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Proteomic analysis of EGF receptor-mediated signaling

Research Project

Project/Area Number 19370041
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Structural biochemistry
Research InstitutionThe University of Tokushima

Principal Investigator

TANIGUCHI Hisaaki  The University of Tokushima, 疾患酵素学研究センター, 教授 (10257636)

Co-Investigator(Kenkyū-buntansha) KONISHI Hiroaki  徳島大学, 疾患酵素学研究センター, 准教授 (40252811)
FUJIWARA Kazuko  徳島大学, 疾患酵素学研究センター, 准教授 (20108880)
IKEDA Kazuko  徳島大学, 疾患酵素学研究センター, 助教 (10108863)
KOSAKO Hidetaka  徳島大学, 疾患酵素学研究センター, 准教授 (10291171)
Project Period (FY) 2007 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥18,200,000 (Direct Cost: ¥14,000,000、Indirect Cost: ¥4,200,000)
Fiscal Year 2009: ¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2008: ¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2007: ¥7,800,000 (Direct Cost: ¥6,000,000、Indirect Cost: ¥1,800,000)
Keywordsタンパク質 / プロテオーム / バイオテクノロジー / シグナル伝達 / 分析科学 / 蛋白質
Research Abstract

Four novel proteins identified by the phosphoproteomic analysis of the EGF receptor mediated signaling pathways were studied for their physiological functions. The proteins include Ymer protein, CFBP, CLPABP (Caldiolipine and Phosphatidic Acid Binding Protein) and GAREM (Grb2-associated and regulator of Erk/MAPK). The posttranslational modifications such as phosphorylation and ubiquitination were analyzed for their regulatory roles in the EGF receptor signaling.

Report

(4 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • 2007 Annual Research Report
  • Research Products

    (54 results)

All 2010 2009 2008 2007 Other

All Journal Article (23 results) (of which Peer Reviewed: 22 results) Presentation (28 results) Book (1 results) Remarks (1 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] Phosphoproteomics reveals new ERK MAP kinase targets and links ERK to nucleoporin-mediated nuclear transport.2009

    • Author(s)
      Kosako, H., Yamaguchi, N., Aranami, C., Ushiyama, M., Kose, S., Imamoto, N., Taniguchi, H., Nishida, E., Hattori, S.
    • Journal Title

      Nature Struct. Mol. Biol. 16

      Pages: 1026-1035

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Mitotic regulation of the stability of microtubule plus-end tracking protein EB3 by ubiquitin ligase SIAH-1 and Aurora mitotic kinases2009

    • Author(s)
      Ban, R., Matsuzaki, H., Akashi, T., Sakashita, G., Taniguchi, H., Park, S, Y. Tanaka, H., Furukawa, K., Urano, T.
    • Journal Title

      J. Biol. Chem. 284

      Pages: 28367-28381

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] a novel adaptor protein for growth factor receptor-bound protein 2, contributes to cellular transformation through the activation of extracellular signal-regulated kinase signaling.2009

    • Author(s)
      Tashiro K, Tsunematsu T, Okubo H, Ohta T, Sano E, Yamauchi E, Taniguchi H, Konishi H. GAREM
    • Journal Title

      J. Biol. Chem. 284

      Pages: 20206-20214

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Comprehensive egg-coat proteome of an ascidian Ciona intestinalis reveals gamete recognition molecules involved in self-sterility.2009

    • Author(s)
      Yamada, L., Saito, T., Taniguchi, H., Sawada, H., Harada, Y.
    • Journal Title

      J. Biol. Chem. 284

      Pages: 9402-9410

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Comprehensive egg-coat proteome of an ascidian Ciona intestinalis reveals gamete recognition molecules involved in self-sterility.2009

    • Author(s)
      Yamada, L.
    • Journal Title

      J.Biol.Chem., 284

      Pages: 9402-9410

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] GAREM, a novel adaptor protein for growth factor receptor-bound protein 2, contributes to cellular transformation through the activation of extracellular signal-regulated kinase signaling.2009

