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2010 Fiscal Year Annual Research Report

プロテアソームを基軸としたタンパク質分解系の包括的研究

Research Project

Project/Area Number 21000012
Research InstitutionTokyo Metropolitan Organization for Medical Research

Principal Investigator

田中 啓二  (財)東京都医学総合研究所, 東京都臨床医学総合研究所, 理事 (10108871)

Co-Investigator(Kenkyū-buntansha) 村田 茂穂  東京大学, 大学院・薬学系研究科, 教授 (20344070)
Keywords蛋白質 / バイオテクノロジー / プロテオーム / 脳神経疾患 / 免疫学
Research Abstract

26Sプロテアソームは不要になった細胞内のタンパク質を選択的に分解するための大規模な細胞内装置である。本酵素は触媒機能を司る20S CP(Core Particle : 別名20Sプロテアソーム)の両端に調節ユニットである19S RP(Regulatory Particle)が会合した分子量250万の巨大で複雑な多成分複合体である。CPはα-Ringとβ-Ring(各々7種のα/βサブユニットから構成)がαββαの順で会合した円筒型粒子であり、RPは6個のATPase(Rpt1-6)と約15個のnon-ATPase(Rpn1-15)サブユニットがLid(蓋部)とBase(基底部)を構成している。本年、以下の4項目で顕著な成果を挙げた。(1)プロテアソームの遺伝学的研究においては、プロテアソーム分子集合因子(PAC1 : α-Ring形成因子)の条件的KOマウスを作出、このシャペロン依存性の20Sプロテアソーム形成がマウスの個体発生、脳の増殖・分化、肝臓の恒常性維持に必須であることを明らかにした。(2)われわれが作出した胸腺プロテアソーム欠損マウスと単一のMHCクラスI分子を持った遺伝子改変マウスとの交配実験から胸腺プロテアソームが胸腺におけるCD8^+Tリンパ球の正の選択を介したレパトア形成に関与していることを証明した。(3)オートファジー選択的基質であるp62がKeap1(酸化ストレス応答ユビキチンリガーゼ)に直接会合して(抗酸化/解毒応答)マスター転写因子Nrf2を解離・(核移行)活性化する新しいオートファジー障害依存性のストレス応答機構を発見した。(4)家族性パーキンソン病の原因遺伝子であるPINK1とParkinが介在したミトコンドリアの新しい品質管理(選択的オートファジーによる損傷ミトコンドリアのクリアランス/浄化)機構の発見とパーキンソン病の発症機構の解明に成功した。

  • Research Products

    (51 results)

All 2011 2010 Other

All Journal Article (31 results) (of which Peer Reviewed: 31 results) Presentation (18 results) Book (1 results) Remarks (1 results)

  • [Journal Article] Sharpin is a component of the NF-κB activating linear ubiquitin chain assembly complex.2011

    • Author(s)
      Tokunaga, F., Nakagawa, T., Nakaharal, M., Saeki, Y., Taniguchi, M., Sakata, S., Tanaka, K., Nakano, H., Iwai, I.
    • Journal Title

      Nature

      Volume: 471 Pages: 633-636

    • Peer Reviewed
  • [Journal Article] The Ufm1-activating enzyme Uba5 is indispensable for erythroid differentiation in mice.2011

    • Author(s)
      Tatsumi, K., Yamamoto-Mukai, H., Shimizu, R., Waguri, S., Sou, Y-S., Sakamoto, A., Taya, C., Shitara, H., Hara, T., Chung, C.H., Tanana, K., Yamamoto, M., Komatsu, M.
    • Journal Title

      Nat.Commun.

      Volume: 2 Pages: 181

    • Peer Reviewed
  • [Journal Article] Structure of ubiquitin-fold modifier 1 specific protease, UfSP2.2011

    • Author(s)
      Ha, B.H., Jeon, Y.J., Shin, S.C, Tatsumi, K., Komatsu, M., Tanaka, K., Watson, C.M., Wallis, G., Chung, C.H., Kim, E.E.
    • Journal Title

      J.Biol.Chem.

