先進ゲノム解析研究推進プラットフォーム

2017 Fiscal Year Annual Research Report

• Project/Area Number: 16H06279
• Research Institution: National Institute of Genetics
• Principal Investigator: 小原 雄治 国立遺伝学研究所, 先端ゲノミクス推進センター, 特任教授
• Project Period (FY): 2016 – 2021
• Keywords: 次世代DNAシーケンサー / 新規ゲノム配列決定 / リシーケンシング / エピゲノム / RNA-Seq / 1細胞解析 / メタゲノム解析 / スーパーコンピューター

Outline of Annual Research Achievements

①総括支援活動では、支援課題の公募を行い、領域外有識者による審査委員会により選考し、支援を行った。経費上限設定など多くの採択ができるように努めた結果、応募188件、採択93件(採択率49.5%)となった。支援の成果として2017年度に54報の論文発表がなされた。
②大規模配列解析拠点ネットワーク支援活動においては、最先端技術を提供するためにそれらの整備や高度化を進めた。遺伝研拠点では染色体の端から端までの連続した配列完成を目指して、ロングリードシーケンサー(PacBio Sequel)、長鎖DNA試料調製技術、さらに1分子ゲノムマッピングシステム(Irysシステム)の最適化を進め、実際の試料に応用した。東大柏拠点では、1細胞解析技術を整備し支援に供するとともに、Nanopore MinIONを用いた一連の要素技術開発を進めた。九大拠点では微生物ゲノムのNGS解析最適化を進めた。札幌医大拠点ではLiquid Biopsyによる体細胞における低頻度変異検出技術開発を進めた。
③高度情報解析支援ネットワーク活動では、支援から浮かび上がった課題を解決するソフトウェアの開発を進めた。支援で特に活用されたものは、真核2倍体用denovoハプロタイプアセンブラPlatanus2(東工大)、染色体大規模構造変異高精度検出アルゴリズムCOSMOS、変異解析結果の信頼性を評価するソフトウェアEAGLE(以上、産総研)、エクソン・イントロン境界におけるスプライソソーム結合頻度の解析パイプライン(東大)、であった。また、CLIP-seqデータの解析パイプライン、高速オルソログ同定プログラムSonicParanoid、ロングリード向けアラインメントツールminialign(以上、東大)は今後の活用が予想される。
高度化等の成果として48報の論文発表がなされた。

Current Status of Research Progress

2: Research has progressed on the whole more than it was originally planned.

Reason

・研究支援代表の下、研究支援分担者21名、連携研究支援者26名、総勢48名の班員が全国16の大学・研究機関(部局数は25)から参加して、支援及びそのための技術高度化を進めることができた。また、引き続き国立遺伝学研究所を中核機関とし、参加する班員が所属する主な機関を連携機関とする連携ネットワークを形成して、支援を進めた。
・支援課題公募については、透明性を確保するために審査委員会は領域外有識者のみとし、領域からの技術的・経費的な情報提供を参考に支援課題を決定した。支援希望内容は各課題で拡大する傾向にあるが、経費上限を設定するなどしてできるだけ多く支援するように努め、本年度は採択率を約50%に引き上げることができた。科研費全種目から課題採択できているが、同程度の評価の場合は若手・少額科研費からの課題を優先するなどの措置をとった。支援技術分類は、新規ゲノム決定 : 18件、変異解析 : 25件、修飾解析 : 21件、RNA解析 : 40件、メタゲノム解析等 : 5件、超高感度解析 : 10件、情報解析のみ : 3件、合計122(採択1件あたり複数の技術支援がある)であり、引き続き多様な技術の提供ができた。
・支援技術の高度化のための活動も大規模DNAシーケンシング支援、高度情報解析支援共に進めることができた。
・初年度開催できなかった拡大班会議を開催し、支援依頼者の若手共同研究者の旅費援助をするなどして、支援側と依頼者の交流を深めることができた。

Strategy for Future Research Activity

・最先端の技術をより多く提供するために、支援技術の高度化を進めることが重要である。ゲノム解析は技術進展のスピードが特に速く、2-3年で解析手法が様変わりするために、新たなDNAシーケンシング技術の導入・開発、目的に沿った情報解析技術の開発と整備が中心になる。
・支援課題の採択率は、現状は予算の制限から50%にとどまっており、より多い課題の支援が求められる。現状では、各支援課題の支援経費の上限を設けて、これを超す分は経費負担を求める形にすることで、ようやくこの採択率になっている。解析内容を精査する効果はあるが、一方でゲノム解析においては一定規模以上で支援しないと意味のある結果が出ないことも多く、若手をはじめ、経費面で敷居が高くなるケースもある。そのためにも技術高度化により、より効果的な解析技術の整備やコスト削減を図っていく必要がある。
・大量データ解析の支援要望はますます増加していることから、解析パイプラインの整備とともに、情報解析講習会の開催を継続拡充する必要がある。

Research Products

• [Int'l Joint Research] コールドスプリングハーバー研究所/エネルギー省連合ゲノム研究所/ヴァンダービルト大学(米国)
  • Country Name: U.S.A.