    • Author(s)
      Tashiro K.
    • Journal Title

      J.Biol.Chem. 284

      Pages: 20206-20214

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mitotic regulation of the stability of microtubule plus-end tracking protein EB3 by ubiquitin ligase SIAH-1 and Aurora mitotic kinases2009

    • Author(s)
      Ban, R.
    • Journal Title

      J.Biol.Chem 284

      Pages: 28367-28381

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Phosphoproteomics reveals new ERK MAP kinase targets and links ERK to nucleoporin-mediated nuclear transport.2009

    • Author(s)
      Kosako, H
    • Journal Title

      Nature Struct.Mol.Biol. 16

      Pages: 1026-1035

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] An a posteriori calibration method for improving protein identification accuracy in proteomics using electrospray ionization time-of-flight tandem mass spectrometry.2008

    • Author(s)
      Ishino Y., Taniguchi, H
    • Journal Title

      Rapid Commun. Mass Spectrom. 22

      Pages: 1335-1338

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Contribution of peroxisome-specific isoform of Lon protease in sorting PTS1 proteins to peroxisomes.2008

    • Author(s)
      Omi, S., Nakata, R., Okamura-Ikeda, K., Konishi, H., Taniguchi, H.
    • Journal Title

      J. Biochem 143

      Pages: 649-660

    • NAID

      10024909907

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Mechanism of Self-Sterility in a Hermaphroditic Chordate.2008

    • Author(s)
      Harada, Y., Takagaki, Y., Sunagawa, M., Saito, T., Yamada, L., Taniguchi, H., Shoguchi, E., Sawada, H.
    • Journal Title

      Science 320

      Pages: 548-550

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Novel tyrosine phosphorylated and cardiolipin-binding protein CLPABP functions as mitochondrial RNA granule.2008

    • Author(s)
      Sano, E., Shono, S., Tashiro, K., Konishi, H., Yamauchi, E., Taniguchi, H.
    • Journal Title

      Biochim Biophys Acta Mol. Cell. Res. 1783

      Pages: 1036-1047

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] An a posteriori calibration method for improving protein identification accuracy in proteomics using electrospray ionization time-of-flight tandem mass spectrometry.2008

    • Author(s)
      Ishino Y.
    • Journal Title

      Rapid Commun Mass Spectrom. 22

      Pages: 1335-1338

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mechanism of self-sterility in a hermaphroditic chordate.2008

    • Author(s)
      Harada Y.
    • Journal Title

      Science. 320

      Pages: 548-550

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Contribution of Peroxisome-specific Isoform of Lon Protease in Sorting PTS1 Proteins to Peroxisomes.2008

    • Author(s)
      Omi s.
    • Journal Title

      J Biochem. 143

      Pages: 649-660

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Novel tyrosine phosphorylated and cardiolipin-binding protein CLPABP functions as mitochondrial RNA granule.2008

    • Author(s)
      Sano E.
    • Journal Title

      Biochim Biophys Acta. Mol. Cell. Res. 1783

      Pages: 1036-1047

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mass spectrometry-based prokaryote gene annotation.2007

    • Author(s)
      Ishino, Y., Okada, H., Ikeuchi, M., Taniguchi, H.
    • Journal Title

      Proteomics 22

      Pages: 4053-4065

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Crystal Structure of Bovine Lipoyltransferase in Complex with Lipoyl-AMP.2007

    • Author(s)
      Fujiwara, K., Hosaka, H., Matsuda, M., Okamura-Ikeda, K., Motokawa, Y., Suzuki, M., Nakagawa, A., Taniguchi, H.
    • Journal Title

      J Mol Biol 371

      Pages: 222-234

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] PGC7/Stella protects against DNA demethylation in early embryogenesis.2007