      Volume: 286 Pages: 10248-10257

    • Peer Reviewed
  • [Journal Article] Autophagy in the intestinal epithelium reduces endotoxin-induced inflammatory responses by inhibiting NF-κB activation.2011

    • Author(s)
      Fujishima, Y., Nishiumi, S., Masuda, A., Inoue, J., Nguyen, G.M., Irino, Y., Komatsu, M., Tanaka, K., Kutsumi, H., Azuma, T., Yoshida, M.
    • Journal Title

      Arch.Biochem.Biophys.

      Volume: 506 Pages: 223-235

    • Peer Reviewed
  • [Journal Article] The CD40-Autophagy Pathway Is Needed for Host Protection Despite IFN-Г-Dependent Immunity and CD40 Induces Autophagy via Control of P21 Levels.2011

    • Author(s)
      Portillo, J.A., Okenka, G., Reed, E., Subauste, A., Van, Grol, J., Gentil, K., Komatsu, M., Tanaka, K., Landreth, G., Levine, B., Subauste, C.S.
    • Journal Title

      PLoS One.

      Volume: 5 Pages: e14472

    • Peer Reviewed
  • [Journal Article] Ontogeny of thymic cortical epithelial cells expressing thymoproteasome subunit β5t.2011

    • Author(s)
      Ripen, AM., Nitta, T., Murata, S., Tanaka, K., Takahama, Y.
    • Journal Title

      Eur.J.Immunol.

      Volume: 32 Pages: 29-40

    • Peer Reviewed
  • [Journal Article] Akt Suppresses Retrograde Degeneration of Dopaminergic Axons by Inhibition of Macroautophagy.2011

    • Author(s)
      Cheng, H-C., Kim, SR., Oo, TF., Kareva, T., Yarygina, O., Rzhetskaya, M., Wang, C., During, M., Talloczy, Z., Tanaka, K., Komatsu, M., Kobayashi, K., Okano, H., Kholodilov, N., Burke, RE.
    • Journal Title

      J.Neurosci.

      Volume: 31 Pages: 2125-2135

    • Peer Reviewed
  • [Journal Article] Autophagy-deficient mice develop multiple liver tumors.2011

    • Author(s)
      Takamura, A., Komatsu, M., Hara, T., Sakamoto, A., Kishi, C., Waguri, S., Eishi, Y., Hino O., Tanaka, K., Mizushima, N.
    • Journal Title

      Genes Dev.

      Volume: 25 Pages: 795-800

    • Peer Reviewed
  • [Journal Article] Role of persistent activation of Nrf2 through p62 in hepatocarcinogenesis.2011

    • Author(s)
      Inami, Y., Waguri, S., Sakamoto, A., Kouno, T., Nakada, K., Hino, O., Watanabe, S., Andoh, J., Iwadate, M., Yamamoto, M., Lee.M-S., Tanaka, K., Komatsu, K.
    • Journal Title

      J.Cell.Biol.

      Volume: 193 Pages: 275-284

    • Peer Reviewed
  • [Journal Article] Liver autophagy contributes to the maintenance of blood glucose and amino acid levels.2011

    • Author(s)
      Ezaki, J., Matsumoto, N., Takeda-Ezaki, M., Komatsu, M., Takahashi, K., Hiraoka, Y., Taka, H., Fujimura, T., Takehana, K., Yoshida, M., Iwata, J., Tanida, I., Furuya, N., Zheng, D-m., Tada, N., Tanaka, K., Kominami, E., Uenol, T.
    • Journal Title

      Autophagy

      Volume: (In press)

    • Peer Reviewed
  • [Journal Article] Control of AIF-mediated cell death by antagonistic functions of CHIP ubiquitin E3 ligase and USP2 deubiquitinating enzyme.2011

    • Author(s)
      Oh, K.H., Yang, S.W., Park, J.M., Seol, J.H., Iemura, S., Natsume, T., Murata, S., Tanaka, K., Jeon, Y.J., Chung, C.H.
    • Journal Title

      Cell Death and Differ.