  • Counterpart Institution: コールドスプリングハーバー研究所/エネルギー省連合ゲノム研究所/ヴァンダービルト大学
  • # of Other Institutions: 6
• [Int'l Joint Research] マックスプランク研究所/ミュンスター大学/オスナブリュック大学(ドイツ)
  • Country Name: GERMANY
  • Counterpart Institution: マックスプランク研究所/ミュンスター大学/オスナブリュック大学
• [Int'l Joint Research] ケンブリッジ大学/オックスフォード大学(英国)
  • Country Name: UNITED KINGDOM
  • Counterpart Institution: ケンブリッジ大学/オックスフォード大学
• [Int'l Joint Research] モナシュ大学/メルボルン大学(オーストラリア)
  • Country Name: AUSTRALIA
  • Counterpart Institution: モナシュ大学/メルボルン大学
• [Int'l Joint Research] チュラーロンコーン大学/マヒドン大学(タイ)
  • Country Name: THAILAND
  • Counterpart Institution: チュラーロンコーン大学/マヒドン大学
• [Int'l Joint Research]
  • # of Other Countries: 10
• [Journal Article] Refining the clinical phenotype of Okur-Chung neurodevelopmental syndrome. (2018)
  • Author(s): Akahira-Azuma M, Tsurusaki Y, Enomoto Y, Mitsui J, Kurosawa K.
  • Journal Title: Hum Genome Var. Volume: 5 Pages: 18011
  • DOI: 10.1038/hgv.2018.11
  • Peer Reviewed / Open Access
• [Journal Article] High-quality overlapping paired-end reads for the detection of A-to-I editing on small RNA. (2018)
  • Author(s): Galipon J, Ishii R, Ishiguro S, Suzuki Y, Kondo S, Okada-Hatakeyama M, Tomita M, Ui-Tei K.
  • Journal Title: Methods Mol. Biol. Volume: 1823 Pages: 167-183
  • DOI: 10.1007/978-1-4939-8624-8_13
• [Journal Article] Layer-specific morphological and molecular differences in neocortical astrocytes and their dependence on neuronal layers (2018)
  • Author(s): Darin Lanjakornsiripan, Baek-Jun Pior, Daichi Kawaguchi, Shohei Furutachi, Tomoaki Tahara, Yu Katsuyama, Yutaka Suzuki, Yugo Fukazawa & Yukiko Gotoh
  • Journal Title: Nature Communications Volume: 91 Pages: 1623
  • DOI: 10.1038/s41467-018-03940-3
  • Peer Reviewed / Open Access
• [Journal Article] Host lignin composition affects haustorium induction in the parasitic plants Phtheirospermum japonicum and Striga hermonthica. (2018)
  • Author(s): Cui S, Wada S, Tobimatsu Y, Takeda Y, Saucet SB, Takano T, Umezawa T, Shirasu K, Yoshida S.
  • Journal Title: New Phytol. Volume: 218 Pages: 710-723
  • DOI: 10.1111/nph.15033
  • Peer Reviewed / Open Access
• [Journal Article] Genomic landscape at a late stage of stickleback speciation : high genomic divergence interspersed by small localized regions of introgression. (2018)
  • Author(s): Ravinet, M., Yoshida, K., Shigenobu, S., Toyoda, A., Fujiyama, A., and Kitano, J.
  • Journal Title: PLoS Genetics Volume: 14 Issue: 5 Pages: e1007358
  • DOI: 10.1371/journal.pgen.1007358
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Base-pairing probability in the microRNA stem region affects the binding and editing specificity of human A-to-I editing enzyme ADAR1-p110 and ADAR2. (2018)
  • Author(s): Ishiguro S, Galipon J, Ishii R, Suzuki Y, Kondo S, Okada-Hatakeyama M, Tomita M, Ui-Tei K.
  • Journal Title: RNA Biology Volume: 15 Pages: 976-989
  • DOI: 10.1080/15476286.2018.1486658
  • Peer Reviewed / Open Access
• [Journal Article] Tissue network underlying cold tolerance (2018)
  • Author(s): Mayu Fujita, Kohei Ohnishi, Akane Ohta, Atsushi Kuhara
  • Journal Title: 細胞 Volume: 50 Pages: 8-11
  • Peer Reviewed
• [Journal Article] DFAST : a flexible prokaryotic genome annotation pipeline for faster genome publication (2018)
  • Author(s): Y Tanizawa, T Fujisawa, Y Nakamura
  • Journal Title: Bioinformatics Volume: 34 Issue: 6 Pages: 1037-1039
  • DOI: 10.1093/bioinformatics/btx713
  • Peer Reviewed / Open Access
• [Journal Article] Capturing alternative secondary structures of RNA by decomposition of base-pairing probabilities (2018)
  • Author(s): Taichi Hagio, Shun Sakuraba, Junichi Iwakiri, Ryota Mori and Kiyoshi Asai
  • Journal Title: BMC Bioinformatics Volume: 19 Issue: Suppl 1 Pages: 38
  • DOI: 10.1186/s12859-018-2018-4
  • Peer Reviewed / Open Access
• [Journal Article] Introducing difference recurrence relations for faster semi-global alignment of long sequences (2018)
  • Author(s): Hajime Suzuki and Masahiro Kasahara.
  • Journal Title: BMC Bioinformatics Volume: 19 Issue: Suppl 1 Pages: 45
  • DOI: 10.1186/s12859-018-2014-8
  • Peer Reviewed / Open Access
• [Journal Article] Identifying statistically significant combinatorial markers for survival analysis. (2018)
  • Author(s): Relator R, Terada A, Sese J.
  • Journal Title: BMC Bioinformatics Volume: 11 Issue: Suppl 2 Pages: 31
  • DOI: 10.1186/s12920-018-0346-x
  • Peer Reviewed / Open Access
• [Journal Article] EAGLE : Explicit Alternative Genome Likelihood Evaluator. (2018)
  • Author(s): Kuo T, Frith M C, Sese J, and Horton P.