    • Author(s)
      Nakamura, T., Arai, Y., Umehara, H., Masuhara, M., Kimura, T., Taniguchi, H., Sekimoto, T., Ikawa, M., Yoneda, Y., Okabe, M., Tanaka, S., Shiota, K., Nakano, T.
    • Journal Title

      ature Cell Biology 9

      Pages: 64-71

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] タンパク質間相互作用におけるアシル化の役割2007

    • Author(s)
      谷口寿
    • Journal Title

      生体の科学 58(5)

      Pages: 360-363

    • Related Report
      2009 Final Research Report
  • [Journal Article] Crystal structure of bovine lipoyltransferase in complex with lipoyl-AMP2007

    • Author(s)
      Fujiwara K.
    • Journal Title

      J Mol Biol 371

      Pages: 222-234

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] PGC7/Stella protects against DNA demethylation in early embryogenesis2007

    • Author(s)
      Nakamura T.
    • Journal Title

      Nat Cell Biol 9

      Pages: 64-71

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mass spectrometry based prokaryote gene annotation2007

    • Author(s)
      Ishino Y.
    • Journal Title

      Proteomics 22

      Pages: 4053-4065

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Presentation] Western blot-like presentation of gel-enhanced LC/MS data and software-based detection of protein modifications2010

    • Author(s)
      吉沢明康
    • Organizer
      RECOMBサテライトミーティング
    • Place of Presentation
      アトキンソンホール、UCSD、サンディエゴ、USA
    • Year and Date
      2010-03-28
    • Related Report
      2009 Annual Research Report
  • [Presentation] Annotation of prokaryote genomes using large-scale proteomic data2010

    • Author(s)
      谷口寿章
    • Organizer
      RECOMBサテライトミーティング
    • Place of Presentation
      アトキンソンホール、UCSD、サンディエゴ、USA
    • Year and Date
      2010-03-27
    • Related Report
      2009 Annual Research Report
  • [Presentation] ProteoFiT : a bundle of VBA macros for parsing, filtering and analyzing Mascot database search results for large-scale proteomics.2010

    • Author(s)
      谷口貴子
    • Organizer
      RECOMBサテライトミーティング
    • Place of Presentation
      アトキンソンホール、UCSD、サンディエゴ、USA
    • Year and Date
      2010-03-27
    • Related Report
      2009 Annual Research Report
  • [Presentation] a bundle of VBA macros for parsing, filtering and analyzing Mascot database search results for large-scale proteomics.2010

    • Author(s)
      谷口貴子、谷口寿章ProteoFiT
    • Organizer
      RECOM Satellite Meeting on Computational Proteomics.
    • Place of Presentation
      UCSD, San Diego, USA
    • Related Report
      2009 Final Research Report
  • [Presentation] Annotation of prokaryote genomes using large-scale proteomic data.2010

    • Author(s)
      谷口寿章
    • Organizer
      RECOM Satellite Meeting on Computational Proteomics
    • Place of Presentation
      UCSD, San Diego, USA
    • Related Report
      2009 Final Research Report
  • [Presentation] Western blot-like presentation of gel-enhanced LC/MS data and software-based detection of protein modifications.2010

    • Author(s)
      吉沢明康、山田力志、谷口寿章
    • Organizer
      RECOM Satellite Meeting on Computational Proteomics.
    • Place of Presentation
      UCSD, San Diego, USA
    • Related Report
      2009 Final Research Report
  • [Presentation] Phosphorylation of nuclear pore complex proteins by ERK MAP kinase regulates interaction with transport receptors.2010

    • Author(s)
      小迫英尊
    • Organizer
      ASCB 49th Annual Meeting
    • Place of Presentation
      San Diego, USA
    • Related Report
      2009 Final Research Report
  • [Presentation] Phosphorylation of nuclear pore complex proteins by ERK MAP kinase regulates interaction with transport receotors.2009