      Volume: (In press)

    • Peer Reviewed
  • [Journal Article] The catalytic activity of Ubp6 enhances maturation of the proteasomal regulatory particle.2011

    • Author(s)
      Sakata, E., Stengel, F., Fukunaga, K., Zhou, M., Saeki, Y., Forster, F., Baumeister, W., Tanaka, K., Robinson, CV.
    • Journal Title

      Mol.Cell

      Volume: (In press)

    • Peer Reviewed
  • [Journal Article] Parkin Mediates Apparent E2-independent Monoubiquitination In Vitro and Contains an Intrinsic Activity that Catalyzes Polyubiquitination.2011

    • Author(s)
      Chew, KCM., Matsuda, M., Saisho, K., Lim, GGY., Chai, C., Tan, HM., Tanaka, K., Lim 1, K-L.
    • Journal Title

      PLoS ONE.

      Volume: (In press)

    • Peer Reviewed
  • [Journal Article] Thymoproteasome shapes immunocompetent repertoire of CD8 T cells.2010

    • Author(s)
      Nitta, T., Murata, S., Sasaki, K., Fujii, H., Ripen, A.M., Ishimaru, N., Koyasu, S., Tanaka, K., Takahama, Y.
    • Journal Title

      Immunity

      Volume: 32 Pages: 29-40

    • Peer Reviewed
  • [Journal Article] Crystal structure of UbcH5b~ubiquitin intermediate : Insight into the formation of the self-assembled E2~Ub conjugates.2010

    • Author(s)
      Sakata, E., Satoh, T., Yamamoto, S., Yamaguchi, Y., Yagi-Utsumi, M., Kurimoto, E., Tanaka, K., Wakatsuki, S., Kato, K.
    • Journal Title

      Structure

      Volume: 18 Pages: 138-147

    • Peer Reviewed
  • [Journal Article] Crystallization and preliminary X-ray characterization of Skp1-FBG3 complex.2010

    • Author(s)
      Kumanomidou, T., Nakagawa, T., Mizushima, T., Suzuki, A., Tokunaga, F., Iwai, K., Yoshida, Y., Tanaka, K., Yamane, T.
    • Journal Title

      Acta Crystallogr Sect F Struct Biol Cryst Commun.

      Volume: 66 Pages: 95-98

    • Peer Reviewed
  • [Journal Article] Novel type of E3 ligase for Ufm1-conjugating system.2010

    • Author(s)
      Tatsumi, K., Sou, Y., Tada, N., Nakamura, E., Iemura, S., Natsume, T., Kang, SW., Chung, CH., Kasahara, M., Kominami, E., Tanaka, K., Komatsu, M.
    • Journal Title

      J.Biol.Chem.

      Volume: 285 Pages: 5417-5427

    • Peer Reviewed
  • [Journal Article] The selective autophagy substrate p62 activates the stress responsive transcription factor Nrf2 through inactivation of Keap1.2010

    • Author(s)
      Komatsu, M., Kurokawa, H., Waguri, S., Taguchi, K., Kobayashi, A., Ichimura, Y., Sou, Y-S., Ueno, I., Sakamoto, A., Tong.K.I., Kim, M., Nishito Y., Iemura, S., Natsume, T., Ueno, T., Kominami, E., Motohashi, H., Tanaka, K., Yamamoto, M.
    • Journal Title

      Nat.Cell Biol.

      Volume: 12 Pages: 213-223

    • Peer Reviewed
  • [Journal Article] Crystal structure of yeast Rpn14, a chaperone of the 19S regulatory particles of the proteasome.2010

    • Author(s)
      Kim, S., Saeki, S., Fukunaga, K., Suzuki, A., Takagi, K., Yamane, T., Tanaka, K., Mizushima, T., Kato, K.
    • Journal Title

      J.Biol.Chem.

      Volume: 285 Pages: 15159-151566

    • Peer Reviewed
  • [Journal Article] PINK1 stabilized by depolarization recruits Parkin to damaged mitochondria and activates latent Parkin for mitophagy.2010

    • Author(s)
      Matsuda, N., Sato, S., Shiba, K., Okatsu, K., Saisho, K., Gautier, CA Sou, Y., Saiki, S., Kawajiri, S., Sato, F., Kimura, M., Komatsu, M., Hattori, N., Tanaka, K.
    • Journal Title

      J Cell Biol.

