2012 Fiscal Year Final Research Report
Transcriptome Analysis of Schizophrenia
Project/Area Number |
23659563
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Research Category |
Grant-in-Aid for Challenging Exploratory Research
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Allocation Type | Multi-year Fund |
Research Field |
Psychiatric science
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Research Institution | Nagoya University |
Principal Investigator |
OZAKI Norio 名古屋大学, 医学系研究科, 教授 (40281480)
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Co-Investigator(Renkei-kenkyūsha) |
OHNO Kinji 名古屋大学, 大学院・医学系研究科, 教授 (80397455)
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Project Period (FY) |
2011 – 2012
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Keywords | トランスクリプトーム解析 / 統合失調症 / 分子精神医学 / ゲノム医学 / バイオインフォマティックス |
Research Abstract |
Transcriptome analysis of lymphoblastoid cell line derived fromschizophrenic patients and healthy controls was performed to investigate dysregulationof alternative splicing by comparing the profiles observed. We found the subtle differences in gene and exon level analysis between schizophrenic patients and healthy controls. The top hit genes were tested using pathway and hierarchical clustering analysis. In addition we observed a number of regulatory SNPs (expression quantitative trait loci-eQTL) by integrating data from genotype and expression wise analysis. As a result, the genes which expression was affected by the disease status may be associated with molecular mechanisms that contribute to the pathophysiology of schizophrenia.
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[Journal Article] DPP6 as a candidate gene for neuroleptic-induced tardive dyskinesia2013
Author(s)
Tanaka S, Syu A, Ishiguro H, Inada T, Horiuchi Y, Ishikawa M, Koga M, Noguchi E, Ozaki N, Someya T, Kakita A, Takahashi H, Nawa H,Arinami T
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Journal Title
Pharmacogenomics J
Volume: 13(1)
Pages: 27-34
DOI
Peer Reviewed
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[Journal Article] Association of SNPs linked to increased expression of SLC1A1 with schizophrenia2012
Author(s)
Horiuchi Y, Iida S, Koga M, Ishiguro H, Iijima Y, Inada T, Watanabe Y, Someya T, Ujike H, Iwata N, Ozaki N, Kunugi H, Tochigi M, Itokawa M, Arai M, Niizato K, Iritani S, Kakita A, Takahashi H, Nawa H, Arinami T
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Journal Title
Am J Med Genet B Neuropsychiatr Genet
Volume: 159B (1)
Pages: 30-7
DOI
Peer Reviewed
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[Journal Article] Resequencing and Association Analysis of the KALRN and EPHB1 Genes And Their Contribution to Schizophrenia Susceptibility2011
Author(s)
Kushima I, Nakamura Y, Aleksic B, Ikeda M, ItoY, Shiino T, Okochi T, Fukuo Y, Ujike H, SuzukiM, Inada T, Hashimoto R, Takeda M, Kaibuchi K,Iwata N, Ozaki N
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Journal Title
Schizophr Bull
Volume: 38(3)
Pages: 552-560
DOI
Peer Reviewed
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[Journal Article] Loss of Function Studies in Mice and Genetic Association Link Receptor Protein Tyrosine Phosphatase alpha to Schizophrenia2011
Author(s)
Takahashi N, Nielsen KS, Aleksic B, Petersen S,Ikeda M, Kushima I, Vacaresse N, Ujike H, IwataN, Dubreuil V, Mirza N, Sakurai T, Ozaki N,Buxbaum JD, Sap J
Volume
70 (7)
Pages
626-635
DOI
Peer Reviewed
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[Presentation] Schizophrenia associated polymorphism regulates PTPRA transcript expression in lymphoblastoid cell lines2012
Author(s)
Akira Yoshimi, Nagahide Takahashi, Branko Aleksic, Itaru Kushima, Masashi Ikeda, Hiroshi Ujike, Takeshi Sakurai, Joseph D. Buxbaum, Jan Sap, Nakao Iwata, Norio Ozaki
Organizer
WCPG 2012
Place of Presentation
Hamburg, Germany
Year and Date
20121014-18
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