasmid in Escherichia coli."EMBO J. 18. 3856-3867 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ogawa,Y., T.Takahashi, et al.: "Association of fission yeast Orp1 and Mcm6 proteins with chromosomal replication origins."Mol Cell Biol. 19. 7228-7236 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kohzaki,H., Y.Ito, et al.: "Context-dependent modulation of replication activity of Saccharomyces cerevisiae autonomously replicating sequences by transcription factors."Mol Cell Biol. 19. 7428-7435 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Hirose,F., M.Yamaguchi, et al.: "Targeted expression of the DNA binding domain of DRE-binding factor, a Drosophila transcription factor, attenuates DNA replication of the salivary gland and eye imaginal disc."Mol Cell Biol. 19. 6020-6028 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sasaki,T., T.Sawado, et al.: "Specification of regions of DNA replication initiation during embryogenesis in the 65-kilobase DNApolalpha-dE2F locus of Drosophila melanogaster."Mol Cell Biol. 19. 547-555 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Komori,H., F.Matsunaga, et al.: "Crystal structure of a prokaryotic replication initiator protein bound to DNA at 2.6 A resolution."EMBO J. 18. 4597-4607 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Takeda,T., K.Ogino, et al.: "A fission yeast gene, him1(+)/dfp1(+), encoding a regulatory subunit for Hsk1 kinase, plays essential roles in S-phase initiation as well as in S-phase checkpoint control and recovery from DNA damage."Mol Cell Biol. 19. 5535-5547 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Fujita,M., C.Yamada, et al.: "Cell cycle regulation of human CDC6 protein. Intracellular localization, interaction with the human mcm complex, and CDC2 kinase-mediated hyperphosphorylation."J Biol Chem. 274. 25927-25932 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kurokawa,K., S.Nishida, et al.: "Replication cycle-coordinated change of the adenine nucleotide-bound forms of DnaA protein in Escherichia coli."EMBO J. 18. 6642-6652 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Hirose,F., M.Yamaguchi, et al.: "A novel growth- and cell cycle-regulated protein, ASK, activates human Cdc7-related kinase and is essential for G1/S tratasition in mammalian cells."Mol Cell Biol. 19. 5083-5095 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sasaki,T., T.Sawado, et al.: "Clustered adenine/thymine stretches are essential for function of a fission yeast replication origin."Mol Cell Biol. 19. 6699-6709 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Komori,H., F.Matsunaga, et al.: "A DNA unwinding factor involved in DNA replication in cell-free extracts of Xenopus eggs."EMBO J. 9. 341-350 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Takeda,T., K.Ogino, et al.: "Xenopus Cdc45-dependent loading of DNA polymerase alpha onto chromatin under the control of S-phase Cdk."Mol Cell Biol. 17. 5699-5707 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Fujita,M., C.Yamada, et al.: "Functional domains of rep2, a transcriptional activator subunit for Res2-Cdc 10, controlling the cell cycle "start"."J Biol Chem. 9. 1577-1588 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kurokawa,K., S.Nishida, et al.: "Regulation of DNA-replication origins during cell-cycle progression."EMBO J. 395. 618-621 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Fujita,M., Y.Hori, et al.: "Cell cycle dependent topological changes of chromosomal replication origins in Saccharomyces cerevisiae."Genes Cells. 3. 737-749 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Katayama,T., T.Kubota, et al.: "The initiator function of DnaA protein is negatively regulated by the sliding clamp of the E.coli chromosomal replicase."Cell. 94. 61-71 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Akamatsu,E., T.Tanaka, et al.: "Transcription factor E2F and cyclin E-Cdk2 complex cooperate to induce chromosomal DNA replication in Xenopus oocytes."J Biol Chem. 273. 16494-16500 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Yamashita,M., Y.Hori, et al.: "The efficiency and timing of initiation of replication of multiple replicons of Saccharomyces cerevisiae chromosome VI."Genes Cells. 2. 655-665 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sato,N., K.Arai, et al.: "Human and Xenopus cDNAs encoding budding yeast Cdc7-related kinases : in vitro phosphorylation of MCM subunits by a putative human homologue of Cdc7."EMBO J. 16. 4340-4351 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kubota,Y., S.Mimura, et al.: "Licensing of DNA replication by a multi-protein complex of MCM/P1 proteins in Xenopus eggs."EMBO J. 16. 