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2007 Fiscal Year Final Research Report Summary

Molecular Bases of dehalorespiration in strictly anerobic bacteria

Research Project

Project/Area Number 17380055
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied microbiology
Research InstitutionBeppu University (2007)
Kyushu University (2005-2006)

Principal Investigator

FURUKAWA Kensuke  Beppu University, Faculty of Food Science and Nutrition, professor (90221556)

Co-Investigator(Kenkyū-buntansha) GOTO Masatoshi  Kyushu University, Department of Bioscience and Biotechnology, Assistant professor (90274521)
Project Period (FY) 2005 – 2007
Keywordsstrictly anaerobe / dechlorination / dehalorespiration / Desulfitobacterium
Research Abstract

In this study we have attempted to reveal the mechanism of halorespiration of strictly anaerobic bacterium, Desulfitobacterium hafniense strain Y51 which can dechlorinate voratile highly chlorinated pollutants, tetrachloroethene (PCE) and trichloroethene, to cis-dichloroethene. Strain Y51 can grow through this dehalorepiration process coupled with energy reservation. We have first cloned the pceABCT gene cluster. This gene duster was sandwiched by two nearly identical insertional sequence (IS) to form a composite transposon. PCE dehalogenase encoded by pceA was considered to associate with a membrane anchor. protein encoded by pceB. Immunoprecipitation analysis revealed that the PceT encoded by pceT specifically binds to the precursor PceA, but not to the mature PceA, suggesting that PceT act as a chaperone to fold precursor PceA before being transported to periplasm by Tat system.
The growth of strain Y51 was inhibited by chloroform at as low as 1 M. After prolonged lag time, a mutant strain termed LD which lost the entire pce gene cluster was highly generated. Interestingly, strain LD grew normally in the presence of chloroform even at 10μM. Biochemical and molecular analyses suggested that chloroform inhibit the electron transport system of fumarate respiration in wild type strain Y51 by binding with colinoid, a cofactor of PceA.
The detailed molecular mechanism of dehalorespiration in strictly anaerobic bacteria remained to be elucidated. Further work will be focused on development of the host-vector system in. strictly anaerobic bacteria along with the development of heterologous expression systems of these dehalorespiration genes.

  • Research Products

    (45 results)

All 2008 2007 2006 2005 Other

All Journal Article (22 results) (of which Peer Reviewed: 10 results) Presentation (21 results) Book (2 results)

  • [Journal Article] Metabolic engineering for solvent productivity by downregulation of the hydrogenase gene cluster hupCBA in Clostridium saccharoperbutylacetonicum strain N1-42008

    • Author(s)
      Nakayama, S.
    • Journal Title

      Appl.Microbiol.Biotechnol. 78

      Pages: 483-493

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Biochemical and genetic bases of dehalorespiration2008

    • Author(s)
      Futagami, T.
    • Journal Title

      The Chemical Record 8

      Pages: 1-12

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Metabolic engineering for solvent productivity by downregulation of thehydrogenase gene cluster hupCBA in Closiridiumsaceharoperbutylacelonicumstrain N 1-4.2008

    • Author(s)
      Nakayama, S.
    • Journal Title

      The Chemical Record 78

      Pages: 483-493

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Biochemical and genetic bases of dehalorespiration.2008

    • Author(s)
      Futagami, T.
    • Journal Title

      The Chemical Record 8

      Pages: 1-12

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] 脱ハロゲン呼吸細菌の還元的デハロゲナーゼ2007

    • Author(s)
      二神 泰基
    • Journal Title

      J.Environ.Biotechnol. 7

      Pages: 107-110

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] New host-vector system in solvent-producing Clostridium saccharoper butylacetonicum strain N142007

    • Author(s)
      Nakayama, S.
    • Journal Title

      Gen.Appl.Microbiol. 53

      Pages: 53-56

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Characterization of the sol operon in butanol-hyperproducing Clostridium saccharoperbutylacetonicum strain N1-4 and its degeneration mechanism2007

    • Author(s)
      Kosaka, T.
    • Journal Title

      Biosci.Biotechnol.Biochem. 71

      Pages: 58-68

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Microbial degradation of chlorinated environmental pollutants2007

    • Author(s)
      Taiki Futagami
    • Journal Title

      Waste Water Treatment Technology

      Pages: 130-138

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Reductive dehalogenase in halorespiring bacteria(Japanese)2007

    • Author(s)
      Futagami, T.
    • Journal Title

      J, Environ, Biotechnol. 7

      Pages: 1007-110

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] New host-vector system in solvent-producing Closiridium saccharoperbutylaceionicumstrain N14.2007

    • Author(s)
      Nakayama, S.
    • Journal Title

      Gen. App!. Microbiol. 53

      Pages: 53-56

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Characterization of the sot operon in butanol-hyperproducing Closiridiumsaccharoperbulylacetonicum strain N1-4 and its degeneration mechanism.2007

