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Genome analyses of nucleus and mitochondria in the dinoflagellate Noctiluca scintillans

Research Project

Project/Area Number 19580203
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field General fisheries
Research InstitutionKanazawa University

Principal Investigator

ENDOH Hiroshi  Kanazawa University, 自然システム学系, 准教授 (20272932)

Project Period (FY) 2007 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2010: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2009: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2008: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2007: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Keywords進化 / 原生生物 / アルベオラータ / 渦鞭毛虫 / 核ゲノム / ミトコンドリアゲノム / ゲノム / 核 / ミトコンドリア / 赤潮 / 繊毛虫 / 核分化
Research Abstract

Genome analyses of nucleus and mitochondria in ancestral dinoflagellates were carried out. Phylogenetic analyses using 2 available protein-coding genes showed that Noctiluca synthillans is the next earliest branch after Oxyrrhis marina. On the other hand, mitochondrial genome analysis of O.marina revealed several peculiar natures of mtDNA. Oxyrrhis mtDNA consists of various kinds of minicircle with the sizes of~some kb and total number of genes encoded is only 4.

Report

(6 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report   Self-evaluation Report ( PDF )
  • 2008 Annual Research Report
  • 2007 Annual Research Report
  • Research Products

    (54 results)

All 2010 2009 2008 2007

All Journal Article (13 results) (of which Peer Reviewed: 13 results) Presentation (40 results) Book (1 results)

  • [Journal Article] Gigantic macroautophagy in programmed nuclear death of Tetrahymena thermophila.2010

    • Author(s)
      Akematsu T, Pearlman R.E, Endoh H
    • Journal Title

      Autophagy 6

      Pages: 901-911

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Role of apoptosis-inducing factor (AIF) in programmed nuclear death during conjugation in Tetrahymena thermophila.2010

    • Author(s)
      Akematsu T, Endoh H
    • Journal Title

      BMC Cell Biol. 11

      Pages: 13-27

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Role of apoptosis-inducing factor (AIF) in programmed nuclear death during conjugation in Tetrahymena thermophila.2010

    • Author(s)
      Takahiko Akematsu, Hiroshi Endoh
    • Journal Title

      BMC Cell Biology

      Volume: 11 Pages: 13-27

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Gigantic macroautophagy in programmed nuclear death of Tetrahymena thermophila.2010

    • Author(s)
      Takahiko Akematsu, Ronald E.Pearlman, Hiroshi Endoh
    • Journal Title

      Autophagy

      Volume: 6 Pages: 901-911

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Role of apoptosis-inducing factor (AIF) in programmed nuclear death during conjug ation in Tetrahymena thermophila2010

    • Author(s)
      Akematsu T, Endoh H
    • Journal Title

      BMC Cell Biol. 11

      Pages: 13-27

    • Related Report
      2009 Self-evaluation Report
    • Peer Reviewed
  • [Journal Article] Role of apoptosis-inducing factor(AIF)in programmed nuclear death during conjugation in Tetrahymena thermophila2010

    • Author(s)
      Takahiko Akematsu, Hiroshi Endoh
    • Journal Title

      BMC Cell Biology 11

      Pages: 13-27

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Phylogenetic analyses of the dinoflagellate No ctiluca scintillans based on beta-tubulin and Hsp90 genes.2008

    • Author(s)
      Fukuda Y, Endoh H
    • Journal Title

      Eur.J.Protistol. 42

      Pages: 209-219

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Differentially expressed genes during fruiting body development in the aggregative ciliate Sorogena stoianovitchae (Ciliophora : Colpodea).2008

    • Author(s)
      Sugimoto H, Endoh H
    • Journal Title

      J.Eukaryot.Microbiol. 42

      Pages: 209-219

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Phylogenetic analyses of the dinoflagellate Noctiluca scintillans (based on beta-tubulin and Hsp90 genes)2008

    • Author(s)
      Fukuda Y, Endoh H
    • Journal Title

      Eur.J.Protistol. 42

      Pages: 209-219

    • Related Report
      2009 Self-evaluation Report
    • Peer Reviewed
  • [Journal Article] Differentially expressed genes during fruiting body development in the aggregative ciliate Sorogena stoianovitc hae (Ciliophora : Colpodea)2008