  • Journal Title: BMC Medical Genomics. Volume: 11 Issue: Suppl 2 Pages: 28
  • DOI: 10.1186/s12920-018-0342-1
  • Peer Reviewed / Open Access
• [Journal Article] VITCOMIC2 : visualization tool for the phylogenetic composition of microbial communities based on 16SrRNA gene amplicons and metagenomic shotgun sequencing (2018)
  • Author(s): Mori H, Maruyama T, Yano M, Yamada T, Kurokawa K.
  • Journal Title: BMC Systems Biology Volume: 12 Pages: 30
  • DOI: 10.1186/s12918-018-0545-2
  • Peer Reviewed / Open Access
• [Journal Article] Combined mutation of Apc, Kras and Tgfbr2 effectively drives metastasis of intestinal cancer. (2018)
  • Author(s): Sakai E, Nakayama M, Oshima H, Kouyama Y, Niida A, Fujii S, Ochiai A, Nakayama KI, Mimori K, Suzuki Y, Hong CP, Ock CY, Kim SJ, and Oshima M.
  • Journal Title: Cancer Research Volume: 78 Pages: 1334-1346
  • DOI: 10.1158/0008-5472.CAN-17-3303
  • Peer Reviewed / Int'l Joint Research
• [Journal Article] Transcription factor IRF8 governs enhancer landscape dynamics in mononuclear phagocyte progenitors (2018)
  • Author(s): Kurotaki D, Nakabayashi J, Nishiyama A, Sasaki H, Kawase W, Kaneko N, Ochiai K, Igarashi K, Ozato K, Suzuki Y, Tamura T
  • Journal Title: Cell Reports Volume: 22 Pages: 2628-2641
  • DOI: 10.1016/j.celrep.2018.02.048
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Anisogamy evolved with a reduced sex-determining region in volvocine green algae. (2018)
  • Author(s): Hamaji, T., Kawai-Toyooka, H., Uchimura, H., Suzuki, M., Noguchi, H., Minakuchi, Y., Toyoda, A., Fujiyama, A., Miyagishima, S., Umen, J. G. And Nozaki, H.
  • Journal Title: Communications Biology Volume: 1 Pages: 17
  • DOI: 10.1038/s42003-018-0019-5
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Identification of DNA methylated regions by using methylated DNA immunoprecipitation sequencing in Brassica rapa (2018)
  • Author(s): Takahashi S, Fukushima N, Osabe K, Itabashi E, Shimizu M, Miyaji N, Takasaki-Yasuda T, Suzuki Y, Seki M, Fujimoto R
  • Journal Title: Crop & Pasture Science Volume: 69 Pages: 107-120
  • DOI: 10.1071/CP17394
  • Peer Reviewed
• [Journal Article] Molecular and Cellular Network Systems Underlying Cold Tolerance of Caenorhabditis elegans (2018)
  • Author(s): Kohei OHNISHI, Natsune TAKAGAKI, Misaki OKAHATA, Mayu FUJITA, Akane OHTA, Atsushi KUHARA
  • Journal Title: Cryobiology and Cryotechnology
  • Peer Reviewed / Open Access
• [Journal Article] Subtypes of the Type II Pit Pattern Reflect Distinct Molecular Subclasses in the Serrated Neoplastic Pathway. (2018)
  • Author(s): Aoki H, Yamamoto E, Yamano HO, Sugai T, Kimura T, Tanaka Y, Matsushita HO, Yoshikawa K, 他10名, Kai M, Nojima M, Suzuki H, Nakase H
  • Journal Title: Dig Dis Sci.
  • DOI: 10.1007/s10620-018-5016-5
  • Peer Reviewed / Open Access
• [Journal Article] Diminished nuclear RNA decay upon Salmonella infection upregulates antibacterial noncoding RNAs (2018)
  • Author(s): Imamura K, Takaya A, Ishida Y, Fukuoka Y, Taya T, Nakaki R, Kakeda M, Imamachi N, Sato A, Yamada T, Onoguchi-Mizutani R, Akizuki G, Tanu T, Tao K, Miyao S, Suzuki Y, Nagahama M, Yamamoto T, Jensen TH, Akimitsu N.
  • Journal Title: EMBO Journal
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Mice with endogenous TDP-43 mutations exhibit gain of splicing function and characteristics of amyotrophic lateral sclerosis. (2018)
  • Author(s): Fratta P, Sivakumar P, Humphrey J, Lo K, Ricketts T, Oliveira H, Brito JM, Kalmar B, Ule A, Yu Y, Gondo Y, 他18名, Buratti E, Plagnol V, Fisher EM, Acevedo A
  • Journal Title: EMBO Journal
  • DOI: 10.15252/embj.201798684
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Targeted sequencing reveals genetic variants associated with sensitivity of 79 human cancer xenografts to anticancer drugs. (2018)
  • Author(s): Udagawa C, Sasaki Y, Suemizu H, Ohnishi Y, Ohnishi H, Tokino T, Zembutsu H.
  • Journal Title: Exp Ther Med Volume: 15 Pages: 1339-1359
  • DOI: 10.3892/etm.2017.5533
  • Peer Reviewed
• [Journal Article] Identification of Minimal p53 Promoter Region Regulated by MALAT1 in Human Lung Adenocarcinoma Cells. (2018)
  • Author(s): Tano K, Onoguchi-Mizutani R, Yeasmin F, Uchiumi F, Suzuki Y, Yada T, Akimitsu N.
