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2013 Fiscal Year Final Research Report

Chromatin regulation by DNA replication and recombination

Research Project

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Project/Area Number 23570212
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Molecular biology
Research InstitutionOsaka University

Principal Investigator

NAKAGAWA TAKURO  大阪大学, 理学(系)研究科(研究院), 准教授 (20324866)

Research Collaborator MASUKATA Hisao  大阪大学, 大学院理学研究科, 教授 (00199689)
TAKAHASHI Tatsuro  大阪大学, 大学院理学研究科, 助教 (50452420)
ZAFAR Faria  大阪大学, 大学院理学研究科, 博士課程
OKITA Akiko  大阪大学, 大学院理学研究科, 博士課程
ONAKA Atsushi  大阪大学, 大学院理学研究科, 博士課程
SAGAWA Minami  大阪大学, 大学院理学研究科, 修士課程
SU Jie  大阪大学, 大学院理学研究科, 修士課程
TOYOFUKU Naoko  大阪大学, 大学院理学研究科, 修士課程
KATAHIRA Yasuhiro  大阪大学, 大学院理学研究科, 修士課程
INOUE Takahiro  大阪大学, 大学院理学研究科, 修士課程
Project Period (FY) 2011 – 2013
KeywordsDNA複製 / DNA組換え / セントロメア / クロマチン / 分裂酵母
Research Abstract

Chromatin structures affect the pathway choice of DNA recombination. We found that the chromatin structures formed in centromere prevents single-strand annealing (SSA) and crossing over to take place. This centromere-specific regulation of recombination is important to prevent gross chromosomal rearrangement (GCR) in centromere.
Numbers of pre-replicative complexes (preRCs) are assembled on each chromosome in eukaryotes. We found that the formation of preRCs is important not only for DNA replication per se but also for the repair of DNA double-strand breaks (DSBs) and for the construction of chromatin structures in centromere probably through histone acetylation.

  • Research Products

    (31 results)

All 2014 2013 2012 2011 Other

All Journal Article (8 results) (of which Peer Reviewed: 8 results) Presentation (20 results) (of which Invited: 2 results) Book (1 results) Remarks (2 results)

  • [Journal Article] The DNA damage checkpoint pathway promotes extensive resection and nucleotide synthesis to facilitate homologous recombination repair and genome stability in fission yeast2014

    • Author(s)
      Blaikley, E. J., Tinline-Purvis, H., Kasparek, T. R., Marguerat, S., Sarkar, S., Hulme, L., Hussey, S., Wee, B. Y., Deegan, R. S., Walker, C. A., Pai, C. C., Bahler, J., Nakagawa, T., and Humphrey, T. C.
    • Journal Title

      Nucleic Acids Res

      Volume: 42 Pages: 5644-5656

    • DOI

      10.1093/nar/gku190

    • Peer Reviewed
  • [Journal Article] Telomere-binding protein Taz1 controls global replication timing through its localization near late replication origins in fission yeast2012

    • Author(s)
      Tazumi, A., Fukuura, M., Nakato, R., Kishimoto, A., Takenaka, T., Ogawa, S., Song, J. H., Takahashi, T. S., Nakagawa, T., Shirahige, K., and Masukata, H.
    • Journal Title

      Genes Dev

      Volume: 26 Pages: 2050-2062

    • DOI

      10.1101/gad.194282.112

    • Peer Reviewed
  • [Journal Article] Mcm10 plays an essential role in origin DNA unwinding after loading of the CMG components2012

    • Author(s)
      Kanke, M., Kodama, Y., Takahashi, T. S., Nakagawa, T., and Masukata, H.
    • Journal Title

      EMBO J

      Volume: 31 Pages: 2182-2194

    • DOI

      10.1038/emboj.2012.68

    • Peer Reviewed
  • [Journal Article] The prereplication complex recruits XEco2 to chromatin to promote cohesin acetylation in Xenopus egg extracts2012

    • Author(s)
      Higashi, T. L., Ikeda, M., Tanaka, H., Nakagawa, T., Bando, M., Shirahige, K., Kubota, Y., Takisawa, H., Masukata, H., and Takahashi, T. S.
    • Journal Title

      Curr Biol

      Volume: 22 Pages: 977-988

    • DOI

      10.1016/j.cub.2012.04.013

    • Peer Reviewed
  • [Journal Article] DNA polymerization-independent functions of DNA polymerase epsilon in assembly and progression of the replisome in fission yeast2012

    • Author(s)
      Handa, T., Kanke, M., Takahashi, T. S., Nakagawa, T., and Masukata, H.
    • Journal Title

      Mol Biol Cell

      Volume: 23 Pages: 3240-3253

    • DOI

      10.1091/mbc.E12-05-0339

    • Peer Reviewed
  • [Journal Article] Abundance of prereplicative complexes (Pre-RCs) facilitates recombinational repair under replication stress in fission yeast2011

