Exploration of the common body plan in land plants

2011 Fiscal Year Final Research Report

• Project/Area Number: 21370107
• Research Category: Grant-in-Aid for Scientific Research (B)
• Allocation Type: Single-year Grants
• Section: 一般
• Research Field: Evolutionary biology
• Research Institution: National Institute for Basic Biology
• Principal Investigator: HASEBE Mitsuyasu 基礎生物学研究所, 生物進化研究部門, 教授 (40237996)
• Co-Investigator(Kenkyū-buntansha): HIWATASHI Yuji 基礎生物学研究所, 生物進化研究部門, 助教教 (10373193)
• Project Period (FY): 2009 – 2011
• Keywords: ポリコーム / CLF / 世代交代 / 進化 / リニア

Research Abstract

The purpose of this project is to infer the common developmental program in land plants. We compared localization of auxin and class 1 KNOX protein between sporophyte-like structure formed in polycomb-repression complex loss-of-function mutants of the moss Physcomitrella patens and the flowering plant Arabidopsis thaliana. The localization patterns of auxin and KNOX protein were similar to those in compound leaf development, suggesting this developmental motif is conserved among land plants

Research Products

• [Journal Article] Physcomitrella PpORS, basal to plant type III polyketide synthases in phylogenetic trees, is a very long chain 2'-oxoalkylresorcinol synthase (2013)
  • Author(s): Kim, S.Y., Colpitts, C.C., Wiedemann, G., Jepson, C., Rahimi, M., Rothwell, J.R., McInnes, A.D., Hasebe, M., Reski, R., Sterenberg, B.T., and Suh, D.Y.
  • Journal Title: J Biol Chem Volume: 288 Pages: 2767-2777
• [Journal Article] A SABATH Methyltransferase from the moss Physcomitrella patens catalyzes S-methylation of thiols and has a role in detoxification. (2012)
  • Author(s): Zhao, N., Ferrer, J.L., Moon, H.S., Kapteyn, J., Zhuang, X., Hasebe, M., Stewart, C.N., Jr., Gang, D.R., and Chen, F.
  • Journal Title: Phytochemistry Volume: 81 Pages: 31-41
• [Journal Article] AP2-type transcription factors determine stem cell identity in the moss Physcomitrella patens. (2012)
  • Author(s): Aoyama, T., Hiwatashi, Y., Shigyo, M., Kofuji, R., Kubo, M., Ito, M., and Hasebe, M.
  • Journal Title: Development Volume: 139 Pages: 3120-3129
• [Journal Article] NIMA-related kinases 6, 4, and 5 interact with each other to regulate microtubule organization during epidermal cell expansion in Arabidopsis thaliana (2011)
  • Author(s): Motose, H., Hamada, T., Yoshimoto, K.,Murata, T.,Hasebe, M., Watanabe, Y.,Hashimoto, T., Sakai, T., and Takahashi, T
  • Journal Title: Plant J Volume: 67 Pages: 993-1005
• [Journal Article] The Selaginella genome identifies genetic changes associated with the evolution of vascular plants (2011)
  • Author(s): Banks, J.A., Nishiyama, T., Hasebe, M., 他
  • Journal Title: Science Volume: 332 Pages: 960-963
• [Journal Article] Biological implications of the occurrence of 32 members of the XTH (xyloglucan endotransglucosylase/hydrolase) family of proteins in the bryophyte Physcomitrella patens (2010)
  • Author(s): Yokoyama, R., Uwagaki, Y., Sasaki, H., Harada, T., Hiwatashi, Y., Hasebe, M., and Nishitani, K
  • Journal Title: Plant J Volume: 64 Pages: 645-656
• [Journal Article] A dibasic amino acid pair conserved in the activation loop directs plasma membrane localization and is necessary for activity of plant type I/II phosphatidylinositol phosphate kinase (2010)