    • Author(s)
      Kosaka, T.
    • Journal Title

      Biosci. Biotechnol. Biochem. 71

      Pages: 56-68

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Oxygenases and dehalogenases:molecular approaches to efficient degradation of chlorinated environmental pollutants2006

    • Author(s)
      Furukawa K.
    • Journal Title

      Biosci.Biotechnol.Biochem. 70

      Pages: 2335-2348

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Effects of chloromethanes on growth of and deletion of the pce gene cluster in dehalorespiring Desulfitobacterium hafniense strain Y512006

    • Author(s)
      Futagami, T.
    • Journal Title

      Appl.Environ.Microbiol. 72

      Pages: 5998-6003

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Complete genome sequence of the dehalorespiring bacterium Desulfito bacterium hafniense Y51 and comparison with Dehalococcoides ethenogenes 1952006

    • Author(s)
      Nonaka, H.
    • Journal Title

      J.Bacteriol. 188

      Pages: 2262-2274

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Emergence of two types of nondechlorinating variants in the tetrachlo roethene-halorespiring Desulfitobacterium sp.strain Y512006

    • Author(s)
      Futagami, T.
    • Journal Title

      Appl.Microbiol.Biotechnol. 70

      Pages: 720-728

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Oxygenases and dehalogenases : molecular approaches to efficient degradation ofchlorinated environmental pollutants.2006

    • Author(s)
      Furukawa K.
    • Journal Title

      Biosci. Biotechnol. Biochem 0

      Pages: 2335-2348

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Effects of chioromethanes on growth of and deletion of the pee gene cluster indehalorespiring Desulfilobaclerium hafriiense strain Y512006

    • Author(s)
      Futagami, T.
    • Journal Title

      AppI. Environ. Microbiol. 72

      Pages: 5998-60003

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Complete genome sequence of the dehalorespiring bacterium Desulfito bacteriumhaJhienseY51 and comparison with Dehalococcoides ethenogenes 195.2006

    • Author(s)
      Nonaka, H.
    • Journal Title

      J. Bacteriol. 88

      Pages: 2262-2272

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Emergence of two types of nondechiorinating variants in the tetrachioroethene-halorespiring Desulfitobacterium sp. strain Y51.2006

    • Author(s)
      Futagami, T.
    • Journal Title

      App!. Microbiol. Biotechnol. 70

      Pages: 720-728

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Biochemical and molecular characterization of a tetrachloroethene dechlorinating Desulfitobacterium sp.strain Y51:a review2005

    • Author(s)
      Furukawa, K.
    • Journal Title

      J.Ind.Microbiol.Biotechnol. 33

      Pages: 534-541

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Microbial degradation of chlorinated organic compounds2005

    • Author(s)
      Kensuke Furukawa
    • Journal Title

      Biotechnology

      Pages: 437-447

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Biochemical and molecular characterization of a tetrachloroethene dechlorinating Desulfilobaclerium sp. strain Y51 : a review2005

    • Author(s)
      Furukawa, K.
    • Journal Title

      3. rd. Microbiol. Biotechnol 33

      Pages: 534-541

    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] 偏性嫌気性脱塩素化細菌に及ぼすクロロメタン類の影響2007

    • Author(s)
      深城 裕子
    • Organizer
      日本生物工学会大会
    • Place of Presentation
      広島
    • Year and Date
      20070925-27
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Effect of chloromethanes on strictly anaerobic dehalorepiring bacteria2007

    • Author(s)
      Fukai, Y.
    • Organizer
      Annual Meeting of Japan Society for Biotechnology
    • Place of Presentation
      Hiroshima
    • Year and Date
      20070925-27
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Effects of chloroform and trichloroethene on growth and stability of the pce genes of Desulfitobacterium hafniense strain Y512007

    • Author(s)
      Futagami, T.
    • Organizer
      ASM 107th General Meeting
    • Place of Presentation
      Toronto,Canada
    • Year and Date
      20070521-25
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Biochemical and molecular characterization of a tetrachloroethene haloresprong Desulfitobacterium hafniense strain Y512007

    • Author(s)
      Furukawa, K.
    • Organizer
      3rd Japan-Finland Biotechnology Symposium
    • Place of Presentation
      Palanien, Finland
    • Year and Date
      20070521-25
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Effects of chloroform and trichloroethene on growth and stability of the genes of Desulfitobacterium hafniense strain Y512007

    • Author(s)
      Futagami, T.
    • Organizer
      ASM 107th General Meetind
    • Place of Presentation
      Toronto, Canada
    • Year and Date
      20070521-25
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Desulfitobacterium hafniense Y51株の嫌気呼吸に及ぼすクロロフォルムの影響2007

    • Author(s)
      二神 泰基
    • Organizer
      日本農芸化学会大会
    • Place of Presentation
      東京
    • Year and Date
      2007-03-25
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Effect of chloroform on dehalorespiration in Desulfitobacterium hafniense2007