  • Journal Title: Front Genet. Volume: 8 Pages: 208
  • DOI: 10.3389/fgene.2017.00208.eCollection 2017
  • Peer Reviewed / Open Access
• [Journal Article] Delayed degradation and impaired dendritic delivery of intron-lacking EGFP-Arc/Arg3.1 mRNA in EGFP-Arc transgenic mice (2018)
  • Author(s): Steward O, Matsudaira-Yee K, Rarris S, Salgado-Pirbhoy P, Worely P, Okamura K, Okuno H, Bito H
  • Journal Title: Front Mol Neurosci Volume: 10 Pages: 435
  • DOI: 10.3389/fnmol.2017.00435
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Identification of transposable elements contributing to tissue-specific expression of long non-coding RNAs (2018)
  • Author(s): Takashi Chishima, Junichi Iwakiri, Michiaki Hamada
  • Journal Title: Genes Volume: 9 Issue: 1 Pages: 23
  • DOI: 10.3390/genes9010023
  • Peer Reviewed / Open Access
• [Journal Article] Increasing canopy photosynthesis in rice can be achieved without a large increase in water use-a model based on free-air CO2 enrichment (2018)
  • Author(s): Ikawa, H., Chen, C. P., Sikma, M., Yoshimoto, M., Sakai, H., Tokida, T., Usui, Y., Nakamura, H., 他3名, Kuwagata, T., and Hasegawa, T.
  • Journal Title: Global Change Biology Volume: 24 Pages: 1321-1341
  • DOI: 10.1111/gcb.13981
  • Peer Reviewed / Int'l Joint Research
• [Journal Article] A common variant of MAF/c-MAF, transcriptional factor gene in the kidney, is associated with gout susceptibility. (2018)
  • Author(s): Higashino T, Matsuo H, Okada Y, Nakashima H, Shimizu S, Sakiyama M, Tadokoro S, Nakayama A, 他3名, Nakatochi M, Ooyama H, Imaki J, Shinomiya N.
  • Journal Title: Hum Cell Volume: 31 Pages: 10-13
  • DOI: 10.1007/s13577-017-0186-6
  • Peer Reviewed / Open Access
• [Journal Article] Estimating energy parameters for RNA secondary structure predictions using both experimental and computational data (2018)
  • Author(s): Shimpei Nishida, Shun Sakuraba, Kiyoshi Asai, and Michiaki Hamada
  • Journal Title: IEEE/ACM Transactions on Computational Biology and Bioinformatics
  • DOI: 10.1109/TCBB.2018.2813388
  • Peer Reviewed
• [Journal Article] Tropomyosin isoforms differentially affect muscle contractility in the head and body regions in the nematode Caenorhabditis elegans. (2018)
  • Author(s): Dawn E. Barnes, Eichi Watabe, Kanako Ono, Euiyoung Kwak, Hidehito Kuroyanagi, Shoichiro Ono
  • Journal Title: Mol Biol Cell
  • DOI: 10.1091/mbc.E17-03-0152
  • Peer Reviewed / Int'l Joint Research
• [Journal Article] Molecular insights into the non-recombining nature of the spinach male-determining region. (2018)
  • Author(s): Kudoh T., M. Takahashi, T. Osabe, A. Toyoda, H. Hirakawa, Y. Suzuki, N. Ohmido, Y. Onodera
  • Journal Title: Molecular Genetics and Genomics Volume: 293 Issue: 2 Pages: 557-568
  • DOI: 10.1007/s00438-017-1405-2
  • Peer Reviewed
• [Journal Article] Expansions of intronic TTTCA and TTTTA repeats in benign adult familial myoclonic epilepsy (2018)
  • Author(s): Ishiura H, Doi K, Mitsui J, Yoshimura J, Matsukawa MK, Fujiyama A, Suzuki Y, Sugano S, 他56名, Goto J, Morishita S, Tsuji S
  • Journal Title: Nature Genetics Volume: 50 Pages: 581-590
  • DOI: 10.1038/s41588-018-0067-2
  • Peer Reviewed / Open Access
• [Journal Article] Dynamically and epigenetically coordinated GATA/ETS/SOX transcription factor expression is indispensable for endothelial cell differentiation. (2018)
  • Author(s): Kanki Y, Nakaki R, Shimamura T, Matsunaga T, Yamamizu K, Katayama S, Suehiro JI, Osawa T, Aburatani H, Kodama T, Wada Y, Yamashita JK, Minami T.
  • Journal Title: Nucleic Acids Res. Volume: 45 Pages: 4344-4358
  • DOI: 10.1093/nar/gkx159
  • Peer Reviewed / Open Access
• [Journal Article] DBTSS/DBKERO for integrated analysis of transcriptional regulation (2018)
  • Author(s): Suzuki A, Kawano S, Mitsuyama T, Suyama M, Kanai Y, Shirahige K, Sasaki H, Tokunaga K, Tsuchihara K, Sugano S, Nakai K, Suzuki Y.
  • Journal Title: Nucleic Acids Research Volume: 46 Issue: (D1) Pages: D229-D238
  • DOI: 10.1093/nar/gkx1001
  • Peer Reviewed / Open Access
• [Journal Article] Mining of the Uncharacterized Cytochrome P450 Genes Involved in Alkaloid Biosynthesis in California Poppy Using a Draft Genome Sequence. (2018)
  • Author(s): Hori K, Yamada Y, Purwanto R, Minakuchi Y, Toyoda A, Hirakawa H, Sato F.
  • Journal Title: Plant Cell Physiol. Volume: 59 Issue: 2 Pages: 222-233
  • DOI: 10.1093/pcp/pcx210
  • Peer Reviewed
• [Journal Article] Impaired diversity of the lung microbiome predicts progression of idiopathic pulmonary fibrosis. (2018)
  • Author(s): Takahashi Y, Saito A, Chiba H, Kuronuma K. Ikeda K. Kobayashi T, Ariki S, Takahashi M, Sasaki Y, Takahashi H.