  • Author(s): Mikami, K., Saavedra, L., Hiwatashi, Y., Uji, T., Hasebe, M., and Sommarin, M
  • Journal Title: Plant Physiol Volume: 153 Pages: 1004-1015
• [Journal Article] Endogenous diterpenes derived from ent-kaurene, a common gibberellin precursor, regulate protonema differentiation of the moss Physcomitrella patens (2010)
  • Author(s): Hayashi, K., Horie, K., Hiwatashi, Y., Kawaide, H., Yamaguchi, S., Hanada, A., Nakashima, T., Nakajima, M., Mander, L.N., Yamane, H., Hasebe, M., and Nozaki, H
  • Journal Title: Plant Physiol Volume: 153 Pages: 1085-1097
• [Journal Article] A polycomb repressive complex 2 gene regulates apogamy and gives evolutionary insights into early land plant evolution (2009)
  • Author(s): Okano, Y., Aono, N., Hiwatashi, Y., Murata, T., Nishiyama, T., Ishikawa, T., Kubo, M., and Hasebe, M
  • Journal Title: Proc.Natl Volume: 106 Pages: 16321-16326
• [Journal Article] The Gibberellin perception system evolved to regulate a pre-existing GAMYB-mediated system during land plant evolution
  • Author(s): Aya, K., Hiwatashi, Y., Kojima, M., Sakakibara, H., Ueguchi-Tanaka, M., Hasebe, M., and Matsuoka, M
  • Journal Title: Nat Commun Volume: 2 Pages: 544
• [Presentation] 「Decrease of TAS3 tasiRNA promotes reprogramming of Physcomitrella differentiated leaf cells to stem cells with auxin response factor accumulation」 (2013)
  • Author(s): 永島明知、石川雅樹、西山智明、日渡祐二、久保稔、佐藤良勝、倉田哲也、長谷部光泰
  • Organizer: 第54回日本植物生理学会年会
  • Place of Presentation: 岡山大学(岡山県)
  • Year and Date: 2013-03-21
• [Presentation] VND, NST/SND, SMB-related NAC homologs in Physcomitrella patens (2013)
  • Author(s): Xu, B., Otani, M., Hiwatashi, Y., Yamaguchi, M., Kubo, M., Kurata, T., Kato, K., Hasebe, M., and Demura, T
  • Organizer: In The 54th Annual Meeting of The Japanese Society of Plant Physiologists
  • Place of Presentation: Okayama, Japan
  • Year and Date: 2013-03-21
• [Presentation] Converved gene networks in the seed and beyond. (2012)
  • Author(s): Gomez-Paez, M., Medina, J., Restovic, F., Jordana, X., Kabeya, Y., Ishikawa, M., Hasebe, M., and Vicente-Carbajosa, J.
  • Organizer: In XLVIII Reunion Anual de la Sociedad Argentina de Investigacion Bioquimica y Biologia Molecular organized by the Argentinean Society for Biochemistry and Molecular Biology
  • Place of Presentation: Ciudad de Mendoza, Argentina
  • Year and Date: 2012-10-29
• [Presentation] Epigenome and transcriptome analyses using the histone methyltransferase mutant of Physcomitrella patens (2012)
  • Author(s): Ishikawa, T., Tamada, Y., Hiwatashi, Y., Thompson, K., Ohshima, M., Kurata, T., Nishiyama, T., and Hasebe, M.
  • Organizer: In The 53rd Annual Meeting of The Japanese Society of Plant Physiologist
  • Place of Presentation: Kyoto, Japan
  • Year and Date: 2012-03-16
• [Presentation] 植物の進化過程において、ジベレリン 受容システムは既存のGAMYEを制御するため に誕生した (2012)
  • Author(s): 安益公一郎, 日渡祐二, 小嶋美紀子, 榊原 均, 上田(田中)美祢子, 長谷部光泰, and 松 岡信
  • Organizer: In 第53回日本植物生理学会年会
  • Place of Presentation: 京都産業大学
  • Year and Date: 2012-03-16
• [Presentation] Polycomb repressive complex 2 is required for the maintenance of H3K4me3 at the H3K27me3 target genes in the moss Physcomitrella patens. In (2011)
  • Author(s): Ishikawa, T., Tamada, Y., Hiwatashi, Y., Kurata, T., Nishiyama, T., and Hasebe, M
