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1998 Fiscal Year Final Research Report Summary

Generation Mechanism of Human Chemokine Gene Family

Research Project

Project/Area Number 09670135
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field General medical chemistry
Research InstitutionKUMAMOTO UNIVERSITY

Principal Investigator

NOMIYAMA Hisayuki  KUMAMOTO UNIVERSITY,SCHOOL OF MEDICINE,ASSISTANT PROFESSOR, 医学部, 講師 (00156225)

Co-Investigator(Kenkyū-buntansha) MIURA Retsu  KUMAMOTO UNIVERSITY,SCHOOL OF MEDICINE,PROFESSOR, 医学部, 教授 (70093466)
TANASE Sumio  KUMAMOTO UNIVERSITY,SCHOOL OF MEDICINE,ASSISTANT PROFESSOR, 医学部, 助教授 (20112401)
Project Period (FY) 1997 – 1998
KeywordsChemokine / LARC / SLC / ELC / PARC / fractalkine / DNA duplication / chromosome 17 / EST
Research Abstract

Chemokine family is a group of cytokines involved in inflammation, virus infection and cell growth. There are now well over 40 chemokines including those cloned by our group. We found several ESTs encoding novel chemokines in the EST database and cloned the cDNAs encoding CC chemokines termed LARC (liver and activation-regulated chemokine), SLC (secondary lymphoid tissue chemokine), ELC (EBI 1-ligand chemokine), PARC (pulmonary and activation-regulated chemokine), LEC (liver-expressed chemokine) and CX3C chemokine fractalkine. We determined their gene loci. From these results, it is apparent that the genes for the CC chemokines which mainly attract monocytes cluster on Chr 17, whereas the genes for the CC chemokines which are mainly chemotactic for lymphocytes reside on the other chromosomes. We also characterized the PARC gene in the Chr 17 chemokine cluster, and found that the gene had been generated by fusion of two MIP-1alpha-like sequences. In addition, there is no mouse counterpart of the human PARC gene. This indicates that the PARC gene was generated after humans and rodents had diverged. These results suggest that CC chemokine genes were generated on Chr 17 by successive duplication events of the region containing the MIP-lalpha gene. Hence, the CC chemokines located on other than Chr 17 had emerged before most of the CC chemokines on Chr 17 were generated, and the genes recently generated by duplication such as the PARC gene are located in the large chemokine cluster on Chr 17.

  • Research Products

    (38 results)

All Other

All Publications (38 results)