  • Journal Title: Respir Res Volume: 34
  • DOI: 10.1186/s12931-018-0736-9
  • Peer Reviewed / Open Access
• [Journal Article] The CCR4-NOT deadenylase complex controls Atg7-dependent cell death and heart function. (2018)
  • Author(s): Yamaguchi T, Suzuki T ; Sato T, Takahashi A, Watanabe H, Kadowaki A, 他14名, Suzuki Y, Penninger JM, Yamamoto T, Imai Y, Kuba K.
  • Journal Title: Science Signaling Volume: 11 Issue: 516 Pages: eaan3638
  • DOI: 10.1126/scisignal.aan3638
  • Peer Reviewed / Int'l Joint Research
• [Journal Article] Identification of potential regulatory mutations using multi-omics analysis and haplotyping of lung adenocarcinoma cell lines (2018)
  • Author(s): Sarun Sereewattanawoot, Ayako Suzuki, Masahide Seki, Yoshitaka Sakamoto, Takashi Kohno, Sumio Sugano, Katsuya Tsuchihara & Yutaka Suzuki
  • Journal Title: Scientific Reports Volume: 8 Issue: 1 Pages: 4926
  • DOI: 10.1038/s41598-018-23342-1
  • Peer Reviewed / Open Access
• [Journal Article] Combinatory use of distinct single-cell RNA-seq analytical platforms reveals the heterogeneous transcriptome response. (2018)
  • Author(s): Kashima Y, Suzuki A, Liu Y, Hosokawa M, Matsunaga H, Shirai M, Arikawa K, Sugano S, Kohno T, Takeyama H, Tsuchihara K, Suzuki Y.
  • Journal Title: Scientific Reports Volume: 8 Pages: 3482
  • DOI: 10.1038/s41598-018-21161-y
  • Peer Reviewed / Open Access
• [Journal Article] Solar-panel and parasol strategies shape the proteorhodopsin distribution pattern in marine Flavobacteriia. (2018)
  • Author(s): Kumagai Y, Yoshizawa S, Nakajima Y, Watanabe M, Fukunaga T, Ogura Y, Hayashi T, Oshima K, Hattori M, Ikeuchi M, Kogure K, DeLong EF, Iwasaki W
  • Journal Title: The ISME Journal
  • DOI: 10.1038/s41396-018-0058-4
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] ナノポアリードのアライメントツール (2018)
  • Author(s): 鈴木 創, 笠原雅弘
  • Journal Title: 実験医学 Volume: 36 Issue: 1
• [Journal Article] イチゴ新品種‘恋みのり’が有する炭疽病抵抗性-Colletotrichum gloeosporioides種複合体の菌種による差異の一例- (2018)
  • Author(s): 遠藤(飛川)みのり
  • Journal Title: 植物防疫 Volume: 72 Pages: 236-240
  • Peer Reviewed / Open Access
• [Journal Article] Significance of measurement of serum trough level and anti-drug antibody of adalimumab as personalised pharmacokinetics in patients with Crohn's disease : a subanalysis of the DIAMOND trial. (2017)
  • Author(s): Nakase H, Motoya S, Matsumoto T, Watanabe K, Hisamatsu T, Yoshimura N, Ishida T, Kato S, Nakagawa T, Esaki M, Nagahori M, 他7名 ; DIAMOND study group.
  • Journal Title: Aliment Pharmacol Ther. Volume: 46 Pages: 873-882
  • DOI: 10.1111/apt.14318
  • Peer Reviewed / Open Access
• [Journal Article] GWAS of clinically defined gout and subtypes identifies multiple susceptibility loci that include urate transporter genes. (2017)
  • Author(s): Nakayama A, Nakaoka H, Yamamoto K, 他35名,Inoue I, Kubo M, Ooyama H, Shimizu T, Ichida K, Shinomiya N, Merriman TR, Matsuo H ; Eurogout Consortium.
  • Journal Title: Ann Rheum Dis Volume: 76 Pages: 869-877
  • DOI: 10.1136/annrheumdis-2016-209632
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Training alignment parameters for arbitrary sequencers with last-train, (2017)
  • Author(s): Michiaki Hamada, Yukiteru Ono, Kiyoshi Asai, Martin C, Frith
  • Journal Title: Bioinformatics Volume: 33 Issue: 6 Pages: 926-928
  • DOI: 10.1093/bioinformatics/btw742
  • Peer Reviewed / Open Access
• [Journal Article] Computational prediction of lncRNA-mRNA interactions by integrating tissue (2017)
  • Author(s): Junichi Iwakiri, Goro Terai, Michiaki Hamada
  • Journal Title: Biology Direct Volume: 12 Pages: 15
  • DOI: 10.1186/s13062-017-0183-4
  • Peer Reviewed / Open Access
• [Journal Article] Genomic characterization reconfirms the taxonomic status of Lactobacillus parakefiri (2017)
  • Author(s): Yasuhiro TANIZAWA, Hisami KOBAYASHI, Eli KAMINUMA, Mitsuo SAKAMOTO, Moriya OHKUMA, Yasukazu NAKAMURA, Masanori ARITA, Masanori TOHNO
  • Journal Title: Biosci Microbiota Food Health. Volume: 36 Issue: 3 Pages: 129-134
  • DOI: 10.12938/bmfh.16-026
  • Peer Reviewed / Open Access
• [Journal Article] Global gene expression reveals stress-responsive genes in Aspergillus fumigatus mycelia. (2017)
  • Author(s): Takahashi H, Kusuya Y, Hagiwara D, Takahashi-Nakaguchi A, Sakai K, Gonoi T.
