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2018 年度 実績報告書

Visualization of metabolic dynamics during pattern formation in bacteria

研究課題

研究課題/領域番号 16K07333
研究機関東北大学

研究代表者

Robert Martin  東北大学, 高度教養教育・学生支援機構, 准教授 (90365487)

研究期間 (年度) 2016-04-01 – 2019-03-31
キーワードgene expression / time-lapse fluorescence / biofilm / fluorescent reporter / pattern formation / fusion protein / cyclic di-nucleotides
研究実績の概要

During this final, we were able to analyze the dynamics of gene expression of multiple metabolic enzymes and regulators within macro-colonies of E. coli. This was done for multiple genes under various nutritional conditions (rich or minimal medium of varying agar concentration).

Using GFP-reporter fluorescent strains we were able to characterize the variation in the level, dynamics, and localization of gene expression in complex macro-colony and biofilm structures. Overall, our results reveal the spacio-temporal complexity of gene expression within large bacterial collectives and biofilms that reflect local environmental conditions. These findings reveal some functional differentiation within clonal populations of bacteria and suggests such structures can also mimic developmental processes.

  • 研究成果

    (5件)

すべて 2019 2018

すべて 雑誌論文 (1件) (うち国際共著 1件、 オープンアクセス 1件) 学会発表 (4件) (うち国際学会 1件、 招待講演 1件)

  • [雑誌論文] Complexity and Possible Emergence of Intelligence in Bacterial Collectives2018

    • 著者名/発表者名
      Robert, Martin
    • 雑誌名

      Journal of Cognitive Science

      巻: 19 ページ: 283-284

    • オープンアクセス / 国際共著
  • [学会発表] Structural and functional complexity within E. coli microcolonies and biofilms.2019

    • 著者名/発表者名
      Martin Robert
    • 学会等名
      E. coli systems biology workshop: Annual meeting in Awaji. (Awaji, Hyogo, Japan)
    • 招待講演
  • [学会発表] Gene expression patterns in growing E. coli biofilms and macro-colonies.2019

    • 著者名/発表者名
      Xiang Zhou, Wataru Shoji and Martin Robert
    • 学会等名
      E. coli systems biology workshop: Annual meeting in Awaji. (Awaji, Hyogo, Japan)
  • [学会発表] Patterns of metabolic gene expression within Escherichia coli biofilms and macro-colonies.2018

    • 著者名/発表者名
      Martin Robert
    • 学会等名
      Advances in Physics of Emergent orders in Fluctuations (APEF 2018) Tokyo, Japan
  • [学会発表] Metabolic activity within Escherichia coli macrocolonies and biofilms.2018

    • 著者名/発表者名
      Xiang Zhou, Wataru Shoji and Martin Robert
    • 学会等名
      The 19th International Conference on Systems Biology (ICSB 2018), Lyon, France
    • 国際学会

URL: 

公開日: 2019-12-27  

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