    • Author(s)
      Sugimoto H, Endoh H
    • Journal Title

      Eur.J.Protistol. 42

      Pages: 209-219

    • Related Report
      2009 Self-evaluation Report
    • Peer Reviewed
  • [Journal Article] Differentially expressed genes during fruiting body development in the aggregatitive ciliate Sorogena stoianovitchae (Ciliophora : Colpodea)2008

    • Author(s)
      Sugimoto H, Endoh H
    • Journal Title

      J. Eukaryot. Microbiol. 55

      Pages: 110-116

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Differentially expressed genes during fruiting body development in the aggregatitive ciliate Sorogena stoianovitchae (Ciliophora: Colpodea)2008

    • Author(s)
      Sugimoto H, Endoh H
    • Journal Title

      J.Eukaryot.Microbiol. 55

      Pages: 110-116

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Phylogenetic analyses of the dinoflagellate Noctiluca scintillans based on β-tubulin and Hsp90 genes2008

    • Author(s)
      Fukuda Y, Endoh H
    • Journal Title

      Eur.J.Protistol. 44

      Pages: 27-33

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Presentation] ミトコンドリアゲノムからみた渦鞭毛虫類とアピコンプレクサ類の初期進化2010

    • Author(s)
      北田菜穂美、遠藤浩
    • Organizer
      第43回日本原生動物学会
    • Place of Presentation
      茨城大学(茨城県)
    • Year and Date
      2010-11-06
    • Related Report
      2010 Final Research Report
  • [Presentation] ミトコンドリアゲノムからみた渦鞭毛虫類とアピコンプレクサ類の初期進化2010

    • Author(s)
      北田菜穂美、遠藤浩
    • Organizer
      第43回日本原生動物学会
    • Place of Presentation
      茨城大学理学部、水戸
    • Year and Date
      2010-11-06
    • Related Report
      2010 Annual Research Report
  • [Presentation] 祖先的繊毛虫原子大核類Loxodesの培養法の検討2010

    • Author(s)
      吉野亜紀、遠藤浩
    • Organizer
      第43回日本原生動物学会
    • Place of Presentation
      茨城大学理学部、水戸
    • Year and Date
      2010-11-06
    • Related Report
      2010 Annual Research Report
  • [Presentation] テトラヒメナの核退化におけるミトコンドリア内在性ヌクレアーゼの役割2010

    • Author(s)
      長田恵梨子、明松隆彦、遠藤浩
    • Organizer
      第43回日本原生動物学会
    • Place of Presentation
      茨城大学理学部、水戸
    • Year and Date
      2010-11-06
    • Related Report
      2010 Annual Research Report
  • [Presentation] 原生動物テトラヒメナによるセルロース分解系2010

    • Author(s)
      中島千佳、守屋繁春、仁宮一章、遠藤浩
    • Organizer
      第62回日本生物工学会大会
    • Place of Presentation
      シーガイア、宮崎
    • Year and Date
      2010-10-29
    • Related Report
      2010 Annual Research Report
  • [Presentation] シロアリ共生鞭毛虫の遺伝子群を導入したテトラヒメナによるセルロース分解系の構築2010

    • Author(s)
      遠藤浩、中島千佳
    • Organizer
      日本動物学会第81回東京大会2010サデライトシンポジウム「原生生物は未来を拓くバイオマシン」
    • Place of Presentation
      東京大学教養学部 招待講演
    • Year and Date
      2010-09-24
    • Related Report
      2010 Annual Research Report
  • [Presentation] Mitochondrial genome of the ancestral dinoflagellate Oxyrrhis marina2010

    • Author(s)
      Kitada N, Fukuda Y, Endoh H.
    • Organizer
      The 18th International Society for Evolutionary Protistology
    • Place of Presentation
      石川県立美術館(石川県)
    • Year and Date
      2010-07-06
    • Related Report
      2010 Final Research Report
  • [Presentation] Mitochondrial genome of the ancestral dinoflagellate Oxyrrhis marina.2010

    • Author(s)
      Nahomi Kitada, Yasuhiro Fukuda, Hiroshi Endoh
    • Organizer
      The 18^<th> Meeting of the International Society for Evolutionary Protistology
    • Place of Presentation
      石川県立美術館、金沢
    • Year and Date
      2010-07-06
    • Related Report
      2010 Annual Research Report
  • [Presentation] 大核の起源:トランスポゾン侵入説2009

