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1999 Fiscal Year Final Research Report Summary

Construction of a new improvement system using DNA molecular technique in the forest tree species

Research Project

Project/Area Number 09556032
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section展開研究
Research Field 林学
Research InstitutionKYUSHU UNIVERSITY

Principal Investigator

SHIRAISHI Susumu  Faculty of Agriculture, KYUSHU UNIVERSITY Professor, 大学院・農学研究院, 教授 (70226314)

Co-Investigator(Kenkyū-buntansha) KURINOBU Susumu  Forest Tree Breeding Center, Kyushu Regional Breeding Office, Head of Research Division, 九州育種場, 研究員
TACHIKAWA Hiroshi  Nippon Paper Industries Co., Ltd., Research Laboratory of Chemical Development, Researcher, 化成品開発研究所, 研究員
SHIBATA Masaru  Oji Paper Co., Ltd., Forestry Research Institute, Director, 森林資源研究所, 研究員
MATSUMURA Junji  Faculty of Agriculture, KYUSHU UNIVERSITY Assistant Professor, 大学院・農学研究院, 助手 (70243946)
TAKATA Katsuhiko  Faculty of Agriculture, KYUSHU UNIVERSITY Assistant Professor, 大学院・農学研究院, 助手 (50264099)
ODA Kazuyuki  Faculty of Agriculture, KYUSHU UNIVERSITY Professor, 大学院・農学研究院, 教授 (10045130)
Project Period (FY) 1997 – 1999
KeywordsDNA molecular marker / breeding system / cultivar diagnosis / clone analysis / parentage diagnosis / MuPS analysis / chloroplast DNA marker / SCAR
Research Abstract

For constructing an effective improvement system of forest tree species using DNA molecular technique, we developed a new DNA molecular marker and tried to apply the actual breeding.
(1) A new DNA molecular marker for identification of cultivars/clones : In Acacia mangium and Cryptomeria japonica (Sugi), more than 18 SCAR (sequence characterized amplified regions) markers were designed from RAPD (random amplified polymorphic DNA) fragments in each species. By combining these SCAR markers, a MuPS (multiplex-PCR of SCAR markers) system was constructed using Multiplex-PCR.This system possesses the discrimination power to identify ca. 260,000 genotypes.
(2) Survey of the intra-specific chloroplast DNA polymorphism in Pinus thunbergii : BESS (base excision sequence scanning), CFLP (cleavase fragment length polymorphism), and SSR (simple sequence repeats) analysis of the chloroplast DNA revealed the eight mutations in the intergenic spacer regions. These chloroplast DNA markers were useful for ascent the pollen parent of progenies.
(3) Application MuPS system into the classification of Sugi cultivars and plus tree clones : We determined the MuPS types of 77 cultivars and 589 plus tree clone of Kyushu and constructed the data base of their MuPS types. As the result of MuPS analysis, quite a few plus tree clones originated from some cultivars or some unknown cutting clones. These duplicated clones should be eliminated from the plus trees population of Kyushu region.

  • Research Products

    (26 results)

All Other

All Publications (26 results)

