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2001 Fiscal Year Final Research Report Summary

Molecular Basis for RNA Dynamic Function

Research Project

Project/Area Number 09278101
Research Category

Grant-in-Aid for Scientific Research on Priority Areas (A)

Allocation TypeSingle-year Grants
Research InstitutionThe University of Tokyo

Principal Investigator

WATANABE Kimitsuna  University of Tokyo, Graduate School of Frontier Sciences, Professor, 大学院・新領域創成科学研究科, 教授 (00134502)

Co-Investigator(Kenkyū-buntansha) OHTA Shigeo  Nippon Medical School, Institute of Gerontology, Professor, 老人病研究所, 教授 (00125832)
INOUE Tan  Kyoto University, Graduate School of Science, Professor, 大学院・理学研究科, 教授 (40114855)
NAKAMURA Yoshikazu  University of Tokyo, The Institute of Medica Scie, Professor, 医科学研究所, 教授 (40114590)
SHIMURA Yoshiro  Biomolecular Engineering Research Institute, Director Researcher, 生物分子工学研究所, 所長
SHIMAMOTO Nobuo  Natural Institute of Genetics, Professor, 構造研究部門, 教授 (20127658)
Project Period (FY) 1997 – 2000
KeywordsRNA Catalytic Function / RNA Information Function / RNA High-level Function / Rybozyme / Translation Factors / Aplicing / Mitochondria / tRNA
Research Abstract

The aim of this research project is to establish the molecular basis of RNA dynamic functions in the phenomena of life by systematizing the RNA dynamic functions through revealing the molecular mechanisms of catalytic functions of RNA and high-level control functions of information expression, and searching and artificially producing ribozymes catalyzing new reaetions. On the basis of the results obtained by these researches, molecular mechanisms of high-level phenomena of life such as development, differentiation and disease will be pursued and many unknown RNA functions will be elucidated. In parallel with these achievements new methods for analyzing RNA dynamic functions will be developed. For this purpose three research groups and one special team were organized under a master group. The first, 「RNA dynamic functions」 group succeeded in determination of a minimal functional region of group I intron possessing the splicing function, construction of dimeric hammerhead ribozyme (maxiz … More yme) providing both sequence recognition and RNA scission activities, and expression of the complex of the maxizyme with a helicase in cells. The second, 「RNA information fuctions」group obtained a highly appreciated result of discovery of tRNA molecular mimicry by translation factors」 which leads to elucidating the basic principle of the translation reaction. In research for RNA recognition mechanisms by proteins, NMR analysis of a complex of sxl protein with a single-stranded RNA and X-ray analysis of a complex of aminoacyl-tRNA synthetase with tRNA succeeded in elucidating molecular recognition mechanisms of RNA by proteins. The third, 「RNA high-level functions」 succeeded in constructing a mitochondrial gene-introduced mouse useful for elucidating the cause of disease and mechanism of senescence. It was found that mitochondrial diseases are caused by lacking in the taurine-modification at the anticodon first position of mitochondrial tRNAs. The elucidation of functional structures of tmRNA was also successful. The research project has been progressing well and it is estimated that about 75% of the original aims have been achieved. During progress in the research project Japan RNA Society, a supporting system for supporting the RNA research in Japan was established on the basis of the project. Less

  • Research Products

    (15 results)

All Other

All Publications (15 results)

  • [Publications] Suzuki, T., Watanabe.K et al: "Structural Compensation for the Deficist of rRNA with proteins in the Mammalian into chndinal Ribosome"J.Biol.Chem.. 276. 21724-21736 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ito, K., Uno.M, Nakamura, Y: "A tripeptide 'anticodon' deciphens stop codons in message RoSA"Nature. 403. 680-684 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ikawa, Y, Inoue, T.et al: "Minimal Catalyfic domain of a group I self aplicing intron RNA"Nature Str.Biol.. 7. 1032-1035 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nakano, K., Ohta, S et al: "Alzheiner's disease and DLST genotype"The Lancet. 350. 1367-1368 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Harada, Y., Shimamoto N.et al: "Direct observation of DNA refation during tiarscoption by Escherichia Coli RNA polymerace"Nature. 409. 113-115 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nakada, K., Hayashi, J, et al: "Inter-mitochondrial complementation:mitochondria specific system preventing mice from…"Nature Med.. 7. 934-939 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 渡辺, 中村, 井上他: "志村、渡辺共編「RNA研究の最前線」"シュプリングフェアラーク東京. 238 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Suzuki, T., Watanabe, K. et al.: "Structural Compensation for the deficit of rRNA with Proteins in the mammalian mitochondrial ribosome."J. Biol. Chem.. 276. 21724-21736 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ito, K., Uno, M. and Nakamura, Y.: "A tripeptide 'anticodon' deciphers stop codons in messenger RNA"Nature. 403. 680-684 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ikawa, Y., Inoue, T. et al.: "Minimal catalytic domain of a group I self-splicing intron RNA"Nature Str. Biol.. 7. 1032-1035 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nakano, K., Ohta, S.: "Alzheimer's disease and DLST genotype"The lancet. 350. 1367-1368 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Harada, Y., Shimamoto, N. et al.: "Direct observation of DNA rotation during transcription by Escherichia coli RNA polymerase"Nature. 409. 113-115 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nakada, K., Hayashi, J. et al.: "Inter-mitochondrial Complementation : mitochondria-specific sysytem preventing mice from expression of disease phenotypes by mutant mtDNA"Nature Med.. 7. 934-939 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Handa, N., Yokoyama, S. et al.: "Structural basis for Recognition of the tra mRNA precursor by the Sex-lethal protein"Nature. 398. 579-585 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ogawa, T., Watanabe, K., Masaki, H. et al.: "A cytotoxic ribonuclease targeting specific transfer RNA anticodons"Science. 283. 2097-2100 (1998)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2003-09-17  

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