    • Author(s)
      Futagami, T.
    • Organizer
      Annual Meeting of Japan Society for Agricultural Chemistry
    • Place of Presentation
      Tokyo
    • Year and Date
      2007-03-25
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Biochemical and molecular characterization of a tetrachloroethene halorespiring Desulfitobacterium hafniense strain Y512006

    • Author(s)
      Furukawa, K.
    • Organizer
      3rd Japan-Finland Biotechnology Symposium
    • Place of Presentation
      Palanien,Finland
    • Year and Date
      20060809-11
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Effects of chloromethanes on the growth and deletion of pce gene cluster in dehalorespiring Desulfitobacterium hafniense strain Y512006

    • Author(s)
      Futagami, T.
    • Organizer
      ASM general meeting
    • Place of Presentation
      Orland,USA
    • Year and Date
      20060521-25
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Effects of chloromethanes on the growth and deletion of pce gene cluster in dehalorespiring Desupobacterium hafniense strain Y512006

    • Author(s)
      Futagami, T.
    • Organizer
      ASM general meeting
    • Place of Presentation
      Orland, USA
    • Year and Date
      20060521-25
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Biochemical and genetic bases of a chloroethene-dehalorespiring Desulfitobacterium hafniense strain Y512006

    • Author(s)
      Furukawa, K.
    • Organizer
      5th Asia-Pacific Biotechnology Congress
    • Place of Presentation
      Bohol,Philippines
    • Year and Date
      20060509-12
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Biochemical and genetic bases of a chloroethene-dehalorespiring Desulfitobacterium hafniense strain Y512006

    • Author(s)
      Furukawa, K.
    • Organizer
      5th Asia-Pacific Biotechnology Congress
    • Place of Presentation
      Bohol, Philippines
    • Year and Date
      20060509-12
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] 微生物機能の進化と退化2006

    • Author(s)
      古川 謙介
    • Organizer
      日本農芸化学会西日本支部創立70周年記念シンポジウム
    • Place of Presentation
      佐賀市
    • Year and Date
      2006-09-29
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Evolution and degeneration of microbial functions2006

    • Author(s)
      Furukawa, K.
    • Organizer
      Nishinihon Branch Symposium of Japan Society of Agricultural Chemistry
    • Place of Presentation
      Saga
    • Year and Date
      2006-09-29
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] 環境汚染有害塩素化合物を分解するスーパー微生物の開発2006

    • Author(s)
      古川 謙介
    • Organizer
      第43回化学関連支部合同九州大会
    • Place of Presentation
      北九州市
    • Year and Date
      2006-07-08
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] 脱ハロゲン呼吸細菌の遺伝生化学と機能進化2006

    • Author(s)
      古川 謙介
    • Organizer
      発酵と代謝研究会シンポジウム
    • Place of Presentation
      福岡
    • Year and Date
      2006-07-07
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Biochemical and genetic bases of dehalorespiration2006

    • Author(s)
      Furukawa, K.
    • Organizer
      Ferentation and metabolism Symposium
    • Place of Presentation
      Fukuoka
    • Year and Date
      2006-07-07
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] PCE Dehalorespiring Desulfitobacterium sp.Y51:Analyses of Two Types Deletion Variants2005

    • Author(s)
      Futagami, T.
    • Organizer
      Joint Meeting of the three divisions of the IUMS
    • Place of Presentation
      San Francisco,USA
    • Year and Date
      20050723-28
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] PCE Dehalorespiring Desulfflobacterium sp. Y51 : Analyses of Two Types Deletion Variants.2005

    • Author(s)
      Futagami, T.
    • Organizer
      Joint Meeting of the three divisions of the IUMS
    • Place of Presentation
      San Francisco, USA
    • Year and Date
      20050723-28
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Molecular bases and development of novel metabolic function in environmental science2005

    • Author(s)
      Furukawa, K.
    • Organizer
      Annual Meeting of Japan Society of Agricultural Chemistry
    • Place of Presentation
      Sapporo
    • Year and Date
      2005-03-27
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Development of super bugs for degtadation of chlorinated environmental Pollutants

    • Author(s)
      Furukawa, K.
    • Organizer
      43th Kyusyu Branch Joint Meeting for Chemistry
    • Place of Presentation
      Kitakyusyu
    • Description
      「研究成果報告書概要(欧文)」より
  • [Book] 排水・汚水処理技術集成2007

    • Author(s)
      二神 泰基
    • Total Pages
      130-138
    • Publisher
      NTS出版
    • Description
      「研究成果報告書概要(和文)」より
  • [Book] バイオテクノロジー総覧2005

    • Author(s)
      古川 謙介
    • Total Pages
      437-447
    • Publisher
      通算資料出版会
    • Description
      「研究成果報告書概要(和文)」より

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Published: 2010-02-04  

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