3320-3331 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Hayashi,Y., F.Hirose, et al.: "Identification of CFDD (common regulatory factor for DNA replication and DREF genes) and role of its binding site in regulation of the proliferating cell nuclear antigen gene promoter."J Biol Chem. 272. 22848-22858 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Hori,Y., K.Shirahige, et al.: "Characterization of a novel CDC gene (ORC1) partly homologous to CDC6 of Saccharomyces cerevisiae."Mol Biol Cell. 7. 409-418 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Hirose,F., M.Yamaguchi, et al.: "Isolation and characterization of cDNA for DREF, a promoter-activating factor for Drosophila DNA replication-related genes."J Biol Chem. 271. 3930-3937 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Obuse,C., Y.Okuno, et al.: "A replication-enhancing element with transcriptional silencer activity in autonomously replicating human chromosomal fragments."Mol Biol Cell. 7. 43-55 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Murakami,Y., J.A.Huberman, et al.: "Identification, purification, and molecular cloning of autonomously replicating sequence-binding protein 1 from fission yeast Schizosaccharomyces pombe."Proc Natl Acad Sci USA. 93. 502-507 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Mizushima, T., N.Takahashi and B.Stillman: "Cdc6p modulates the structure and DNA binding activity of the origin recognition complex in vitro."Genes Dev. 14. 1631-1641 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Mimura, S., T.Masuda, T.Matsui and H.Takisawa: "Central role for cdc45 in establishing an initiation complex of DNA replication in Xenopus egg extracts."Genes Cells. 5. 439-452 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Tanaka, K., T.Yonekawa, Y.Kawasaki, M.Kai, K.Furuya, M.Iwasaki, H.Murakami, M.Yanagida and H.Okayama: "Fission yeast Esolp is required for establishing sister chromatid cohesion during S phase."Mol Cell Biol. 20. 3459-3469 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Uga, H., F.Matsunaga and C.Wada: "Regulation of DNA replication by iterons : an interaction between the ori2 and incC regions mediated by RepE-bound iterons inhibits DNA replication of miniF plasmid in Escherichia coli."EMBO J. 18. 3856-3867 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ogawa, Y., T.Takahashi and H.Masukata: "Association of fission yeast Orp1 and Mcm6 proteins with chromosomal replication origins."Mol Cell Biol. 19. 7228-7236 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kohzaki, H., Y.Ito and Y.Murakami: "Context-dependent modulation of replication activity of Saccharomyces cerevisiae autonomously replicating sequences by transcription factors."Mol Cell Biol. 19. 7428-7435 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Hirose, F., M.Yamaguchi and A.Matsukage: "Targeted expression of the DNA binding domain of DRE-binding factor, a Drosophila transcription factor, attenuates DNA replication of the salivary gland and eye imaginal disc."Mol Cell Biol. 19. 6020-6028 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Sasaki, T., T.Sawado, M.Yamaguchi and T.Shinomiya: "Specification of regions of DNA replication initiation during embryogenesis in the 65-kilobase DNApolalpha-dE2F locus of Drosophila melanogaster."Mol Cell Biol. 19. 547-555 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Komori, H., F.Matsunaga, Y.Higuchi, M.Ishiai, C.Wada and K.Miki: "Crystal structure of a prokaryotic replication initiator protein bound to DNA at 2.6 A resolution."EMBO J. 18. 4597-4607 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Takeda, T., K.Ogino, E.Matsui, M.K.Cho, H.Kumagai, T.Miyake, K.Arai and H.Masai: " A fission yeast gene, him1 (+)/dfp1 (+), encoding a regulatory subunit for Hsk1 kinase, plays essential roles in S-phase initiation as well as in S-phase checkpoint control and recovery from DNA damage."Mol Cell Biol. 19. 5535-5547 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Fujita, M., C.Yamada, H.Goto, N.Yokoyama, K.Kuzushima, M.Inagaki and T.Tsurumi: "Cell cycle regulation of human CDC6 protein. Intracellular localization, interaction with the human mcm complex, and CDC2 kinase-mediated hyperphosphorylation."J Biol Chem. 274. 25927-25932 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kurokawa, K., S.Nishida, A.Emoto, K.Sekimizu and T.Katayama: "Replication cycle-coordinated change of the adenine nucleotide-bound forms of DnaA protein in Escherichia coli."EMBO J. 18. 