  • [Publications] H. Nomiyama et al.: "The human CC chemokine TECK(SCYA25)maps to chromosome 19p13.2" Genomics. 51(2). 311-312 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H. Nomiyama et al.: "Human chemokines fractalkine(SCYD1), MDC(SCYA22) and TARC(SCYA17) are clustered on chromosome 16q13" Cytogenet. Cell. Genet.81(1). 10-11 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] R. Yoshida et al.: "EBI-ligand chemokine(ELC)attracts a broad spectrum of lymphocytes: Activated T cells strongly upregulate CCR7 and efficiently migrate toward ELC" Int. Immunol.10(7). 901-910 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] M. Nagira et al.: "A lymphocyte-specific CC chemokine, secondary lymphoid tissue chemokine(SLC), is a highly efficient chemoattractant for B cells and activated T cells" Eur. J. Immunol.28(5). 1516-1523 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H. Nomiyama et al.: "Assignment of the human CC chemokine MPIF-2/eotaxin-2(SCYA24)to chromosome 7q11.23" Genomics. 49(2). 339-340 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K. Shoudai et al.: "Isolation of cDNA encoding a novel human CC chemokine NCC-4/LEC" Biochim. Biophys. Acta. 1396(3). 273-277 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] T. Imai et al.: "Identification and molecular characterization of fractalkine receptor CX3CR1, which mediates both leukocyte migration and adhesion" Cell. 91(4). 521-530 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H. Nomiyama et al.: "Assignment of the human CC chemokine gene TARC(SCYA17)to chromosome 16q13" Genomics. 40(1). 211-213 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K. Hieshima et al.: "Molecular cloning of a novel human CC chemokine PARC which is most homologous to MIP-1α/LD78α but chemotactic only for lymphocytes" J. Immunol.159(3). 1140-1149 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] M. Nagira et al.: "Molecular cloning of a novel human CC chemokine Secondary Lymphoid-tissue Chemokine that is a potent chemoattractant for lymphocytes and mapped to chromosome 9p13" J. Biol. Chem.272(31). 19518-19524 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] M. Baba et al.: "Identification of CCR6, the specific receptor for a novel lymphocyte-directed CC chemokine LARC" J. Biol. Chem.272(23). 14893-14898 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] R. Yoshida et al.: "Molecular cloning of a novel human CC chemokine EBI1-ligand chemokine that is a specific functional ligand for EBI1, CCR7" J. Biol. Chem.272(21). 13803-13809 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] T, Kukita et al.: "Macrophage inflammatory protein-1α(LD78α)expressed in human bone marrow:its role in regulation of hematopoiesis and osteoclast recruitment" Lab. Invest.76(3). 399-406 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K. Ishizuka et al.: "Expression and distribution of CC chemokine macrophage inflammatory protein-1α/LD78 in the human brain" NeuroReport. 8(5). 1215-1218 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] E. Van Coillie et al.: "Human monocyte chemotactic protein-2(MCP-2):cDNA cloning and regulated expression of mRNA in mesenchymal cells" Biochem. Biophys. Res. Commn.231(3). 726-730 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K. Hieshima et al.: "Molecular cloning of a novel human CC chemokine Liver and Activation-regulated Chemokine(LARC)expressed in liver:chemotactic activity for lymphocytes and gene localization on chromosome 2" J. Biol. Chem.272(9). 5846-5853 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K. Murakami et al.: "Structural and functional analysis of the promoter region of the human MCP-3 gene: transactivation of expression by novel recognition sequences adjacent to the transcription initiation site" DNA Cell Biol.16(2). 173-183 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] E. Van Coillie et al.: "The human MCP-2 gene(SCYA8):cloning, sequence analysis, tissue-expression and assignment to the C-C chemokine gene contig on chromosome 17q11.2" Genomics. 40(2). 323-331 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] O. Yoshie et al.: "Novel lymphocytes-specific CC chemokines and their receptors" J. Leukc. Biol. 62(5). 634-644 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nomiyama, H., Amano, K., Kusuda, J., Imai, T., Miura, R., Yoshie, O.and Matsuda, Y.: "The human CC chemokine TECK (SCYA25) maps to chromosome 19p13.2" Genomics. 51 (2). 311-312 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nomiyama, H., Imai, T., Kusuda, T., Miura, R., Callen, D.F.and Yoshie, O.: "Human chemokines fractalkine (SCYA22) and TARC (SCYA17) are clustered on chromosome 16q13" Cytogenet.Cell Genet.81 (1). 10-11 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Yoshida, R., Nagira, M., Imai, T., Baba, M., Takagi, S., Tabira, Y., Akagi, J., Nomiyama, H., and Yoshie, O.: "EBII-ligand chemokine (ELC) attracts a broad spectrum of lymphocytes : Activated T cells strongly upregulate CCR7 and efficiently migrate toward ELC" Int.Immunol.10 (7). 