  • Journal Title: BMC Genomics Volume: 18 Issue: 1 Pages: 942
  • DOI: 10.1186/s12864-017-4316-z
  • Peer Reviewed / Open Access
• [Journal Article] Evolutionary acquisition of promoter-associated non-coding RNA (pancRNA) repertoires diversifies species-dependent gene activation mechanisms in mammals. (2017)
  • Author(s): Masahiro Uesaka, Kiyokazu Agata, Takao Oishi, Kinichi Nakashima, Takuya Imamura
  • Journal Title: BMC Genomics Volume: 18 Pages: 285
  • DOI: 10.1186/s12864-017-3662-1
  • Peer Reviewed / Open Access
• [Journal Article] Comprehensive evaluation of non-hybrid genome assembly tools for third-generation PacBio long-read sequence data (2017)
  • Author(s): Vasanthan Jayakumar and Yasubumi Sakakibara
  • Journal Title: Briefings in Bioinformatics Pages: bbx147
  • DOI: 10.1093/bib/bbx147
  • Peer Reviewed / Open Access
• [Journal Article] Identification and characterization of a metastatic suppressor BRMSIL as target gene of p53. (2017)
  • Author(s): Koyama R, Tamura M, Nakagaki T, Ohashi T, Idogawa M, Suzuki H, Tokino T, Sasaki Y.
  • Journal Title: Cancer Science Volume: 108 Pages: 2413-2421
  • DOI: 10.1111/cas.13420
  • Peer Reviewed / Open Access
• [Journal Article] Insights into land plant evolution garnered from the Marchantia polymorpha genome (2017)
  • Author(s): Bowman JL, Kohchi T, Yamato KT, Jenkins J, Shu S, Ishizaki K, Yamaoka S, Nishihama R, Nakamura Y, Fujiyama A, Kohara Y, Sugano S, Suzuki Y, 他99名, Schmutz J.
  • Journal Title: Cell Volume: 171 Pages: 287-304
  • DOI: 10.1016/j.cell.2017.09.030
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Light controls protein localization through phytochrome-mediated alternative promoter selection. (2017)
  • Author(s): Ushijima T, Hanada K, Gotoh E, Yamori W, Kodama Y, Tanaka H, Kusano M, Fukushima A, Tokizawa M, Yamamoto YY, Tada Y, Suzuki Y, and Matsushita T
  • Journal Title: Cell Volume: 171 Pages: 1316-1325
  • DOI: 10.1016/j.cell.2017.10.018
  • Peer Reviewed
• [Journal Article] Regnase-1 Maintains Iron Homeostasis via the Degradation of Transferrin Receptor 1 and Prolyl-Hydroxylase-Domain-Containing Protein 3 mRNAs. (2017)
  • Author(s): Yoshinaga, M., Nakatsuka, Y., Vandenbon, A., Ori, D., Uehata, T., Tsujimura, T., Suzuki, Y., Mino, T., Takeuchi, O.
  • Journal Title: Cell Reports Volume: 19 Issue: 8 Pages: 1614-1630
  • DOI: 10.1016/j.celrep.2017.05.009
  • Peer Reviewed / Open Access
• [Journal Article] DNA methylome analysis identifies transcription factor-based epigenomic signatures of multilineage competence in neural stem/progenitor cells. (2017)
  • Author(s): Sanosaka T, Imamura T, Hamazaki N, Chai M, Igarashi K, Ideta-Otsuka M, Miura F, Ito T, Fujii N, Ikeo K, Nakashima K.
  • Journal Title: Cell Reports Volume: 20 Pages: 2992
  • DOI: 10.1016/j.celrep.2017.08.086
  • Peer Reviewed / Open Access
• [Journal Article] An efficient method to generate conditional knockout cell lines for essential genes by combination of auxin-inducible degron tag and CRISPR/Cas9. (2017)
  • Author(s): Nishimura, K and Fukagawa T
  • Journal Title: Chromosome Res. Volume: 25 Pages: 253-260
  • DOI: 10.1007/s10577-017-9559-7
  • Peer Reviewed / Open Access
• [Journal Article] Association of M18BP1/KNL2 with CENP-A Nucleosome Is Essential for Centromere Formation in Non-mammalian Vertebrates. (2017)
  • Author(s): Hori T, Shang WH, Hara M, Ariyoshi M, Arimura Y, Fujita R, Kurumizaka H, Fukagawa T.
  • Journal Title: Dev Cell Volume: 42 Pages: 181-189
  • DOI: 10.1016/j.devcel.2017.06.019
  • Peer Reviewed / Int'l Joint Research
• [Journal Article] Sequencing and phasing cancer mutations in lung cancers using a long-read portable sequencer (2017)
  • Author(s): Ayako Suzuki, Mizuto Suzuki, Junko Mizushima-Sugano, Martin C Frith, Wojciech Makatowski, Takashi Kohno, Sumio Sugano, Katsuya Tsuchihara & Yutaka Suzuki
  • Journal Title: DNA Research Volume: 24 Issue: 6 Pages: 585-596
  • DOI: 10.1093/dnares/dsx027
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Locus-specific ChIP combined with NGS analysis reveals genomic regulatory regions that physically interact with the Pax5 promoter in a chicken B cell line. (2017)
  • Author(s): Fujita, T., Kitaura, F., Yuno, M., Suzuki, Y., Sugano, S., and Fujii, H.
  • Journal Title: DNA Research Volume: 24 Pages: 537-548
  • DOI: 10.1093/dnares/dsx023
  • Peer Reviewed / Open Access
• [Journal Article] Function and evolution of a Lotus japonicus AP2/ERF family transcription factor that is required for development of infection threads. (2017)
  • Author(s): Koji Yano, Seishiro Aoki, Meng Liu, Yosuke Umehara, Norio Suganuma, Wataru Iwasaki, Shusei Sato, Takashi Soyano, Hiroshi Kouchi and Masayoshi Kawaguchi.
