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2005 Fiscal Year Final Research Report Summary

Microbiological environmental assessment in Southeast Asia

Research Project

Project/Area Number 15201006
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Environmental impact assessment/Environmental policy
Research InstitutionOsaka University

Principal Investigator

NASU Masao  Osaka University, School of Pharmaceutical Sciences, Professor, 薬学研究科, 教授 (90218040)

Co-Investigator(Kenkyū-buntansha) KAWABATA Zen'ichiro  Osaka University, Research Institute for Humanity and Nature, Professor, 総合地球環境学研究所, 教授 (80108456)
SUZUKI Satoru  Ehime University, Center for Marine Environmental Studies, Professor, 沿岸環境科学研究センター, 教授 (90196816)
TANI Katsuji  Osaka University, Graduate School of Pharmaceutical Sciences, Lecturer, 薬学研究科, 講師 (50217113)
YAMAGUCHI Nobuyasu  Osaka University, Graduate School of Pharmaceutical Sciences, Assistant Professor, 薬学研究科, 助手 (20252702)
Project Period (FY) 2003 – 2005
KeywordsSoutheast Asia / Aquatic environment / Microbes / Environmental evaluation / New methods / tet genes / Gene transfer / Algae
Research Abstract

Objective of this research project is to assure microbiological quality of fresh water in order to keep safety of aquatic environment in Southeast Asia.
Research results in FY2005
1.DNA microarray with newly designed probes was created. It consists of the oligonucleotide probes which corresponds to the 16S rRNA of bacteria. This DNA microarray provided us to obtain a convenient approach to detect various species of bacteria in aquatic environment simultaneously.
2.According to the research, bacterial physiological states can be estimated by fluorescence in situ hybridization with vital staining and quantification of mRNA of gyrB gene.
3.The frequencies of occurrence of tetracycline-resistant bacteria were higher in samples obtained at the sites in Kracheh (Cambodia) and Can Tho (Viet Nam) along the Mekong River than the sites in the lake Tonle Sape (Cambodia) and the Ho Chi Minh estuarine (Viet Nam). Various tetracycline genes were found in sediment of the Mekong River.
4.The extracellular metabolic products by Microcystis aeruginosa enhanced conjugal transfer of plasmid.

  • Research Products

    (8 results)

All 2006 2005

All Journal Article (8 results)

  • [Journal Article] Detection of food poisoning bacteria in fresh vegetable using DNA microarray2006

    • Author(s)
      Ikeda, M. et al.
    • Journal Title

      Journal of Health Science 52

      Pages: 36-42

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Simultaneous enumeration of viable Enterobacteriaceae and Pseudomonas spp. within three hours by multicolor fluorescence in situ hybridization with vital staining2006

    • Author(s)
      Kitaguchi A. et al.
    • Journal Title

      Journal of Microbiological Methods (in press)

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] A combination of direct viable counting, fluorescence in situ hybridization and green fluorescent protein gene expression for estimating plasmid transfer at the single level2006

    • Author(s)
      Jorquera, M. et al.
    • Journal Title

      Microbes and Environments (in press)

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Detection of food poisoning bacteria in fresh vegetable using DNA microarray2006

    • Author(s)
      Ikeda, M. et al.
    • Journal Title

      J.Health Sci. 52

      Pages: 36-42

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Simultaneous enumeration of viable Enterobacteriaceae and Pseudomonas spp.within three hours by multicolor fluorescence in situ hybridization with vital staining2006

    • Author(s)
      Kitaguchi, A. et al.
    • Journal Title

      J.Microbial.Methods (in press)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] A combination of direct viable counting, fluorescence in situ Hybridization, and green fluorescent protein gene expression for estimating plasmid transfer at the single level2006

    • Author(s)
      Jorquera, M. et al.
    • Journal Title

      Microb.Environ. (in press)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Development of phylogenetic oligonucleotide probes for screening foodborne bacteria2005

    • Author(s)
      Ikeda, M. et al.
    • Journal Title

      Journal of Health Science 51

      Pages: 469-476

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Development of phylogenetic oligonucleotide probes for screening foodborne bacteria2005

    • Author(s)
      Ikeda, M. et al.
    • Journal Title

      J.Health Sci. 51

      Pages: 469-476

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2007-12-13  

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