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Functional analysis and development for anti-tumor compounds targeted PRDM14 relating to cancer stemness based on protein-protein interaction

Research Project

Project/Area Number 16H04710
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Tumor therapeutics
Research InstitutionThe University of Tokyo

Principal Investigator

Taniguchi Hiroaki  東京大学, 医科学研究所, 特任研究員 (90563289)

Co-Investigator(Kenkyū-buntansha) 長門石 曉  東京大学, 医科学研究所, 特任准教授 (30550248)
Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥16,900,000 (Direct Cost: ¥13,000,000、Indirect Cost: ¥3,900,000)
Fiscal Year 2018: ¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2017: ¥5,720,000 (Direct Cost: ¥4,400,000、Indirect Cost: ¥1,320,000)
Fiscal Year 2016: ¥7,150,000 (Direct Cost: ¥5,500,000、Indirect Cost: ¥1,650,000)
Keywordsがん幹細胞性 / タンパク質相互作用 / 創薬スクリーニング系 / タンパク質 / 薬学 / 遺伝子 / トランスレーショナルリサーチ / 蛋白質 / 癌
Outline of Final Research Achievements

Inhibiting PRDM14 expression in breast and pancreatic cancers has been reported to reduce cancer stem-like phenotypes, which are associated with aggressive tumor properties. To develop a pharmaceutical treatment, the mechanism and interacting partners of PRDM14 need to be clarified. We obtained several candidates that were pulled down with PRDM14 in TNBC cells and identified them by mass spectrometry. Two candidates, GRP78 and HSP90a,were confirmed by immunoprecipitation assay. Surface plasmon resonance analysis using GST-PRDM14 showed that these two proteins directly interacted with PRDM14 and that the interactions required the C-terminal region of PRDM14. We also confirmed the interactions in living cells by NanoLuc luciferase-based bioluminescence resonance energy transfer (NanoBRET) assay. We also found out other candidates interacted with PRDM14 via SPR assay and NanoBRET assay, then we started to construct screening system for new drug discovery.

Academic Significance and Societal Importance of the Research Achievements

PRDM14分子は正常細胞に発現がなく、ES細胞と腫瘍細胞に発現が限られる。一方、相互作用を呈するタンパク質には多くの分子標的となるoncogeneが含まれるものの、それらは正常細胞にも発現があるため、その発現を抑制することは副作用に繋がる。PRDM14との相互作用でがん細胞の幹細胞性が担われている可能性が高いため、その抑止により分化誘導の可能性が生じ、抗がん剤の感受性も高くなると考えられる。更には、すでに核酸創薬でPRDM14の発現を抑えることで、乳がん、膵がんに効果があることが判明しているため、本研究により導出される低分子化合物はこれらの疾患に有効な可能性が高い。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Annual Research Report
  • 2016 Annual Research Report
  • Research Products

    (38 results)

All 2019 2018 2017 2016

All Journal Article (16 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 16 results,  Open Access: 7 results,  Acknowledgement Compliant: 1 results) Presentation (20 results) (of which Int'l Joint Research: 3 results,  Invited: 1 results) Book (2 results)

  • [Journal Article] Phospholipid Membrane Fluidity Alters Ligand Binding Activity of a G Protein-Coupled Receptor by Shifting the Conformational Equilibrium.2019

    • Author(s)
      Yoshida K, Nagatoishi S, Kuroda D, Suzuki N, Murata T, Tsumoto K.
    • Journal Title

      Biochemistry

      Volume: 58(6) Issue: 6 Pages: 504-508

    • DOI

      10.1021/acs.biochem.8b01194

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] PRDM14 is overexpressed in chronic pancreatitis prior to pancreatic cancer.2018

    • Author(s)
      Chiharu Moriya, Kohzoh Imai, Taniguchi Hiroaki.
    • Journal Title

      FEBS Open Bio

      Volume: 8(10) Issue: 10 Pages: 1733-1741

    • DOI

      10.1002/2211-5463.12519

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] PRDM14, a Zinc Finger Protein, Regulates Cancer Stemness2018

    • Author(s)
      Taniguchi Hiroaki, Imai Kohzoh.
    • Journal Title

      Methods Mol Biol.