  • Journal Title: DNA Research Volume: 24 Pages: 193-203
  • DOI: 10.1093/dnares/dsw052
  • Peer Reviewed / Open Access
• [Journal Article] F4/80+ macrophages contribute to clearance of senescent cells in the mouse postpartum uterus. (2017)
  • Author(s): Egashira M, Hirota Y, Shimizu-Hirota R, Saito-Fujita T, Haraguchi H, Matsumoto L, Matsuo M, Hiraoka T, Tanaka T, 他3名, Maeda KI, Fujii T, Osuga Y
  • Journal Title: Endocrinology Volume: 158 Pages: 2344-2353
  • DOI: 10.1210/en.2016-1886
  • Peer Reviewed
• [Journal Article] Hypomethylated domain-enriched DNA motifs prepattern the accessible nucleosome organization in teleosts (2017)
  • Author(s): Ryohei Nakamura, Ayako Uno, Masahiko Kumagai, Shinichi Morishita and Hiroyuki Takeda
  • Journal Title: Epigenetics & Chromatin Volume: 10 Pages: 44
  • DOI: 10.1186/s13072-017-0152-2
  • Peer Reviewed / Open Access
• [Journal Article] Different contributions of local- and distant-regulatory changes to transcriptome divergence between stickleback ecotypes. (2017)
  • Author(s): Ishikawa, A., Kusakabe, M., Ravinet, M., Yoshida, K., Makino, T., Toyoda, A. Fujiyama, A., and Kitano, J.
  • Journal Title: Evolution Volume: 71 Pages: 565-581
  • DOI: 10.1111/evo.13175
  • Peer Reviewed / Int'l Joint Research
• [Journal Article] An ENU-induced p. C225S missense mutation in the mouse Tgfb1 gene does not cause Camurati-Engelmann disease-like skeletal phenotypes. (2017)
  • Author(s): Ichimura S, Sasaki S, Murata T, Fukumura R, Gondo Y, Ikegawa S, Furuichi T
  • Journal Title: Experimental Animals Volume: 66 Pages: 137-144
  • DOI: 10.1538/expanim.16-0085
  • Peer Reviewed / Open Access
• [Journal Article] Seasonal analysis of microbial communities in precipitation in the Greater Tokyo Area, Japan. (2017)
  • Author(s): Satoshi Hiraoka, Masaya Miyahara, Kazushi Fujii, Asako Machiyama, and Wataru Iwasaki.
  • Journal Title: Frontiers in Microbiology Volume: 8 Pages: 1506
  • DOI: 10.3389/fmicb.2017.01506
  • Peer Reviewed / Open Access
• [Journal Article] Differential binding of three major human ADAR isoforms to coding and long non-coding transcripts. (2017)
  • Author(s): Galipon J, Ishii R, Suzuki Y, Tomita M, Ui-Tei K.
  • Journal Title: Genes(Basel) Volume: 8 Pages: E68
  • DOI: 10.3390/genes8020068
  • Peer Reviewed / Open Access
• [Journal Article] Identification of physical interactions between genomic regions by enChIP-Seq. (2017)
  • Author(s): Fujita, T., Yuno, M., Suzuki, Y., Sugano, S., and Fujii, H.
  • Journal Title: Genes to Cells Volume: 22 Pages: 506-520
  • DOI: 10.1111/gtc.12492
  • Peer Reviewed / Open Access
• [Journal Article] Complete Genome Sequence of Super Biofilm-Elaborating Staphylococcus aureus Isolated in Japan. (2017)
  • Author(s): Yu L, Hisatsune J, Hirakawa H, Mizumachi E, Toyoda A, Yahara K, Sugai M.
  • Journal Title: Genome Announc. Volume: 5 Issue: 41 Pages: e01043-17
  • DOI: 10.1128/genomeA.01043-17
  • Peer Reviewed / Open Access
• [Journal Article] Multiple independent changes in mitochondrial genome conformation in chlamydomonadalean algae. (2017)
  • Author(s): Hamaji, T., Kawai-Toyooka, H., Toyoda, A., Minakuchi, Y., Suzuki, M., Fujiyama, A., Nozaki, H. and Smith, D. R.
  • Journal Title: Genome Biology and Evolution Volume: 9 Pages: 993-999
  • DOI: 10.1093/gbe/evx060
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] A novel UBE2A mutation causes X-linked intellectual disability type Nascimento. (2017)
  • Author(s): Tsurusaki Y, Ohashi I, Enomoto Y, Naruto T, Mitsui J, Aida N, Kurosawa K.
  • Journal Title: Hum Genome Var. Volume: 4 Pages: 17019
  • DOI: 10.1038/hgv.2017.19
  • Peer Reviewed / Open Access
• [Journal Article] The Phagocytic Function of Macrophage-Enforcing Innate Immunity and Tissue Homeostasis. (2017)
  • Author(s): Hirayama D, Iida T, Nakase H.
  • Journal Title: Int J Mol Sci. Volume: 19 Pages: 92
  • DOI: 10.3390/ijms19010092
  • Peer Reviewed / Open Access
• [Journal Article] Evaluation of a novel fluorescent nanobeacon for targeted imaging of Thomsen-Friedenreich associated colorectal cancer. (2017)
  • Author(s): Nakase H, Sakuma S, Fukuchi T, Yoshino T, Mohri K, Miyata K, Kumagai H, Hiwatari KI, Tsubaki K, Ihejima T, Tobita E, 他2名, Washington K, Gore JC, Pham W.