    • Author(s)
      遠藤浩
    • Organizer
      第42回日本原生動物学会
    • Place of Presentation
      石巻専修大学、石巻(宮城県)
    • Year and Date
      2009-11-01
    • Related Report
      2009 Annual Research Report
  • [Presentation] 祖先的渦鞭毛虫 Oxyrrhis marina のミトコンドリアゲノム解析2009

    • Author(s)
      北田菜穂美、遠藤浩
    • Organizer
      第42回日本原生動物学会
    • Place of Presentation
      石巻専修大学(宮城県)
    • Year and Date
      2009-10-31
    • Related Report
      2010 Final Research Report
  • [Presentation] 祖先的渦鞭毛虫 Oxyrrhis marina のミトコンドリアゲノム解析2009

    • Author(s)
      北田菜穂美, 遠藤浩
    • Organizer
      第42回日本原生動物学会
    • Place of Presentation
      石巻専修大学 (宮城県)
    • Year and Date
      2009-10-31
    • Related Report
      2009 Self-evaluation Report
  • [Presentation] テトラヒメナを利用した異種タンパク質分泌の試み~セルロース分解系構築へ向けて~2009

    • Author(s)
      中島千佳、遠藤浩
    • Organizer
      第42回日本原生動物学会
    • Place of Presentation
      石巻専修大学、石巻(宮城県)
    • Year and Date
      2009-10-31
    • Related Report
      2009 Annual Research Report
  • [Presentation] テトラヒメナの核退化からみたアポトーシスの捉え方2009

    • Author(s)
      明松隆彦、遠藤浩
    • Organizer
      第42回日本原生動物学会
    • Place of Presentation
      石巻専修大学、石巻(宮城県)
    • Year and Date
      2009-10-31
    • Related Report
      2009 Annual Research Report
  • [Presentation] テトラヒメナの核アポトーシスに関わるミトコンドリア局在性ヌクレアーゼの同定2009

    • Author(s)
      長田恵梨子、遠藤浩
    • Organizer
      第42回日本原生動物学会
    • Place of Presentation
      石巻専修大学、石巻(宮城県)
    • Year and Date
      2009-10-31
    • Related Report
      2009 Annual Research Report
  • [Presentation] ゾウリムシの接合初期過程に発現するmRNA型non-coding RNA遺伝子2009

    • Author(s)
      長谷川寛、遠藤浩
    • Organizer
      第42回日本原生動物学会
    • Place of Presentation
      石巻専修大学、石巻(宮城県)
    • Year and Date
      2009-10-31
    • Related Report
      2009 Annual Research Report
  • [Presentation] 祖先的渦鞭毛虫Oxyrrhis marinaのミトコンドリアゲノム解析2009

    • Author(s)
      北田菜穂美、遠藤浩
    • Organizer
      第42回日本原生動物学会
    • Place of Presentation
      石巻専修大学・石巻(宮城県)
    • Year and Date
      2009-10-31
    • Related Report
      2009 Annual Research Report
  • [Presentation] New details from the complete life cycle and gamete morphologies of the red tide dinoflagellate Noctiluca scintillans (Ehrenberg) McCartney2009

    • Author(s)
      Fukuda Y, Endoh H.
    • Organizer
      The 13th International Congress of Protistology
    • Place of Presentation
      Hotel Atlantico Buzios Convention and Resort,(ブラジル)
    • Year and Date
      2009-08-26
    • Related Report
      2010 Final Research Report
  • [Presentation] Role of apoptosis-inducing factor in programmed nuclear death during conjugation in Tetrahymena thermophila2009

    • Author(s)
      Takahiko Akematsu, Hiroshi Endoh
    • Organizer
      2009 FASEB Summer Research Conferences(Ciliate Molecular Biology)
    • Place of Presentation
      Vermont Academy, Saxtons River, Vermont, USA
    • Year and Date
      2009-07-27
    • Related Report
      2009 Annual Research Report
  • [Presentation] 渦鞭毛虫Oxyrrhis marinaのミトコンドリアゲノム解析2009

    • Author(s)
      北田菜穂美、遠藤浩
    • Organizer
      第4回日本進化原生生物学研究会
    • Place of Presentation
      宮城教育大学、仙台(宮城県)
    • Year and Date
      2009-07-04
    • Related Report
      2009 Annual Research Report
  • [Presentation] 繊毛虫テトラヒメナの核アポトーシスにおけるAIFの役割2008