  • Organizer: 第34回日本分子生物学会年会
  • Place of Presentation: パシフィコ横浜
  • Year and Date: 2011-12-13
• [Presentation] ヒメツリガネゴケ野生型およびH3K27 メチル化酵素欠失株を用いたトランスクリプ トーム・エピゲノム解析 (2011)
  • Author(s): 石川貴章, 玉田洋介, 日渡祐二, 倉田哲 也, 西山智明, and 長谷部光泰
  • Organizer: In 生命情報科学若 手の会第3回研究会
  • Place of Presentation: 基礎生物学研究所
  • Year and Date: 2011-10-30
• [Presentation] 現代進化 生物学の面白さ (2011)
  • Author(s): 長谷部光泰
  • Organizer: In 第13回日本進化学会大会
  • Place of Presentation: 京都大学
  • Year and Date: 2011-07-30
• [Presentation] Origin of Plant Patterns. (2011)
  • Author(s): Hasebe, M.
  • Organizer: A workshop "Evolution of Plant Patterns" organized by Mata Laskowski and Ben Scheres
  • Place of Presentation: Jackson Hall, WY,USA
  • Year and Date: 2011-03-28
• [Presentation] ヒメツリガネゴケポリコー ム遺伝子破壊系統における無限成長・分枝機 構の解析. (2010)
  • Author(s): 日渡祐二,Dawnd, T., and 長谷部光泰
  • Organizer: In 日本植物学会第74回大会
  • Place of Presentation: 中部大学
  • Year and Date: 2010-09-09
• [Presentation] ヒメツリガネゴケLAS遺伝子オーソログは不等分裂を制御し生殖細胞の形成に関与する (2010)
  • Author(s): 馬川直之, 日渡祐二, 長谷部光泰, and 小藤累美子
  • Organizer: In 日本植物学会第74回大会
  • Place of Presentation: 中部大学
  • Year and Date: 2010-09-09
• [Presentation] 植物の系統と発生進化 (2010)
  • Author(s): 長谷部光泰
  • Organizer: In 第12回日本進化学会大会
  • Place of Presentation: 東京工業大学
  • Year and Date: 2010-08-02
• [Presentation] PpAPB genes regulate stem cell characterization in the moss Physcomitrella (2010)
  • Author(s): Aoyama, T., Hiwatashi, Y., Shigyo, M., Hayashi, K., Ito, M., and Hasebe, M
  • Organizer: In Moss 2010
  • Place of Presentation: Sapporo,Japan
  • Year and Date: 2010-07-23
• [Presentation] Regulatory mechanisms of initiation of a sporophyte-like stem cell in Physcomitrella patens CURFY LEAF deletion mutants (2010)
  • Author(s): Hiwatashi, Y., and Hasebe, M
  • Organizer: In Moss 2010
  • Place of Presentation: Sapporo,Japan
  • Year and Date: 2010-07-23
• [Presentation] "Evolution of genome, body plan,and life cycle in land plants"International Conference "New Frontiers in Plant Systematics and Evolution" organized by Ge, S (2010)
  • Author(s): T., and Wen, J., Hasebe, M
  • Organizer: Chinese Academy of Sciences, Beijing
  • Place of Presentation: China
  • Year and Date: 2010-07-09
• [Presentation] Physcomitrella patens INTEGUMENTA/PLETHORA/BABY BOOM orthologs are invoived in stem cell characterizatio (2010)
  • Author(s): Aoyama, T., and Hasebe, M
  • Organizer: In 21st International Conference on Arabidopsis Research
  • Place of Presentation: Yokohama, Japan
  • Year and Date: 2010-06-16
• [Presentation] 日本の全ての植物図鑑は間違っていた。植物科学の今を語る (2010)
  • Author(s): 長谷部光泰
  • Organizer: In 第67回小石川植物園市民セミナー
  • Place of Presentation: 東京大学
  • Year and Date: 2010-05-30
• [Presentation] ヒメツリガネゴケpolycomb repressive complex 2 遺伝子破壊体におけるヒストン H3 メチル化状態のゲノムワイド解析 (2010)
  • Author(s): 石川貴章, 玉田洋介, 日渡祐二, Kari Thompson, 大島真澄, 倉田哲也, 西山智明,and 長谷部光泰
  • Organizer: In 第52回日本植物生理学会年会
  • Place of Presentation: 東北大学
  • Year and Date: 2010-03-20
• [Presentation] ポリコーム抑制複合体2遺伝子PpCLFとPpFIEの遺伝子破壊は1倍体分化細胞を2倍体多能性幹細胞にプログラムする (2009)
  • Author(s): 長谷部光泰, 日渡祐二, 岡野陽介, 青野直樹, 村田隆, 西山智明, 石川貴章, and 久保稔
  • Organizer: In 第32回日本分子生物学会年会
  • Place of Presentation: パシフィコ横浜
  • Year and Date: 2009-12-09
• [Remarks]
  • URL: http://www.nibb.ac.jp/evodevo