      Volume: 1867 Pages: 3-13

    • DOI

      10.1007/978-1-4939-8799-3_1

    • ISBN
      9781493987986, 9781493987993
    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A combination of 19 F NMR and surface plasmon resonance for site-specific hit selection and validation of fragment molecules that bind to the ATP-binding site of a kinase2018

    • Author(s)
      Nagatoishi S, Yamaguchi S, Katoh E, Kajita K, Yokotagawa T, Kanai S, Furuya T, Tsumoto K.
    • Journal Title

      Bioorganic & Medicinal Chemistry

      Volume: 26 Issue: 8 Pages: 1929-1938

    • DOI

      10.1016/j.bmc.2018.02.041

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Inhibition of homophilic dimerization and disruption of cell adhesion by P-cadherin-specific small molecules from SPR-based assays2018

    • Author(s)
      Senoo A, Nagatoishi S, Moberg A, Babol LN, Mitani T, Tashima T, Kudo S, Tsumoto K.
    • Journal Title

      Chemical Communications

      Volume: 54 Issue: 42 Pages: 5350-5353

    • DOI

      10.1039/c8cc01964a

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Discovery and Optimization of Inhibitors of the Parkinson’s Disease Associated Protein DJ-12018

    • Author(s)
      Tashiro Shinya、Caaveiro Jose M. M.、Nakakido Makoto、Tanabe Aki、Nagatoishi Satoru、Tamura Yasushi、Matsuda Noriyuki、Liu Dali、Hoang Quyen Q.、Tsumoto Kouhei
    • Journal Title

      ACS Chemical Biology

      Volume: 13 Issue: 9 Pages: 2783-2793

    • DOI

      10.1021/acschembio.8b00701

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] PRDM14 directly interacts with heat shock proteins HSP90α and glucose-regulated protein 78.2018

    • Author(s)
      Moriya C, Taniguchi H, Nagatoishi S, Igarashi H, Tsumoto K, Imai K
    • Journal Title

      Cancer Sci.

      Volume: 109 Issue: 2 Pages: 373-383

    • DOI

      10.1111/cas.13458

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Inhibition of PRDM14 expression in pancreatic cancer suppresses cancer stem-like properties and liver metastasis in mice2017

    • Author(s)
      C. Moriya, H. Taniguchi, K. Miyata, N. Nishiyama, K. Kataoka, K. Imai
    • Journal Title

      Carcinogenesis

      Volume: 38 Issue: 6 Pages: 638-648

    • DOI

      10.1093/carcin/bgx040

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Silencing PRDM14 expression by an innovative RNAi therapy inhibits stemness, tumorigenicity, and metastasis of breast cancer2017

    • Author(s)
      H. Taniguchi, D. Hoshino, C. Moriya, H. Zembutsu, N. Nishiyama, H. Yamamoto, K. Kataoka, K. Imai
    • Journal Title

      Oncotarget

      Volume: 8 Issue: 29 Pages: 46856-46874

    • DOI

      10.18632/oncotarget.16776

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Thermodynamic analyses of amino acid residues at the interface of an antibody B2212A and its antigen roundabout homolog 1.2017

    • Author(s)
      Yui A, Akiba H, Kudo S, Nakakido M, Nagatoishi S and Tsumoto K
    • Journal Title

      J. Biochem.

      Volume: 162 Pages: 255-258

    • DOI

      10.1093/jb/mvx050

    • NAID

      40021380511

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Biophysical characterization of the interaction between heme and proteins responsible for heme transfer in Streptococcus pyogenes.2017

    • Author(s)
      Hoshino M, Nakakido M, Nagatoishi S, Aikawa C, Nakagawa I, Tsumoto K.
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 493 Issue: 2 Pages: 1109-1114

    • DOI

      10.1016/j.bbrc.2017.09.055

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Structure of the triose-phosphate/phosphate translocator reveals the basis of substrate specificity.2017

    • Author(s)
      Lee Y, Nishizawa T, Takemoto M, Kumazaki K, Yamashita K, Hirata K, Minoda A, Nagatoishi S, Tsumoto K, Ishitani R and Nureki O.
    • Journal Title

      Nature Plants.

