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2010 Fiscal Year Final Research Report

The determination of disulfide connectivity and conformation by the SAIL method

Research Project

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Project/Area Number 21770110
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Structural biochemistry
Research InstitutionNagoya University

Principal Investigator

TAKEDA Mitsuhiro  Nagoya University, 理学研究科, 研究員 (90508558)

Project Period (FY) 2009 – 2010
Keywords蛋白質 / NMR
Research Abstract

The determination of disulfide connectivity and conformation in a protein is essential for understanding the structural stability of the protein. However, no method for investigating them has been established. Here, a method for observing cross-bridge NOEs involving two b-protons of different cysteine residues has been developed. In a conventional uniformly isotope-labeled protein, the observation of such a NOE is difficult due to signal overlap and spin diffusion effect. In our approach, a protein whose protons are exclusively deuterated except for the two Cys's β-protons is employed, such that the connectivity and proton-proton distance can readily be determined.

  • Research Products

    (8 results)

All 2011 2010 2009

All Journal Article (4 results) (of which Peer Reviewed: 4 results) Presentation (4 results)

  • [Journal Article] Construction and performance of an NMR tube with a sample cavity formed within magnetic susceptibility-matched glass.2011

    • Author(s)
      Takeda M, Hallenga K, Shigezane M, Waelchli M, Lohr F, Markley JL, Kainosho M.
    • Journal Title

      J.Magn.Reson. 209

      Pages: 167-173

    • Peer Reviewed
  • [Journal Article] Application of SAIL phenylalanine and tyrosine with alternative isotope-labeling patterns for protein structure determination.2010

    • Author(s)
      Takeda M, Ono AM, Terauchi T, Kainosho M.
    • Journal Title

      J.Biomol.NMR 46

      Pages: 45-49

    • Peer Reviewed
  • [Journal Article] Detection of the sulfhydryl groups in proteins with slow hydrogen exchange rates and determination of their proton/deuteron fractionation factors using the deuterium-induced effects on the 13C(beta) NMR signals.2010

    • Author(s)
      Takeda M, Jee J, Terauchi T, Kainosho M.
    • Journal Title

      J.Am.Chem.Soc. 132

      Pages: 6254-6260

    • Peer Reviewed
  • [Journal Article] Hydrogen exchange rate of tyrosine hydroxyl groups in proteins as studied by the deuterium isotope effect on C(zeta) chemical shifts.2009

    • Author(s)
      Takeda M, Jee J, Ono AM, Terauchi T, Kainosho M.
    • Journal Title

      J.Am.Chem.Soc. 131

      Pages: 18556-18562

    • Peer Reviewed
  • [Presentation] 蛋白質側鎖OH/SHの水素交換速度の解析2010

    • Author(s)
      武田光広、Chun-Jiun Yang、JunGoo Jee、小野明、寺内勉、甲斐荘正恒
    • Organizer
      第49回NMR討論会
    • Place of Presentation
      東京
    • Year and Date
      2010-11-15
  • [Presentation] NMR Hydrogen Exchange Study of Tyrosine Hydroxyl and Cysteine Sulfhydryl Groups by Deuterium Isotope Shift Effects2010

    • Author(s)
      Mitsuhiro Takeda, Akira M Ono, Tsutomu Terauchi, JunGoo Jee, Masatsune Kainosho
    • Organizer
      Joint EUROMAR 2010 and 17th ISMAR Conference
    • Place of Presentation
      Florence Italy
    • Year and Date
      2010-07-04
  • [Presentation] SAIL芳香族アミノ酸による蛋白質の構造・動態解析2009

    • Author(s)
      武田光広、甲斐荘正恒
    • Organizer
      第48回NMR討論会
    • Place of Presentation
      福岡
    • Year and Date
      2009-11-10
  • [Presentation] Application of SAIL phenylalanine and tyrosine residues with different isotope labeling patterns for structure2009

    • Author(s)
      Mitsuhiro Takeda, Akira Mei Ono, Tsutomu Terauchi, Masatsune Kainosho
    • Organizer
      Asia-Pacific NMR
    • Place of Presentation
      Jeju Korea
    • Year and Date
      2009-10-25

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Published: 2012-02-13   Modified: 2016-04-21  

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