901-910 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nagira, M., Imai, T., Yoshida, R., Takagi, S., Iwasaki, M., Baba, M., Tabira, Y., Akagi, J., Nomiyama, H., and Yoshie, O.: "A lymphocyte-specific CC chemokine, secondary lymphoid tissue chemokine (SLC), is a highly efficient chemoattractant for B cells and activated T cells" Eur.J.Immunol.28 (5). 1516-1523 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nomiyama, H., Osborne, L.R., Imai, T., Kusuda, J., Miura, R., Tsui, L.-C.and Yoshie, O.: "Assignment of the human CC chemokine MPIF-2/eotaxin-2 (SCYA24) to chromosome 7q11.23" Genomics. 49 (2). 339-340 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Shoudai, K., Hieshima, K., Fukuda, S., Iio, M., Miura, R., Imai, T., Yoshie, O.and Nomiyama, H.: "Isolation of cDNA encoding a novel human CC chemokine NCC-4/LEC" Biochim.Biophys.Acta.1396 (3). 273-277 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Imai, T., Hieshima, K., Haskell, C., Baba, M., Nagira, M., Nishimura, M., Kakizaki, M., Takagi, S., Nomiyama, H., Shall, T.J.and Yoshie, O.: "Identification and molecular characterization of fractalkine receptor CX3CR1, which mediates both leukocyte migration and adhesion" Cell. 91 (4). 521-530 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nomiyama, H., Imai, T., Kusuda, J., Miura, R., Callen, D.F.and Yoshie, O.: "Assignment of the human CC chemokine gene TARC (SCYA17) to chromosome 16q13" Genomics. 40 (1). 211-213 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Hieshima, K., Imai, T., Shoudai, K., Ishizuka, K., Nakagawa, T., Takeya, M., Sakaki, Y., Takatsuki, K., Miura, R., Opdenakker, G., Van Damme, J., Yoshie, O.and Nomiyama, H.: "Molecular cloning of a novel human CC chemokine PARC which is most homologous to MIP-1alpha/LD78alpha but chemotactic only for lymphocytes" J.Immunol.159 (3). 1140-1149 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nagira, M., Imai, T., Hieshima, K., Kusuda, J., Ridanpaa, M., Takagi, S., Nishimura, M., Kakizaki, M., Nomiyama, H.and Yoshie, O.: "Molecular cloning of a novel human CC chemokine Secondary Lymphoid-tissue Chemokine that is a potent chemoattractant for lymphocytes and mapped to chromosome 9P13" J.Biol.Chem.272 (31). 19518-19524 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Baba, M., Imai, T., Nishimura, M., Kakizaki, M., Takagi, S., Hieshima, K., Nomiyama, H.and Yoshie, O.: "Identification of CCR6, the specific receptor for a novel lymphocyte-directed CC chemokine LARC" J.Biol.Chem.272 (23). 14893-14898 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Yoshida, R., Imai, T., Hieshima, K., Kusuda, J., Baba, M., Kitaura, M., Nishimura, M., Kakizaki, M., Nomiyama, H.and Yoshie, O.: "Molecular cloning of a novel human CC chemokine EBI1-ligand chemokine that is a specific functional ligand for EBI1, CCR7" J.Biol.Chem.272 (21). 13803-13809 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kukita, T., Nomiyama, H., Ohmoto, Y., Shuto, T., Hotokebuchi, T., Sugioka, Y., Miura, R.and Iijima, T.: "Macrophage inflammatory protein-1alpha (LD78alpha) expressed in human bone marrow : Its role in regulation of hematopoiesis and osteoclast recruitment" Lab.Invest.76 (3). 399-406 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ishizuka, K., Igata-Yi, R., Kimura, T., Hieshima, K., Kukita, T., Kin, Y., Misumi, Y., Yamamoto, M., Nomiyama, H., Miura, R., Takamatsu, J., Katsuragi, S.and Miyakawa, T.: "Expression and distribution of CC chemokine macrophage inflammatory protein-1alpha./LD78 in the human brain" NeuroReport. 8 (5). 1215-1218 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Van Coillie, E., Froyen, G., Nomiyama, H., Miura, R., Fiten, P., J.-P.Lenaerts, Van Damme, J.and Opdenakker, G.: "Human monocyte chemotactic protein-2 (MCP-29) : cDNA cloning and regulated expression of mRNA in mesenchymal cells" Biochem.Biophys.Res.Commn.231 (3). 726-730 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Hieshima, K., Imai, T., Opdenakker, G., Van Damme, J., Kusuda, J., Tei, H., Sakai, Y., Takatsuki, K., Miura, R., Yoshie, O.and Nomiyama, H.: "Molecular cloning of a novel human CC chemokine Liver and Activation-regulated Chemokine (LARC) expressed in liver : chemotactic activity for lymphocytes and gene localization on chromosome 2" J.Biol.Chem.272 (9). 5846-5853 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Murakami, K., Nomiyama, H., Miura R., Follens, A., Fiten, P., Van Coillie, E., Van Damme, J.and Opdenakker, G.: "Structural and functional analysis of the promoter region of the human MCP-3 gene : transactivation of expression by novel recognition sequences adjacent to the transcription initiation site" DNA Cell Biol.16 (2). 173-183 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Van Coillie, E., Fiten, P., Nomiyama, H., Sakaki, Y., Miura, R., Yoshie, O., Van Damme, J.and Opdenakker, G.: "The human MCP-2 gene (SCYA8) : cloning, sequence analysis, tissue-expression and assignment to the C-C chemokine gene contig on chromosome 17q11.2" Genomics. 40 (2). 323-331 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Yoshie, O., Imai, T.and Nomiyama, H.: "Novel lymphocytes-specific CC chemokines and their receptors" J.Leukc.Biol.62 (5). 634-644 (1997)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 1999-12-08  

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