  • [Publications] 宮原文彦: "マツノザイセンチュウ抵抗性クロマツ採種園構成クローンとしての小浜ク-24号の評価"日本林学会誌. 80. 233-235 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 白石 進: "林木のDNA分析法(8)--核DNA分析の応用と発展(1)林木育種への貢献-"林木の育種. 193. 37-41 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 久枝和彦: "DNA分子マーカーを用いた簡便なスギ品種の分類・同定法の開発-RAPD-SCARマーカーのマルチローカス分析-"日本林学会九州支部研究論文集. 52. 49-50 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Widyatomoko,A.: "アカシア4種の葉緑体DNA遺伝子間スペーサー領域のシークエンス変異"日本林学会九州支部研究論文集. 52. 51-52 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 林 誠一: "スギの高密度連鎖地図の作成に向けた基礎的研究"日本林学会九州支部研究論文集. 52. 55-56 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 清藤城宏: "山梨県ヒノキ採種園における鰍沢5号の花粉親としての寄与"日本林学会誌. 82. 105-108 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 清藤城宏: "葉緑体DNAマーカーを用いたヒノキにおける選択受精の検討"日本林学会誌. 82. 380-383 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 久枝和彦: "MuPS(Multiplex-PCR of SCAR markers)分析を用いた九州産スギ精英樹の織別 -佐賀・長崎県産スギ精英樹について-"日本林学会九州支部研究論文集. 53. 55-56 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Seido,K.: "Pollen dispersal in Hinoki(Chamaecyparis obtusa)seed orchard detected using a chroloplast DNA marker"J.For.Res.. 6. 7-12 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Seido,K.: "Determination of the Selfing Rate in Hinoki(Chamaecyparis obtusa)Seed Orchard by Using a Chloroplast PCR-SSCP Marker"Silvae Genetica. (印刷中). (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Shiraishi,S.: "Incomplete paternal inheritance of chloroplast DNA recognized in Chamaecyparis obtusa using an intraspecific polymorphism of the trnD-trnY intergenic spacer region"Theor.Appl.Genet.. (印刷中). (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 白石 進(共著): "集約林業最前線"フォレスト・リサーチ研究所. 246 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 白石 進(共著): "クローン林業はこうしてつくろう"フォレスト・リサーチ研究所. 394 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Miyahara, F., Maeda, H., Shiraishi, S.: "Contribution of Obama (t)-24 clone to the seed product in the seed orchard of resistance Japanese black pine (Pinus thunbergii) clones against pine wood nematode."J.Jpn.For.Soc.. 80. 233-235 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Shiraishi, S.: "DNA analysis (8) of forest tree species. -Application of nuclear DNA into forest tree improvement-"Forest Tree Breeding. 193. 37-41 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Hisaeda, K., Shiraishi, S.: "Basic study for a simple identification of Sugi (Cryptomeria japonica D.Don) cultivars using DNA molecular markers."Bull.Kyushu Branch Jpn.For.Soc.. 52. 49-50 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Widyatomoko, A., Shiraishi, S.: "Sequence polymorphism in intergenic spacer region of chloroplast DNA in 4 Acacia species."Bull.Kyushu Branch Jpn.For.Soc.. 52. 51-52 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Hayashi, S., Maeda, H., Shiraishi, S.: "A basic study on high density map on Cryptomeria japonica D.Don."Bull.Kyushu Branch Jpn.For.Soc.. 52. 55-56 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Seido, K., Maeda, H., Murakami, H., Ida, K., Shiraishi, S.: "Contribution of clones as the pollen parent in a hinoki (Chamaecyparis obtusa) seed orchard estimated using a chloroplast DNA marker, Kajikazawa 5."J.Jpn.For.Soc.. 82. 105-108 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Seido, K., Yamagishi, K., Ida, K., Murakami, H., Shiraishi, S.: "Investigation of selective fertilization in hinoki (Chamaecyparis obtusa) using a chloroplast DNA marker."J.Jpn.For.Soc.. 82. 380-383 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Hisaeda, K., Shiraishi, S.: "Discrimination of Sugi (Cryptomeria japonica D.Don) plus tree clones in Saga and Nagasaki prefectures using MuPS (Multiplex-PCR of SCAR markers)"Bull.Kyushu Branch Jpn.For.Soc.. 53. 55-56 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Seido, K., Maeda, H., Shiraishi, S.: "Pollen dispersal in Hinoki (Chamaecyparis obtusa) seed orchard detected using a chroloplast DNA marker."J.For.Res.. 6. 7-12 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Seido, K., Maeda, H., Shiraishi, S.: "Determination of the Selfing Rate in Hinoki(Chamaecyparis obtusa) Seed Orchard by Using a Chloroplast PCR-SSCP Marker."Silvae Genetica. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Shiraishi, S., Maeda, H., Toda, T., Seido, K., Sasaki, Y.: "Incomplete paternal inheritance of chloroplast DNA recognized in Chamaecyparis obtusa using an intraspecific polymorphism of the trnD-trnY intergenic spacer region."Theor.Appl.Genet.. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Shiraishi, S.: "Advanced Forest Technology"Forest Research Institute, Kyoto. 246 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Shiraishi, S.: "Management of clonal forest"Forest Research Institute, Kyoto. 394 (2000)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2002-03-26  

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