6642-6652 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kumagai, H., N.Sato, M.Yamada, D.Mahony, W.Seghezzi, E.Lees, K.Arai and H.Masai: "A novel growth- and cell cycle-regulated protein, ASK, activates human Cdc7-related kinase and is essential for G1/S transition in mammalian cells."Mol Cell Biol. 19. 5083-5095 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Okuno, Y., H.Satoh, M.Sekiguchi and H.Masukata: "Clustered adenine/thymine stretches are essential for function of a fission yeast replication origin."Mol Cell Biol. 19. 6699-6709 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Okuhara, K., K.Ohta, H.Seo, M.Shioda, T.Yamada, Y.Tanaka, N.Dohmae, Y.Seyama, T.Shibata and H.Murofushi: "A DNA unwinding factor involved in DNA replication in cell-free extracts of Xenopus eggs."Curr Biol. 9. 341-350 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Mimura, S.and H.Takisawa: "Xenopus Cdc45-dependent loading of DNA polymerase alpha onto chromatin under the control of S-phase Cdk."EMBO J. 17. 5699-5707 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Tahara, S., K.Tanaka, Y.Yuasa and H.Okayama: "Functional domains of rep2, a transcriptional activator subunit for Res2-Cdc 10, controlling the cell cycle "start"."Mol Biol Cell. 9. 1577-1588 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Shirahige, K., Y.Hori, K.Shiraishi, M.Yamashita, K.Takahashi, C.Obuse, T.Tsurimoto and H.Yoshikawa: "Regulation of DNA-replication origins during cell-cycle progression."Nature. 395. 618-621 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Fujita, M., Y.Hori, K.Shirahige, T.Tsurimoto, H.Yoshikawa and C.Obuse: "Cell cycle dependent topological changes of chromosomal replication origins in Saccharomyces cerevisiae."Genes Cells. 3. 737-749 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Katayama, T., T.Kubota, K.Kurokawa, E.Crooke and K.Sekimizu: "The initiator function of DnaA protein is negatively regulated by the sliding clamp of the E.coli chromosomal replicase."Cell. 94. 61-71 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Akamatsu, E., T.Tanaka and J.Y.Kato: "Transcription factor E2F and cyclin E-Cdk2 complex cooperate to induce chromosomal DNA replication in Xenopus oocytes."J Biol Chem. 273. 16494-16500 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Yamashita, M., Y.Hori, T.Shinomiya, C.Obuse, T.Tsurimoto, H.Yoshikawa and K.Shirahige: "The efficiency and timing of initiation of replication of multiple replicons of Saccharomyces cerevisiae chromosome VI."Genes Cells. 2. 655-665 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Sato, N., K.Arai and H.Masai: "Human and Xenopus cDNAs encoding budding yeast Cdc7-related kinases : in vitro phosphorylation of MCM subunits by a putative human homologue of CdC7."EMBO J. 16. 4340-4351 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kubota, Y., S.Mimura, S.Nishimoto, T.Masuda, H.Nojima and H.Takisawa: "Licensing of DNA replication by a multi-protein complex of MCM/Pl proteins in Xenopus eggs."EMBO J. 16. 3320-3331 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Hayashi, Y., F.Hirose, Y.Nishimoto, M.Shiraki, M.Yamagishi, A.Matstukage and M.Yamaguchi: "Identification of CFDD (common regulatory factor for DNA replication and DREF genes) and role of its binding site in regulation of the proliferating cell nuclear antigen gene promoter."J Biol Chem. 272. 22848-22858 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Hori, Y., K.Shirahige, C.Obuse, T.Tsurimoto and H.Yoshikawa: "Characterization of a novel CDC gene (ORC1) partly homologous to CDC6 of Saccharomyces cerevisiae."Mol Biol Cell. 7. 409-418 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Hirose, F., M.Yamaguchi, K.Kuroda, A.Omori, T.Hachiya, M.Ikeda, Y.Nishimoto and A.Matsukage: "Isolation and characterization of cDNA for DREF, a promoter-activating factor for Drosophila DNA replication-related genes."J Biol Chem. 271. 3930-3937 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Obuse, C., Y.Okuno, T.Okazaki and H.Masukata: "A replication-enhancing element with transcriptional silencer activity in autonomously replicating human chromosomal fragments."Mol Biol Cell. 7. 43-55 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Murakami, Y., J.A.Huberman and J.Hurwitz: "Identification, purification, and molecular cloning of autonomously replicating sequence-binding protein 1 from fission yeast Schizosaccharomyces pombe."Proc Natl Acad Sci USA. 93. 502-507 (1996)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2002-03-26  

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