    • Author(s)
      Maki, K., Inoue, T., Onaka, A., Hashizume, H., Somete, N., Kobayashi, Y., Murakami, S., Shigaki, C., Takahashi, T. S., Masukata, H., and Nakagawa, T.
    • Journal Title

      J. Biol. Chem.

      Volume: 286 Pages: 41701-41710

    • DOI

      10.1074/jbc.M111.285619

    • Peer Reviewed
  • [Journal Article] Auxin-inducible protein depletion system in fission yeast2011

    • Author(s)
      Kanke, M., Nishimura, K., Kanemaki, M., Kakimoto, T., Takahashi, T. S., Nakagawa, T., and Masukata, H.
    • Journal Title

      BMC Cell Biol

      Volume: 12 Pages: 8

    • DOI

      10.1186/1471-2121-12-8

    • Peer Reviewed
  • [Journal Article] CDK promotes interactions of Sld3 and Drc1 with Cut5 for initiation of DNA replication in fission yeast2011

    • Author(s)
      Fukuura, M., Nagao, K., Obuse, C., Takahashi, T. S., Nakagawa, T., and Masukata, H.
    • Journal Title

      Mol Biol Cell

      Volume: 22 Pages: 2620-2633

    • DOI

      10.1091/mbc.E10-12-0995

    • Peer Reviewed
  • [Presentation] 相同組換えによるセントロメア領域の染色体再編の抑制2014

    • Author(s)
      中川拓郎
    • Organizer
      公開シンポジウム「インターメアによる染色体制御機構」
    • Place of Presentation
      (東京大学山上会館)
    • Year and Date
      20140108-09
  • [Presentation] セントロメア領域のCENP-SXを介した組換え制御による染色体再編の抑制2013

    • Author(s)
      ザファーファリア、沖田暁子、大仲惇司、蘇傑、高橋達郎、升方久夫、中川拓郎
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      (神戸ポートアイランド)
    • Year and Date
      20131203-06
    • Invited
  • [Presentation] Regulation of the recombination at centromere by CENP-SX2013

    • Author(s)
      Akiko Okita, Faria Zafar, Tatsuro S Takahashi, Hisao Masukata, Takuro Nakagawa.
    • Organizer
      第22回DNA複製・組換え・修復ワークショップ
    • Place of Presentation
      (宮城県仙台市、秋保温泉)
    • Year and Date
      20131120-23
  • [Presentation] CENP-SX/MHF1-2を介したセントロメア領域の染色体再編の抑制2013

    • Author(s)
      中川拓郎
    • Organizer
      国立遺伝学研究所・研究会「染色体DNAの安定維持の分子メカニズム」
    • Place of Presentation
      (静岡県三島、国立遺伝学研究所)
    • Year and Date
      20130927-28
  • [Presentation] キネトコア蛋白質CENP-SXによるセントロメアの維持機構2013

    • Author(s)
      中川拓郎
    • Organizer
      第85回日本遺伝学会大会
    • Place of Presentation
      (慶応大学日吉キャンパス)
    • Year and Date
      20130919-21
    • Invited
  • [Presentation] Centromere integrity is preserved by Rad51-dependent recombination in fission yeast2013

    • Author(s)
      Faria Zafar, Atsushi Onaka, Akiko Okita, Rei Asai, Takeshi Shitanda, Tatsuro Takahashi, Hisao Masukata, Takuro Nakagawa
    • Organizer
      EMBO Conference on Fission Yeast: Pombe 2013
    • Place of Presentation
      (London, UK)
    • Year and Date
      20130624-29
  • [Presentation] Centromere-specific regulation of recombination in fission yeast2013

    • Author(s)
      Akiko Okita, Atsushi Onaka, Yasuhiro Katahira, Tatsuro Takahashi, Hisao Masukata, Takuro Nakagawa.
    • Organizer
      MBO Conference on Fission Yeast: Pombe 2013
    • Place of Presentation
      (London, UK)
    • Year and Date
      20130624-29
  • [Presentation] ヘテロクロマチン構造によるセントロメアにおける相同組換えの制御機構2012

    • Author(s)
      沖田暁子、大仲惇司、片平泰弘、高橋達郎、升方久夫、中川拓郎
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      (福岡国際会議場・マリンメッセ福岡)
    • Year and Date
      20121211-14
  • [Presentation] NA ポリメラーゼα によるセントロメア特異的組換えの制御2012

    • Author(s)
      大仲惇司、片平泰弘、高橋達郎、升方久夫、中川拓郎
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      (福岡国際会議場・マリンメッセ福岡)
    • Year and Date
      20121211-14
  • [Presentation] Effects of chromatin structures on recombination in centromeres of fission yeast2012