    • Author(s)
      小迫英尊
    • Organizer
      2009 ASCB Annual Meeting
    • Place of Presentation
      コンベンションセンター(サンディェゴ)
    • Year and Date
      2009-12-06
    • Related Report
      2009 Annual Research Report
  • [Presentation] Ascidian Adult Body Map: A proteomic view of adult ascidian tissues.2009

    • Author(s)
      吉沢明康、山田力志、谷口寿章
    • Organizer
      The 5th International Tunicate Meeting
    • Place of Presentation
      Naha, Okinawa
    • Year and Date
      2009-06-22
    • Related Report
      2009 Final Research Report
  • [Presentation] Global protein profiling of ascidian C. intestinalis: toward the comprehensive understanding at the protein level2009

    • Author(s)
      山田力志、谷口寿章
    • Organizer
      The 5th International Tunicate Meeting
    • Place of Presentation
      Naha, Okinawa
    • Year and Date
      2009-06-22
    • Related Report
      2009 Final Research Report
  • [Presentation] Global protein profiling of ascidian C.intestinalis : toward the comprehensive understanding at the protein level2009

    • Author(s)
      山田力志
    • Organizer
      The 5^<th> International Tunicate Meeting
    • Place of Presentation
      沖縄産業支援センター
    • Year and Date
      2009-06-22
    • Related Report
      2009 Annual Research Report
  • [Presentation] Ascidian Adult Body Map : A proteomic view of adult ascidian tissues2009

    • Author(s)
      吉沢明康
    • Organizer
      The 5^<th> International Tunicate Meeting
    • Place of Presentation
      沖縄産業支援センター
    • Year and Date
      2009-06-22
    • Related Report
      2009 Annual Research Report
  • [Presentation] プロテオミクスによる細胞生物学へのアプローチ日本細胞生物学会大会2009

    • Author(s)
      谷口寿章
    • Place of Presentation
      名古屋
    • Year and Date
      2009-06-04
    • Related Report
      2009 Final Research Report
  • [Presentation] プロテオミクスによる細胞生物学へのアプローチ2009

    • Author(s)
      谷口寿章
    • Organizer
      日本細胞生物学会大会
    • Place of Presentation
      名古屋国際会議場
    • Year and Date
      2009-06-04
    • Related Report
      2009 Annual Research Report
  • [Presentation] Ascidian Adult Body Map:質量分析によるホヤ・プロテオーム・データベースの構築、日本分子生物学会2009

    • Author(s)
      吉沢明康、山田力志、谷口寿章
    • Organizer
      第9回春季シンポジウム
    • Place of Presentation
      宮崎
    • Year and Date
      2009-05-11
    • Related Report
      2009 Final Research Report
  • [Presentation] Ascidian Adult Body Map : 質量分析によるホヤ・プロテオーム・データベースの構築2009

    • Author(s)
      吉沢明康
    • Organizer
      日本分子生物学会 第9回春季シンポジウム
    • Place of Presentation
      シーガイヤワールドコンベンションセンター・サミット
    • Year and Date
      2009-05-11
    • Related Report
      2009 Annual Research Report
  • [Presentation] プロテオミクスによるリンパ腫特異的血清マーカーの探索BMB20082008

    • Author(s)
      庄野繁一、谷口貴子、木戸慎介、阿倍正博、松本俊夫、谷口寿章
    • Place of Presentation
      神戸
    • Year and Date
      2008-12-12
    • Related Report
      2009 Final Research Report
  • [Presentation] プロテオミクスによるリンパ腫特異的血清マーカーの探索2008

    • Author(s)
      庄野 繁一
    • Organizer
      第31回日本分子生物学会年会・第81回日本生化学会大会・合同大会
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2008-12-12
    • Related Report
      2008 Annual Research Report
  • [Presentation] グリシン開裂酵素系T-Hタンパク質複合体の結晶構造解析と反応機構BMB20082008

    • Author(s)
      池田和子, 保坂晴美, 真板宣夫, 藤原和子, 中川敦史, 本川雄太郎, 谷口寿章
    • Place of Presentation
      神戸
    • Year and Date
      2008-12-09
    • Related Report
      2009 Final Research Report
  • [Presentation] 大腸菌lipoate-protein ligase Aによる2段階反応の構造的基盤BMB20082008