      Volume: 3 Issue: 10 Pages: 825-832

    • DOI

      10.1038/s41477-017-0022-8

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Structural basis for binding and transfer of heme in bacterial heme-acquisition systems2017

    • Author(s)
      Naoe Youichi、Nakamura Nozomi、Rahman Md. Mahfuzur、Tosha Takehiko、Nagatoishi Satoru、Tsumoto Kouhei、Shiro Yoshitsugu、Sugimoto Hiroshi
    • Journal Title

      Proteins: Structure, Function, and Bioinformatics

      Volume: 85 Issue: 12 Pages: 2217-2230

    • DOI

      10.1002/prot.25386

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Structural basis for amino-acid export by DMT superfamily transporter YddG2016

    • Author(s)
      H. Tsuchiya, S. Doki, M. Takemoto, T. Ikuta, T. Higuchi, K. Fukui, Y. Usuda, E. Tabuchi, S. Nagatoishi, K. Tsumoto, T. Nishizawa, K. Ito, N. Dohmae, R. Ishitani and O. Nureki
    • Journal Title

      Nature

      Volume: 534 Issue: 7607 Pages: 417-420

    • DOI

      10.1038/nature17991

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Mitochonic acid 5 binds mitochondria and ameliorates renal tubular and cardiac myocyte damage2016

    • Author(s)
      Suzuki T, Kanno SI, Abe T. et al
    • Journal Title

      J Am Soc Nephrol.

      Volume: 27 Issue: 7 Pages: 1925

    • DOI

      10.1681/asn.2015060623

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Cancer Stem Cells in Human Gastrointestinal Cancer.2016

    • Author(s)
      Taniguchi H, Moriya C, Igarashi H, Saitoh A, Yamamoto H, Adachi Y, Imai K.
    • Journal Title

      Cancer Sci

      Volume: 107 Issue: 11 Pages: 1556-1562

    • DOI

      10.1111/cas.13069

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] PRDM14 silencing by siRNA combined with an innovative nanoparticle reduced breast tumor formation and metastasis in vivo.2018

    • Author(s)
      Taniguchi H, Moriya C, Akinaga S, Kataoka K, and Imai K.
    • Organizer
      AACR Annual Meeting 2018
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 革新的ナノマシンとキメラ型siRNAによる悪性腫瘍治療法: 基礎研究から研究開発まで2018

    • Author(s)
      谷口博昭
    • Organizer
      第27回日本がん転移学術集会・総会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] 乳がん細胞株においてPRDM14はヒートショック蛋白HSP90αとGRP78と直接的に相互作用する2018

    • Author(s)
      谷口博昭、森谷千春、今井浩三
    • Organizer
      第76回日本癌学会学術総会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 天然変性タンパク質のフラグメント化によるタンパク質間相互作用阻害リガンド探索2018

    • Author(s)
      長門石曉、津本浩平
    • Organizer
      第12回バイオ関連化学シンポジウム
    • Related Report
      2018 Annual Research Report
  • [Presentation] 蛋白質相互作用の物理化学的解析と次世代創薬2018

    • Author(s)
      長門石曉、津本浩平
    • Organizer
      第56回生物物理学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 細胞内の蛋白質間相互作用を制御する物理化学的リガンド探索2018

    • Author(s)
      長門石曉、津本浩平
    • Organizer
      第91回日本生化学会大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 転写調節因子PRDM14の天然変性領域とEED間における物理化学的相互作用解析2018

    • Author(s)
      大西 亮輔、長門石 曉、谷口 博昭、津本 浩平
    • Organizer
      第41回日本分子生物学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 膵臓がんの癌幹細胞様形質を調節するPRDM14は慢性膵炎によって発現誘導される2017

