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2005 Fiscal Year Final Research Report Summary

Ecological genetic studies on in-situ conservation of plant genetic resources in disturbed habitats

Research Project

Project/Area Number 15310161
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Resource conservation science
Research InstitutionOsaka Prefecture University

Principal Investigator

YAMAGUCHI Hirofumi  Osaka Prefecture University, Graduate School of Life and Environmental Sciences, Professor, 生命環境科学研究科, 教授 (20112542)

Co-Investigator(Kenkyū-buntansha) ABE Jun  Hokkaido University, Graduate School of Agriculture, Associate Professor, 農学研究科, 助教授 (00192998)
UMEMOTO Shinya  Kyoto University, Field Science Education and Research Center, Associate Professor, フィールド科学教育研究センター, 助教授 (60213500)
NAKAYAMA Yuichiro  Osaka Prefecture University, Graduate School of Life and Environmental Sciences, Assistant, 生命環境科学研究科, 助手 (50322368)
SOEJIMA Akiko  Osaka Prefecture University, Faculty of Science, Assistant, 理学系研究科, 助手 (00244674)
YAMANE Kyoko  Osaka Prefecture University, Graduate School of Life and Environmental Sciences, Assistant, 生命環境科学研究科, 助手 (00405359)
Project Period (FY) 2003 – 2005
Keywordswild genetic resources / cultivated plants / gene-flow / ecological genetics / SNP
Research Abstract

In order to obtain the fundamental knowledge on in-situ conservation of plant genetic resources, field scientific approach, molecular phylogenetic approach and population biological approach were applied for describing the genetic and biological diversity of plants grown under disturbance. In East Asiatic plant species, we confirmed the association of dwarf type weedy oats in Yu-mai (naked oats) field in Yunnan, China, habitat segregation of Ceratotropis species (large or small population construction habit), adaptation to annual from perennial in a particular habitat in Echinochloa species, on-situ conservation of vulnerable species in traditional home garden, semi-cultivation of wild water pepper by expedition-base-survey on habitats of the wild relatives of cultivated plants. We developed SSR and SNP markers which are useful for ecological genetic study on ruderals. In phylogenetic studies, we determined geographical distribution of chloroplast DNA SNPs in Lilium, relationship of intertaxa of Symplocos, Aster ageratoides complex, Vitaceae species, Raphanus, Triticum-Aegilops complex, Cicer and diversity of SSR and ITS in Glycine and Echinochloa. In population dynamic studies, we characterize genetic diversity of natural populations under disturbance in wild azuki, wild soybean, Imperata, and composite species. We evaluated character state on each trees and/or geographical distribution and concluded that evolution of the traits unique to disturbed environment is fast with interaction between cultivated plant and its wild counterparts. In in-situ conservation of wild genetic resources, it is very important to gather the information on the genetic diversity created in prehistoric time, recent adaptation to habitat and maintenance mechanism of population

  • Research Products

    (22 results)

All 2006 2005 2004 2003

All Journal Article (20 results) Book (2 results)

  • [Journal Article] Effect of unprotected cultivation of GMO crops on natural ecosystem (in Japanese)2006

    • Author(s)
      H.Yamaguchi
    • Journal Title

      Series in Agriculture in 21 Century : In, Researches on GMO Crop (ed by Japan Agronomical Science Society)(Yokendo, Tokyo)

      Pages: 63-85

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] A molecular phylogeny of wild and cultivated Echinochloa in East Asia inferred from non-coding region sequences of trnT-L-F.2005

    • Author(s)
      H.Yamaguchi
    • Journal Title

      Weed Biology and Management 5・4

      Pages: 210-218

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Genetic diversity of vegetable water pepper (Persicaria hydropiper (L.) Spach as revealed by RAPD markers2005

    • Author(s)
      K.Yasuda
    • Journal Title

      Breeding Science 55・1

      Pages: 7-14

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Molecular analysis and physicochemical properties of electrophoretic variants of wild soybean Glycine soja storage protein2005

    • Author(s)
      Fukuda, T.
    • Journal Title

      J.Agri.Food Chem. 53

      Pages: 3685-3665

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Chloroplast DNA variations of cultivated radish and its wild relatives2005

    • Author(s)
      K.Yamane
    • Journal Title

      Plant Science 168

      Pages: 627-634

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Intra- and interspecific phylogenetic relationships among diploid Triticum-Aegilops species based on base pair substitutions, indels -and microsatellites in chloroplast non-coding sequences.2005