      Volume: 189 Pages: 211-221

    • Peer Reviewed
  • [Journal Article] p62/SQSTM1 cooperates with Parkin for perinuclear clustering of depolarized mitochondria.2010

    • Author(s)
      Okatsu, K., Saisho, K., Shimanuki, M., Nakada, K., Shitara, H., Sou, Y., Kimura, M., Sato, S., Hattori, N., Komatsu, M., Tanaka.K., Matsuda, N.
    • Journal Title

      Genes Cells

      Volume: 15 Pages: 887-900

    • Peer Reviewed
  • [Journal Article] Dissection of the assembly pathway of the proteasome lid in Saccharomyces cerevisiae.2010

    • Author(s)
      Fukunaga, K., Kudo, T., Toh-e, A., Tanaka, K., Saeki, Y.
    • Journal Title

      Biochem.Biophys.Res.Commun.

      Volume: 396 Pages: 1048-1053

    • Peer Reviewed
  • [Journal Article] PAC1 gene knockout reveals an essential role of chaperone-mediated 20S proteasome biogenesis and importance of latent 20S proteasomes in maintaining cellular homeostasis.2010

    • Author(s)
      Sasaki, K., Hamazaki, J., Koike, M., Hirano, Y., Komatsu, M., Uchiyama, Y., Tanaka, K., Murata, M.
    • Journal Title

      Mol Cell.Biol.

      Volume: 30 Pages: 3864-3874

    • Peer Reviewed
  • [Journal Article] Polyubiquitin conjugation to NEMO by triparite motif protein 23 (TRIM23) is critical in antiviral defense.2010

    • Author(s)
      Arimoto, K.I., Funami, K., Saeki, Y., Tanaka, K., Okawa, K., Takeuchi, O., Akira, S., Murakami, Y., Shimotohno, K.
    • Journal Title

      Proc.Natl.Acad.Sci.USA

      Volume: 07 Pages: 15856-15861

    • Peer Reviewed
  • [Journal Article] Activity-based profiling reveals reactivity of the murine thymoproteasome-specific subunit beta5t.2010

    • Author(s)
      Florea, B.I., Verdoes, M., Li, N., van den Linden, W.A., Geurink, P.P., van den Elst, H., Hofmann, T., de Ru, A., van Veelen, P.A., Tanaka, K., Sasaki, K., Murata, S., den Dulk, H., Brouwer, J., Ossendorp, F.A., Kisselev, A.F., Overkleeft, H.S.
    • Journal Title

      Chem Biol.

      Volume: 17 Pages: 795-801

    • Peer Reviewed
  • [Journal Article] CHIP-dependent termination of MEKK2 regulates temporal ERK activation required for proper hyperosmotic response.2010

    • Author(s)
      Maruyama, T., Kadowaki, H., Okamoto, N., Nagai, A., Naguro, I., Matsuzawa, A., Shibuya, H., Tanaka, K., Murata, S., Takeda, K., Nishito, h H., Ichijo, H.
    • Journal Title

      EMBO J.

      Volume: 9 Pages: 2501-2514

    • Peer Reviewed
  • [Journal Article] Ubiquitin accumulation in autophagy-deficinet mice is dependent on the Nrf2-mediated stress response pathway : a potential role for protein aggregation in autophagic substrate selection.2010

    • Author(s)
      Riley, B.E., Kaiser, S.E., Shaler, T.A., Ng, A.C.Y., Hara, T., Hipp, M.S., Lage, K., Xavier, R.J., Ryu, K-Y., Taguchi, K., Yamamoto, M., Tanaka, K., Mizushima, N., Komatsu, M., Kopito, R.R.
    • Journal Title

      J.Cell Biol.

      Volume: 191 Pages: 537-552

    • Peer Reviewed
  • [Journal Article] Does impairment of the ubiquitin-proteasome system or the autophagy-lysosome pathway predispose individuals to neurodegenerative disorders such as Parkinson's disease?2010

    • Author(s)
      Matsuda, N., Tanaka, K.
    • Journal Title

      J Alzheimer's Dis.