    • Author(s)
      森谷千春、谷口博昭、今井浩三
    • Organizer
      第76回 日本癌学会学術総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 乳がん細胞株におけるPRDM14分子による遺伝子発現のエピジェネテックな制御2017

    • Author(s)
      谷口博昭、森谷千春、山本博幸、今井浩三
    • Organizer
      第76回 日本癌学会学術総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 癌幹細胞様形質に関わるPRDM14を標的としたsiRNA投与によるすい臓癌細胞株の皮下腫瘍・肝転移抑制効果2017

    • Author(s)
      森谷千春、谷口博昭、今井浩三
    • Organizer
      第26回 日本がん転移学術集会・総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 遺伝子改変マウスによる転写因子Prdm14の分子標的としての有効性評価2017

    • Author(s)
      谷口博昭、森谷千春、山本博幸、今井浩三
    • Organizer
      第26回 日本がん転移学術集会・総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 物理化学的アプローチによる蛋白質間相互作用阻害剤の探索2017

    • Author(s)
      長門石曉、津本浩平
    • Organizer
      第65回 質量分析総合討論会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 熱分析から低分子薬剤の探索・設計に挑む2017

    • Author(s)
      長門石曉、津本浩平、Caaveiro Jose
    • Organizer
      第30回 九州分析化学若手の会 春の講演会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Thermodynamic elucidation of binding process for protein-ligand interactions to propose a drug design2017

    • Author(s)
      長門石曉、津本浩平
    • Organizer
      第55回 日本生物物理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 低分子創薬の技術開発における物理化学バリデーション2017

    • Author(s)
      長門石曉、津本浩平
    • Organizer
      第30回 バイオメディカル分析科学シンポジウム
    • Related Report
      2017 Annual Research Report
  • [Presentation] PRDM14発現抑制による乳腺腫瘍の形成・転移の抑制とPRDM14新規腫瘍マーカーとしての可能性2016

    • Author(s)
      谷口博昭、森谷千春、山本博幸、今井浩三
    • Organizer
      第75回 日本癌学会学術総会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2016-10-07
    • Related Report
      2016 Annual Research Report
  • [Presentation] 転写因子Xは大腸癌の幹細胞性を誘導し悪質形質を促進する2016

    • Author(s)
      五十嵐央祥、谷口博昭、森谷千春、斎藤杏里
    • Organizer
      第75回 日本癌学会学術総会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2016-10-06
    • Related Report
      2016 Annual Research Report
  • [Presentation] Calorimetric characterization of the interaction between an intrinsically disordered protein YB-1 and nucleic acids.2016

    • Author(s)
      Satoru Nagatoishi, Tsumoto Kouhei
    • Organizer
      CALCON 2016
    • Place of Presentation
      Hawaii, USA
    • Year and Date
      2016-08-02
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] SPR and ITC-based small-molecule screening to find inhibitors of protein-protein interactions.2016

    • Author(s)
      Satoru Nagatoishi, Tsumoto Kouhei
    • Organizer
      Developments in Protein Interaction Analysis 2016
    • Place of Presentation
      Berlin, Germany
    • Year and Date
      2016-06-13
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Biophysical approach to find the inhibitors of CapF and ERK2 enzyme in FBDD.2016

    • Author(s)
      Satoru Nagatoishi, Tsumoto Kouhei
    • Organizer
      JCUP VII
    • Place of Presentation
      大手町サンスカイルーム, 東京
    • Year and Date
      2016-05-16
    • Related Report
      2016 Annual Research Report
  • [Book] CSJカレントビュー 医療・診断・創薬の化学 医療応用のための物理化学2017

    • Author(s)
      津本浩平、長門石曉
    • Total Pages
      6
    • Publisher
      化学同人
    • ISBN
      9784759813845
    • Related Report
      2017 Annual Research Report
  • [Book] 生体分子化学 8章 酵素2017

    • Author(s)
      長門石曉、津本浩平(分担執筆)
    • Total Pages
      27
    • Publisher
      講談社
    • Related Report
      2017 Annual Research Report

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Published: 2016-04-21   Modified: 2022-12-28  

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