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2010 Fiscal Year Final Research Report

Structure, rotation and regulation of ATP synthase(FoF1)

Research Project

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Project/Area Number 18107004
Research Category

Grant-in-Aid for Scientific Research (S)

Allocation TypeSingle-year Grants
Research Field Functional biochemistry
Research InstitutionKyoto Sangyo University (2010)
Tokyo Institute of Technology (2006-2009)

Principal Investigator

YOSHIDA Masasuke  京都産業大学, 総合生命科学部, 教授 (90049073)

Co-Investigator(Kenkyū-buntansha) HISABORI Toru  東京工業大学, 資源化学研究所, 教授 (40181094)
Co-Investigator(Renkei-kenkyūsha) MURAKAMI Satoshi  東京工業大学, 生命理工学部, 教授 (30300966)
Project Period (FY) 2006 – 2010
KeywordsATP合成 / ATP合成酵素 / F_oF_1 / モータータンパク質 / 生体エネルギー
Research Abstract

We made F_1-ATPases containing one or two mutant. β subunits that have the altered catalytic kinetics. The analysis of their asymmetric stepwise rotations reveal that, when watching one. β subunit in F_1-ATPase, it binds ATP at 0°, cleaves ATP after~ 200°rotation, and undergoes the final catalytic event, presumably the product release, after~ 320°rotation. Three. β subunits carry out this cycle at 120°difference like "trolling a tune" and their cyclic inter-domain bending motions would induce the rotation of γ subunit.
Rotation of the central shaft γ subunit in a molecular motor F_1-ATPase is assumed to correlate with and probably be driven by domain motions of the three catalytic. β subunits. Here we observe directly these. β motions through an attached fluorophore, concomitantly with 80 degrees and 40 degrees substep rotations of γ in the same single molecules. We show the sequence of conformations that each β subunit undergoes in three-step bending, an approximately 40 degrees counterclockwise turn followed by two approximately 20 degrees clockwise turns, occurring in synchronization with two substep rotations of γ. The results indicate that most previous crystal structures mimic the conformational set of three β subunits in the catalytic dwells. Moreover, a previously undescribed set of β conformations, open, closed and partially closed, is revealed in the ATP-waiting dwells. The present study thus bridges the gap between the chemical and mechanical steps in F_1-ATPase.

  • Research Products

    (8 results)

All 2008 2007 Other

All Journal Article (3 results) Presentation (4 results) Remarks (1 results)

  • [Journal Article] Cooperative three-step motions in catalytic subunits of F_1-ATPase correlate with 80 degrees and 40 degrees substep rotations2008

    • Author(s)
      Masaike T, Koyama-Horibe F, Oiwa K, Yoshida M, Nishizaka T
    • Journal Title

      Nat Struct Mol Biol

      Volume: 15 Pages: 1326-33

  • [Journal Article] F_1-ATPase rotates by an asymmetric, sequential mechanism using all three catalytic subunits2007

    • Author(s)
      Ariga T, Muneyuki E, Yoshida M
    • Journal Title

      Nature Struct. Mol. Biol

      Volume: 14 Pages: 841-846

  • [Journal Article] Structures of the thermophilic F1-ATPaseεsubunit suggesting ATP-regulated arm motion of its C-terminal domain in F12007

    • Author(s)
      Yagi H, Kajiwara N, Tanaka, Tsukihara T, Kato-Yamada Y, Yoshida M, Akutsu H
    • Journal Title

      Proc Natl Acad Sci USA

      Volume: 107 Pages: 11233-11238

  • [Presentation] ATP合成酵素の精製における界面活性剤の検討と変異ATP合成酵素の安定性2008

    • Author(s)
      三留規誉, 大坂谷章子, 鈴木俊治, 吉田賢右
    • Organizer
      第31回日本分子生物学会年会第81回日本生化学会大会合同大会
    • Year and Date
      20081200
  • [Presentation] Mechanism and regulation of F_oF_<1-> motor2008

    • Author(s)
      M. Yoshida
    • Organizer
      Plenary lecture at 15th European Bioenergetics Conference
    • Place of Presentation
      Dublin(Ireland)
    • Year and Date
      2008-07-20
  • [Presentation] Function of epsilon subunit in Bacillus PS3 F_oF_1-ATP synthase2008

    • Author(s)
      T. Suzuki, C. Wakabayashi, B. A. Feniouk, N. Taniguchi, M. Yoshida
    • Organizer
      15th European Bioenergetics Conference
    • Place of Presentation
      Dublin(Ireland)
    • Year and Date
      2008-07-20
  • [Presentation] Regulatory transition of subunit epsilon in ATP synthase from Bacillus PS32008

    • Author(s)
      B. A. Feniouk, T. Suzuki, M. Yoshida
    • Organizer
      15th European Bioenergetics Conference
    • Place of Presentation
      Dublin(Ireland)
    • Year and Date
      2008-07-20
  • [Remarks]

    • URL

      http://www.cc.kyoto-su.ac.jp/~fmotojim/index-j.html

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Published: 2013-07-31  

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