    • Author(s)
      明松隆彦, 遠藤浩
    • Organizer
      日本分子生物学会・日本生化学会合同大会
    • Place of Presentation
      奈良
    • Year and Date
      2008-12-12
    • Related Report
      2008 Annual Research Report
  • [Presentation] ヤコウチュウの生活環と渦鞭毛虫の初期進化2008

    • Author(s)
      福田康弘、洲崎敏伸、遠藤浩
    • Organizer
      ユーグレナ研究会第24回研究集会
    • Place of Presentation
      近畿大学(奈良県)
    • Year and Date
      2008-11-15
    • Related Report
      2010 Final Research Report
  • [Presentation] ヤコウチュウの生活環と渦鞭毛虫の初期進化2008

    • Author(s)
      福田康弘, 洲崎敏伸, 遠藤浩
    • Organizer
      ユーグレナ研究会第24回研究集会
    • Place of Presentation
      奈良
    • Year and Date
      2008-11-15
    • Related Report
      2008 Annual Research Report
  • [Presentation] Evolution of apoptosis : a case study of nuclear apoptosis in ciliates2008

    • Author(s)
      Hiroshi Endoh, Takahiko Akematsu, Takashi Kobayashi
    • Organizer
      International Symposium on Protistology : Evolution and Diversity
    • Place of Presentation
      つくば、茨城
    • Year and Date
      2008-11-09
    • Related Report
      2008 Annual Research Report
  • [Presentation] テトラヒメナの核アポトーシス初期過程の実行因子はミトコンドリアに存在する2008

    • Author(s)
      明松隆彦, 遠藤浩
    • Organizer
      日本原生動物学会
    • Place of Presentation
      つくば、茨城
    • Year and Date
      2008-11-02
    • Related Report
      2008 Annual Research Report
  • [Presentation] 原生生物テトラヒメナの核アポトーシスにおけるAIFの役割2008

    • Author(s)
      明松隆彦, 遠藤浩
    • Organizer
      日本アポトーシス研究会
    • Place of Presentation
      京都
    • Year and Date
      2008-08-02
    • Related Report
      2008 Annual Research Report
  • [Presentation] Conjugation-specific expression of GRP94 homologue (PcGRP92) in Paramecium caudatum is regulated by a short element located with in thecoding region2008

    • Author(s)
      Sanae Nakayama, Manabu Hori, Hiroki Sugimoto, Hiroshi Endoh
    • Organizer
      Protist 2008 Conference
    • Place of Presentation
      ハリファックス、カナダ
    • Year and Date
      2008-07-24
    • Related Report
      2008 Annual Research Report
  • [Presentation] Theoretical consideration of early history of dinoflagellates : Haploid core-dinoflagellates might have evolved from a zoospore of ancestral diploid dinoflagellates via neoteny2008

    • Author(s)
      Fukuda Y, Suzaki T, Endoh H.
    • Organizer
      Protist 2008 Conference (The 59th International Society of Protistology and the 17th International Society for Evolutionary Protistology, Joint conference)
    • Place of Presentation
      Dalhausie University (カナダ)
    • Year and Date
      2008-07-23
    • Related Report
      2010 Final Research Report
  • [Presentation] Theoretical consideration of early history of dinoflagellates : Haploid coredinoflagellates might have evolved from a zoospore of ancestral diploid dinoflagellates via neoteny2008

    • Author(s)
      Fukuda Y, Suzaki T, Endoh H.
    • Organizer
      Protist2008 (ISOP 59^<th> and ISEP17^<th> joint conference)
    • Place of Presentation
      Dalhousie University, Halifax (Canada)
    • Year and Date
      2008-07-23
    • Related Report
      2009 Self-evaluation Report
  • [Presentation] Theoretical consideration of early history of dinoflagellates : Haploid core-dinoflagellates might have evolved from a zoospore of ancestral diploiddinoflagellates via neoteny2008

    • Author(s)
      Yasuhiro FUKUDA, Toshinobu SUZAKI, Hiroshi ENDOH
    • Organizer
      Protist 2008 Conference
    • Place of Presentation
      ハリファックス、カナダ
    • Year and Date
      2008-07-23
    • Related Report
      2008 Annual Research Report
  • [Presentation] 渦鞭毛虫の初期進化:遊走子のネオテニーとコア渦鞭毛虫の出現2007