    • Author(s)
      K.Yamane
    • Journal Title

      Amer.Jour.Bot. 92

      Pages: 1887-1898

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Cytogeography of the Aster ageratoides complex in Korea.2005

    • Author(s)
      Soejima, A.
    • Journal Title

      Acta Phytotax.Geobot. 56

      Pages: 97-104

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] A molecular phylogeny of wild and cultivated Echinochloa in East Asia inferred from non-coding region sequences of trnT-L-F.2005

    • Author(s)
      H.Yamaguchi, A.Utano, K.Yasuda, A.Yano, A.Soejima
    • Journal Title

      Weed Biology and Management 5(4)

      Pages: 210-218

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Genetic diversity of vegetable water pepper (Persicaria hydropiper (L.) Spach. as revealed by RAPD markers.2005

    • Author(s)
      K.Yasuda, H.Yamaguchi
    • Journal Title

      Breeding Science 55(1)

      Pages: 7-14

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Cytogeography of the Aster ageratoides complex in Korea.2005

    • Author(s)
      A.Soejima, J.-H.Pak, T.Morita, M.Ito
    • Journal Title

      Acta Phytotax.Geobot. 56

      Pages: 97-104

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Chloroplast DNA variations of cultivated radish and its wild relatives..2005

    • Author(s)
      K.Yamane, Na Lu, O.Ohnishi
    • Journal Title

      Plant Science 168

      Pages: 627-634

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] A test for molecular identification of Japanese archaeological beans and phylogenetic relationship of wild and cultivated species of subgenus Ceratotropis (genus Vigna, Papilionaceae) using sequence variation in two non-coding regions of the trnL and trnF genes.2004

    • Author(s)
      Yano, A.
    • Journal Title

      Econ.Bot. 58,Suppl.

      Pages: 135-146

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Interspecific relationships of the genus Cicer L. (Fabaceae) based on trnT-F sequences.2004

    • Author(s)
      Javadi, F.
    • Journal Title

      Theor.Appl.Genet. 109・2

      Pages: 317-322

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Marker-assisted analysis for soybean hard seededness with isozyme and simple sequence repeat loci.2004

    • Author(s)
      Sakamoto, S.
    • Journal Title

      Breeding Science 54

      Pages: 133-139

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] A test for molecular identification of Japanese archaeological beans and phylogenetic relationship of wild and cultivated species of subgenus Ceratotropis (genus Vigna, Papilionaceae) using sequence variation in two non-coding regions of the trnL and trnF genes.2004

    • Author(s)
      A.Yano, K.Yasuda, H.Yamaguchi
    • Journal Title

      Econ.Bot. 58(Suppl.)

      Pages: 135-146

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Interspecific relationships of the genus Cicer L. (Fabaceae) based on trnT-F sequences.2004

    • Author(s)
      F.Javadi, H.Yamaguchi
    • Journal Title

      Theor.Appl.Genet. 109(2)

      Pages: 317-322

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Marker-assisted analysis for soybean hard seededness with isozyme and simple sequence repeat loci.2004

    • Author(s)
      S.Sakamoto, J.Abe, A.Kanazawa, Y.Shimamoto
    • Journal Title

      Breeding Science 54

      Pages: 133-139

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Soybean germplasm pools in Asia revealed by nuclear SSRs2003

    • Author(s)
      Abe, J.
    • Journal Title

      Theor.Appl.Genet. 106

      Pages: 445-453

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Soybean germplasm pools in Asia revealed by nuclear SSRs.2003

    • Author(s)
      J.Abe, D.H.Xu, Y.Suzuki, A.Kanazawa, Y.Shimamoto
    • Journal Title

      Theor.Appl.Genet. 106

      Pages: 445-445

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Geographical distribution of chloroplast DNA variation in Imperata cylindrica in Japan (in Japanese)2003

    • Author(s)
      K.Yasuda, H.Shibayama
    • Journal Title

      Coastal Bioenvironment 2

      Pages: 51-58

    • Description
      「研究成果報告書概要(欧文)」より
  • [Book] シリーズ21世紀の農学「遺伝子組換え作物の研究」2006

    • Author(s)
      山口裕文
    • Total Pages
      63-85
    • Publisher
      日本農学会, 養賢堂
    • Description
      「研究成果報告書概要(和文)」より
  • [Book] 照葉樹林文化のつくる里山の景観 森林環境20052005

    • Author(s)
      山口裕文
    • Total Pages
      109-125
    • Publisher
      森林文化協会・朝日新聞社
    • Description
      「研究成果報告書概要(和文)」より

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Published: 2007-12-13  

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