      Volume: 19 Pages: 1-9

    • Peer Reviewed
  • [Journal Article] Lectin-like ERAD players in ER and cytosol.2010

    • Author(s)
      Yoshida, Y., Tanaka, K.
    • Journal Title

      Biochem.Biophys.Acta

      Volume: 1800 Pages: 172-180

    • Peer Reviewed
  • [Journal Article] Role of thymic cortex-specific self-peptides in positive selection of T cells.2010

    • Author(s)
      Takahama, Y., Nitta, T., Ripen, A.M., Nitta, S., Murata, M., Tanaka, K.
    • Journal Title

      Semin.Immunol.

      Volume: 22 Pages: 287-293

    • Peer Reviewed
  • [Journal Article] Regulatory mechanisms involved in the control of ubiquitin homeostasis.2010

    • Author(s)
      Kimura, Y., Tanaka, K.
    • Journal Title

      J.Biochem.

      Volume: 147 Pages: 793-798

    • Peer Reviewed
  • [Presentation] Parkinson's disease : a quality control disease of depolaized mitochondoria.2011

    • Author(s)
      Keiji Tanaka
    • Organizer
      The 1^<st> small Korea/Japan symposium
    • Place of Presentation
      Seoul, Korea(招待講演)
    • Year and Date
      20110127-20110129
  • [Presentation] ユビキチン・プロテアソームシステムによるタンパク質分解2011

    • Author(s)
      田中啓二
    • Organizer
      京都産業大学・総合生命科学部 開設記念シンポジウム"タンパク質の一生と生命システム」
    • Place of Presentation
      京都(招待講演)
    • Year and Date
      2011-03-10
  • [Presentation] 細胞内リサイクルシステム-新陳代謝の科学-2011

    • Author(s)
      田中啓二
    • Organizer
      第5回炎症・脂質代謝・メタボリサーチフォーラム
    • Place of Presentation
      東京大学医学部教育研究棟、東京(招待講演)
    • Year and Date
      2011-02-12
  • [Presentation] The PINK1/Parkin pathway controls mitochondrial homeostasis whose impairment causes Parkinson's disease.2010

    • Author(s)
      Keiji Tanaka
    • Organizer
      Global COE International Symposium/Retreat 2010
    • Place of Presentation
      Awaji Island, Japan(招待講演)
    • Year and Date
      20101105-20101106
  • [Presentation] Autophagy and Parkinson's Disease2010

    • Author(s)
      Keiji Tanaka
    • Organizer
      1^<st> Sino-Japan Autophagy Symposium
    • Place of Presentation
      Xi'an, China(招待講演)
    • Year and Date
      20101015-20101017
  • [Presentation] In Depth Analysis of protein Degradation in the Life Science Field.2010

    • Author(s)
      田中啓二
    • Organizer
      69^<th> Annual Meeting of The Japanese Cancer Association "Conquering Cancer and Collective Wisdom
    • Place of Presentation
      大阪(招待講演)
    • Year and Date
      20100922-20100924
  • [Presentation] Assembly of Eukaryotic Proteasomes assisted by Molecular Chaperones"2010

    • Author(s)
      Keiji Tanaka
    • Organizer
      The 3^<rd> International Symposium on Protein Community
    • Place of Presentation
      Hotel Nikko Nara, Nara, Japan(招待講演)
    • Year and Date
      20100913-20100916
  • [Presentation] Impairment of proteolytic homeostasis as cause of neurodegeneration2010

    • Author(s)
      Keiji Tanaka
    • Organizer
      S1 JOINT SYMPOSIUM [Key Mechanisms in Neurodegeneration] PRION & ICN Congress
    • Place of Presentation
      Salzburg, Austria(招待講演)
    • Year and Date
      20100908-20100912
  • [Presentation] 私のプロテアソーム研究-免疫との予期しなかった遭遇-2010