    • Author(s)
      福田康弘、遠藤浩
    • Organizer
      第40回日本原生動物学会
    • Place of Presentation
      富山大学(富山県)
    • Year and Date
      2007-11-18
    • Related Report
      2010 Final Research Report
  • [Presentation] 渦鞭毛虫の初期進化:遊走子のネオテニーとコア渦鞭毛虫の出現2007

    • Author(s)
      福田 康弘、遠藤 浩
    • Organizer
      第40回日本原生動物学会
    • Place of Presentation
      富山大学、富山
    • Year and Date
      2007-11-18
    • Related Report
      2007 Annual Research Report
  • [Presentation] Sorogena stoianovitchaeの子実体形成に関わる糖鎖の探索2007

    • Author(s)
      杉本 大樹、遠藤 浩
    • Organizer
      第40回日本原生動物学会
    • Place of Presentation
      富山大学、富山
    • Year and Date
      2007-11-18
    • Related Report
      2007 Annual Research Report
  • [Presentation] ゾウリムシの接合初期に特異的に発現する熱ショック関連遺伝子2007

    • Author(s)
      中山 早苗、堀 学、杉本 大樹、遠藤 浩
    • Organizer
      第40回日本原生動物学会
    • Place of Presentation
      富山大学、富山
    • Year and Date
      2007-11-18
    • Related Report
      2007 Annual Research Report
  • [Presentation] Life cycle and phylogenetic position of dinoflagellate (Noctiluca scintillans).2007

    • Author(s)
      Fukuda Y, Endoh H.
    • Organizer
      The 5th European Congress of Protistology and the 11th European Conference on Ciliate Biology (joint conference)
    • Place of Presentation
      Saint Petersburg State University(ロシア)
    • Year and Date
      2007-07-24
    • Related Report
      2010 Final Research Report
  • [Presentation] Life cycle and phylogenetic position of dinoflagellate (Noctiluca scintillans)2007

    • Author(s)
      Fukuda Y, Endoh H
    • Organizer
      V European Congress of Protistology and XI European Conferenceon Ciliate Biology
    • Place of Presentation
      サンクトペテルブルク、ロシア
    • Year and Date
      2007-07-24
    • Related Report
      2007 Annual Research Report
  • [Presentation] Genome Plasticity in the Dicyemid Mesozoans2007

    • Author(s)
      Awata T, Noto T, Endoh H
    • Organizer
      V European Congress of Protistology and XI European Conference on Ciliate Biology
    • Place of Presentation
      サンクトペテルブルク、ロシア
    • Year and Date
      2007-07-24
    • Related Report
      2007 Annual Research Report
  • [Presentation] ヤコウチュウ(Noctiluca scintillans)の全生活環, および形態と分子からみた系統的位置2007

    • Author(s)
      福田康弘、遠藤浩
    • Organizer
      第3回日本進化原生生物学研究会
    • Place of Presentation
      海洋研究開発機構横浜研究所(神奈川県)
    • Year and Date
      2007-07-07
    • Related Report
      2010 Final Research Report
  • [Presentation] ヤコウチュウ(Noctiluca scinti!lans)の全生活環,および形態と分子からみた系統的位置2007

    • Author(s)
      福田 康弘、遠藤 浩
    • Organizer
      第3回日本進化原生生物学研究会
    • Place of Presentation
      海洋研究開発機構横浜研究所、横浜
    • Year and Date
      2007-07-07
    • Related Report
      2007 Annual Research Report
  • [Presentation] 繊毛虫における核退化:細胞死を伴わないユニークなアポトーシス2007

    • Author(s)
      明松 隆彦、松岡 達臣、遠藤 浩
    • Organizer
      第3回日本進化原生生物学研究会
    • Place of Presentation
      海洋研究開発機構横浜研究所、横浜
    • Year and Date
      2007-07-07
    • Related Report
      2007 Annual Research Report
  • [Presentation] 中生動物ニハイチュウの寄生適応戦略:ミトコンドリア及び核,両オルガネラにおけるプログラム化されたゲノム再編成2007

    • Author(s)
      粟田 ひろ子、能登 朋子、遠藤 浩
    • Organizer
      第3回日本進化原生生物学研究会
    • Place of Presentation
      海洋研究開発機構 横浜研究所、横浜
    • Year and Date
      2007-07-07
    • Related Report
      2007 Annual Research Report
  • [Book] 生物学事典(共著(分担執筆))2010

    • Publisher
      東京化学同人
    • Related Report
      2010 Final Research Report

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Published: 2007-04-01   Modified: 2016-04-21  

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