    • Author(s)
      藤原和子, 保坂晴美, 池田和子, 真板宣夫, 本川雄太郎, 中川敦史, 谷口寿章
    • Place of Presentation
      神戸
    • Year and Date
      2008-12-09
    • Related Report
      2009 Final Research Report
  • [Presentation] 大腸菌lipoate-protein ligase Aによる2段階反応の構造的基盤2008

    • Author(s)
      藤原 和子
    • Organizer
      第31回日本分子生物学会年会・第81回日本生化学会大会・合同大会
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2008-12-09
    • Related Report
      2008 Annual Research Report
  • [Presentation] グリシン開裂酵素系T-Hタンパク質複合体の結晶構造解析と反応機構2008

    • Author(s)
      池田 和子
    • Organizer
      第31回日本分子生物学会年会・第81回日本生化学会大会・合同大会
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2008-12-09
    • Related Report
      2008 Annual Research Report
  • [Presentation] 質量分析を基盤とするプロテオミクスの医学・生物学研究への応用2008

    • Author(s)
      谷口寿章
    • Organizer
      第56回質量分析総合討論会
    • Place of Presentation
      つくば
    • Year and Date
      2008-05-15
    • Related Report
      2009 Final Research Report
  • [Presentation] 質量分析を基盤とするプロテオミクスの医学・生物学研究への応用2008

    • Author(s)
      谷口 寿章
    • Organizer
      第56回質量分析総合討論会
    • Place of Presentation
      つくば国際会議場エポカル
    • Year and Date
      2008-05-15
    • Related Report
      2008 Annual Research Report
  • [Presentation] グリシン開裂酵素系T-Hタンパク質複合体の結晶構造解析2007

    • Author(s)
      池田 和子
    • Organizer
      第30回日本分子生物学会・第80回日本生化学会合同大会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2007-12-14
    • Related Report
      2007 Annual Research Report
  • [Presentation] X線結晶構造解析によるリポ酸転移酵素の触媒機構の解明2007

    • Author(s)
      藤原 和子
    • Organizer
      第30回日本分子生物学会・第80回日本生化学会合同大会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2007-12-11
    • Related Report
      2007 Annual Research Report
  • [Presentation] 脂肪細胞分泌タンパク質のプロテオーム解析による新規アディポサイトカインの探索2007

    • Author(s)
      奥田 祐子
    • Organizer
      第28回日本肥満学会
    • Place of Presentation
      都市センターホテル
    • Year and Date
      2007-10-20
    • Related Report
      2007 Annual Research Report
  • [Presentation] Secretome Analysis of Human Adipocytes Obtained from Visceral and Subcutaneous Adipose Tissues2007

    • Author(s)
      Yuko Okuda
    • Organizer
      Hupo 6th ANNUAL WORLD CONGRESS, SEOUL 2007
    • Place of Presentation
      COEX
    • Year and Date
      2007-10-09
    • Related Report
      2007 Annual Research Report
  • [Book] 「プロテオミクスと病態解析」図説分子病態学第4版2008

    • Author(s)
      谷口寿章, 一瀬白帝、鈴木宏治(共編)
    • Publisher
      中外医学社刊
    • Related Report
      2009 Final Research Report
  • [Remarks]

    • URL

      http://www.ier.tokushima-u.ac.jp/

    • Related Report
      2009 Final Research Report
  • [Patent(Industrial Property Rights)] 生理活性物質と相互作用する物質の効率的スクリーニング方法2007

    • Inventor(s)
      谷口 寿章, 他
    • Industrial Property Rights Holder
      徳島大学, 他
    • Filing Date
      2007-08-28
    • Related Report
      2007 Annual Research Report

URL: 

Published: 2007-04-01   Modified: 2016-04-21  

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