    • Author(s)
      Faria Zafar, Takeshi Shitanda, Rei Asai, Tatsuro Takahashi, Hisao Masukata, Takuro Nakagawa
    • Organizer
      The 8th 3R Symposium
    • Place of Presentation
      (兵庫県、淡路夢舞台)
    • Year and Date
      20121125-28
  • [Presentation] Recombination between centromere repeats in fission yeast2012

    • Author(s)
      Akiko Okita, Faria Zafar, Rei Asai, Takeshi Shitanda, Tatsuro Takahashi, Hisao Masukata, Takuro Nakagawa.
    • Organizer
      The 8th 3R Symposium
    • Place of Presentation
      (兵庫県、淡路夢舞台)
    • Year and Date
      20121125-28
  • [Presentation] 分裂酵母セントロメアでの組換え制御機構2012

    • Author(s)
      中川拓郎
    • Organizer
      国立遺伝学研究所・研究会「遺伝情報の安定維持を支える分子メカニズム」
    • Place of Presentation
      (静岡県三島、国立遺伝学研究所)
    • Year and Date
      20121003-04
  • [Presentation] Fボックス因子Pof3によるセントロメアの相同組換えの制御機構2011

    • Author(s)
      片平泰弘、浅井麗伊、四反田武志、高橋達郎、升方久夫、中川拓郎
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      (パシフィコ横浜)
    • Year and Date
      20111213-16
  • [Presentation] 分裂酵母セントロメア領域に於けるDNA組換えの分子機構2011

    • Author(s)
      四反田武志、浅井麗伊、ザファーファリア、井上卓大、片平泰弘、高橋達郎、升方久夫、中川拓郎
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      (パシフィコ横浜)
    • Year and Date
      20111213-16
  • [Presentation] Effects of chromatin structures on recombination in centromeres of fission yeast2011

    • Author(s)
      Faria Zafar, Rei Asai, Takeshi Shitanda, Tatsuro Takahashi, Hisao Masukata, Takuro Nakagawa.
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      (パシフィコ横浜)
    • Year and Date
      20111213-16
  • [Presentation] セントロメアにおける相同組換えの制御機構の解明2011

    • Author(s)
      大仲惇司、片平泰弘、高橋達郎、升方久夫、中川拓郎.
    • Organizer
      第21回DNA複製・組換え・ゲノム安定性制御ワークショップ
    • Place of Presentation
      (福岡県サンピア福岡)
    • Year and Date
      20111025-27
  • [Presentation] 複製前複合体pre-RCの多数形成は組換え修復の後期過程を促進する2011

    • Author(s)
      井上卓大、真木賢太郎、大仲惇司、橋詰紘子、染手那緒子、小林優子、村上成文、志垣智佳子、高橋達郎、升方久夫、中川拓郎
    • Organizer
      第21回DNA複製・組換え・ゲノム安定性制御ワークショップ
    • Place of Presentation
      (福岡県サンピア福岡)
    • Year and Date
      20111025-27
  • [Presentation] セントロメアでの組換えの制御機構2011

    • Author(s)
      中川拓郎
    • Organizer
      国立遺伝学研究所・研究会「ゲノム損傷応答研究会」
    • Place of Presentation
      (静岡県三島、国立遺伝学研究所)
    • Year and Date
      20111014-15
  • [Presentation] Recombination between the centromere repeats in fission yeast2011

    • Author(s)
      Takeshi Shitanda, Rei Asai, Faria Zafar, Takahiro Inoue, Yasuhiro Katahira, Tatsuro S Takahashi, Hisao Masukata, Takuro Nakagawa
    • Organizer
      The 6th International Fission Yeast Meeting
    • Place of Presentation
      (Boston, USA)
    • Year and Date
      20110625-30
  • [Presentation] 酵母でのChIP法実験操作の解説2011

    • Author(s)
      中川拓郎
    • Organizer
      千里ライフサイエンス振興財団、技術講習会「クロマチン免疫沈降」
    • Place of Presentation
      (大阪、千里ライフサイエンスセンター)
    • Year and Date
      2011-09-26
  • [Book] Regulation of Minichromosome Maintenance (MCM) Helicase in Response to Replication Stress. 65-86. In Fundamental Aspects of DNA Replication2011

    • Author(s)
      Zafar, T., and Nakagawa, T.
    • Publisher
      Dr. Jelena Kusic-Tisma, ed. (Rijeka, Croatia : In Tech)
  • [Remarks] 研究室のホームページ

    • URL

      http://www.bio.sci.osaka-u.ac.jp/bio_web/lab_page/masukata/index.html

  • [Remarks] 研究グループのホームページ

    • URL

      http://www.bio.sci.osaka-u.ac.jp/~takuro/science/Welcome.html

URL: 

Published: 2015-07-16  

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