    • Author(s)
      田中啓二
    • Organizer
      千葉大学G-COEプログラム"免疫システム統御治療学"免疫学リトリート
    • Place of Presentation
      千葉生命の森リゾート、千葉(招待講演)
    • Year and Date
      20100904-20100905
  • [Presentation] Autophagic Control of Mitochondrial Homeostasis and Neurodegeneration" [Mechanism underling the cause of Parkinson's Disease : The functions of Parkin/PINK1]2010

    • Author(s)
      Keiji Tanaka
    • Organizer
      Proteolysis and Neurodegeneration : 5th INPROTEOLYSIS meeting, EMBO Workshop
    • Place of Presentation
      Madrid, Spain(招待講演)
    • Year and Date
      20100504-20100507
  • [Presentation] 細胞内リサイクルシステム-新陳代謝の科学-2010

    • Author(s)
      田中啓二
    • Organizer
      JSTさきがけ「代謝と機能制御」領域 研究報告会シンポジウム:特別講演
    • Place of Presentation
      東京大学弥生講堂・一條ホール、東京(招待講演)
    • Year and Date
      2010-12-13
  • [Presentation] Role of Proteolysis in Liver Pathophysiology.2010

    • Author(s)
      Keiji Tanaka
    • Organizer
      The 9^<th> JSH Single Topic Conference "NASH 2010"
    • Place of Presentation
      Tokyo, Japan(招待講演)
    • Year and Date
      2010-11-19
  • [Presentation] 私の履歴書 -プロテアソームを基軸としたタンパク質分解研究-2010

    • Author(s)
      田中啓二
    • Organizer
      第15回病態プロテアーゼ学会学術集会"『日本学士院賞』受賞記念講演
    • Place of Presentation
      千里ライフサイエンスセンター、大阪(招待講演)
    • Year and Date
      2010-08-20
  • [Presentation] 細胞内リサイクルシステム-新陳代謝と健康-2010

    • Author(s)
      田中啓二
    • Organizer
      徳島大学市民公開講演会~生命の謎に迫る~
    • Place of Presentation
      長井記念ホール、徳島(招待講演)
    • Year and Date
      2010-07-31
  • [Presentation] パーキンソン病の分子病態機序のブレイクススルー:Parkin/PINK1の機能"パーキンソン病の分子病態機序2010

    • Author(s)
      田中啓二、松田憲之、尾勝圭
    • Organizer
      新世代の神経学-Breakthrough to the NEXT STAGE-、第51回日本神経学会総会
    • Place of Presentation
      東京(招待講演)
    • Year and Date
      2010-05-22
  • [Presentation] The Structure and Biological Functions of Proteasomes (+The Role of PINK1/Parkin in Mitophagy and Parkinson's Disease).2010

    • Author(s)
      田中啓二
    • Organizer
      第62回日本細胞生物学会大会 (The 62nd Annual Meeting of the Japanese Society of Cell Biology)・特別講演
    • Place of Presentation
      Osaka(招待講演)
    • Year and Date
      2010-05-20
  • [Presentation] プロテアソーム:オーバービューと免疫研究の最前線2010

    • Author(s)
      田中啓二
    • Organizer
      第54回日本リウマチ学会総会・学術集会:特別講演
    • Place of Presentation
      神戸(招待講演)
    • Year and Date
      2010-04-23
  • [Presentation] 蛋白質リサイクルシステムの意義とその破綻による疾病2010

    • Author(s)
      田中啓二
    • Organizer
      科学技術政策研究所シンポジウム:近未来への招待状~ナイスステップな研究者2009からのメッセージ~
    • Place of Presentation
      文部科学省第2講堂、東京(招待講演)
    • Year and Date
      2010-04-22
  • [Book] Assembly and function of the proteasome. "Ubiquitin Family Modifiers and the Proteasome : Reviews and Protocols"2011

    • Author(s)
      Saeki, Y, Tanaka, K.
    • Publisher
      Humana Press. SPRINGER SCIENCE+BUSINESS MEDIA, New York, (USA)(In press)
  • [Remarks]

    • URL

      http://www.igakuken.or.jp/

URL: 

Published: 2012-07-19  

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