  • Journal Title: Int J Nanomedicine. Volume: 12 Pages: 1747-1755
  • DOI: 10.2147/IJN.S124174
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Constitutive centromere-associated network controls centromere drift in vertebrate cells. (2017)
  • Author(s): Hori T, Kagawa N, Toyoda A, Fujiyama A, Misu S, Monma N, Makino F, Ikeo K, Fukagawa T.
  • Journal Title: J Cell Biol. Volume: 216 Pages: 101-113
  • DOI: 10.1083/jcb.201605001
  • Peer Reviewed / Open Access
• [Journal Article] Phylogeography of the yellowfin goby Acanthogobius flavimanus in native and non-native distributions. (2017)
  • Author(s): Shotaro Hirase, Sherrie Chambers, Kathryn Hassell, Melissa Carew, Vincent Pettigrove, Kiyoshi Soyano, Masaki Nagae, and Wataru Iwasaki.
  • Journal Title: Marine Biology Volume: 164 Pages: 164
  • DOI: 10.1007/s00227-017-3137-6
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Population structure of Escherichia coli 026 : HII with recent and repeated stx2 acquisition in multiple lineages (2017)
  • Author(s): Ogura Y, Gotoh Y, Itoh T, Sato MP, Seto K, Yoshino S, Isobe J, 他9名, Kato Y, Shirahige K, Ooka T, Ishijima N, Lee KI, Iyoda S, Mainil JG, Hayashi T
  • Journal Title: Microb Genom Volume: 3
  • DOI: 10.1099/mgen.0.000141
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] The complete mitochondrial genome sequence and phylogenetic analysis of Luciola lateralis, one of the most famous firefly in Japan (Coleoptera : Lampyridae) (2017)
  • Author(s): Maeda J, Kato D, Arima K, Ito Y, Toyoda A, Noguchi H
  • Journal Title: Mitochondrial DNA Part B Volume: 2 Pages: 546-547
  • DOI: 10.1080/23802359.2017.1365640
  • Peer Reviewed / Open Access
• [Journal Article] The complete mitogenome and phylogenetic analysis of Japanese firefly ‘Genji Botaru’ Luciola cruciata (Coleoptera : Lampyridae) (2017)
  • Author(s): Maeda J, Kato D, Arima K, Ito Y, Toyoda A, Noguchi H
  • Journal Title: Mitochondrial DNA Part B Volume: 2 Pages: 522-523
  • DOI: 10.1080/23802359.2017.1365641
  • Peer Reviewed / Open Access
• [Journal Article] Long-term expansion of alveolar stem cells derived from human iPS cells by forming organoids. (2017)
  • Author(s): Yamamoto Y, Gotoh S, Korogi Y, Seki M, Konishi S, Ikeo S, Sone N, Nagasaki T, Matsumoto H, Muro S, Hirai T, Ito I, Kohno T, Suzuki Y, Mishima M.
  • Journal Title: Nat Methods. Volume: 14 Issue: 11 Pages: 1097-1106
  • DOI: 10.1038/nmeth.4448
  • Peer Reviewed / Open Access
• [Journal Article] Centromere evolution and CpG methylation during vertebrate speciation (2017)
  • Author(s): Ichikawa K, Tomioka S, Suzuki Y, Nakamura R, Doi K, Yoshimura J, Kumagai M, Inoue Y, Uchida Y, Irie N, Takeda H, Morishita S.
  • Journal Title: Nature Communications Volume: 8 Pages: 1833
  • DOI: 10.1038/s41467-017-01982-7
  • Peer Reviewed / Open Access
• [Journal Article] Generalist species drive microbial dispersion and evolution. (2017)
  • Author(s): Sira Sriswasdi, Ching-chia Yang, and Wataru Iwasaki.
  • Journal Title: Nature Communications Volume: 8 Pages: 1162
  • DOI: 10.1038/s41467-017-01265-1
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Complete fusion of a transposon and herpesvirus created the Teratorn mobile element in medaka fish (2017)
  • Author(s): Inoue Y, Saga T, Aikawa T, Kumagai M, Shimada A, Kawaguchi Y, Naruse K, Morishita S, Koga A, Takeda H.
  • Journal Title: Nature Communications Volume: 8 Pages: 551
  • DOI: 10.1038/s41467-017-00527-2
  • Peer Reviewed / Open Access
• [Journal Article] Novel GBEI mutation in a Japanese family with adult polyglucosan body disease (2017)
  • Author(s): Harigaya Y, Matsukawa T, Fujita Y, Mizushima K, Ishiura H, Mitsui J, Morishita S, Shoji M, Ikeda Y, Tsuji S.
  • Journal Title: Neurology Genetics Volume: 3 Issue: 2 Pages: e138
  • DOI: 10.1212/NXG.0000000000000138
  • Peer Reviewed / Open Access
• [Journal Article] Epigenetic silencing of SMOCI in traditional serrated adenoma and colorectal cancer. (2017)
  • Author(s): Aoki H, Yamamoto E, Takasawa A, Niinuma T, Yamano HO, Harada T, Matsushita HO, Yoshikawa K, Takagi R, 他7名, Kai M, Sawada N, Sugai T, Nakase H, Suzuki H.
  • Journal Title: Oncotarget Volume: 9 Pages: 4707-4721
  • DOI: 10.18632/oncotarget.23523
  • Peer Reviewed / Open Access
• [Journal Article] Profiling cancer-related gene mutations in oral squamous cell carcinoma from Japanese patients by targeted amplicon sequencing. (2017)
  • Author(s): Nakagaki T, Tamura M, Kobashi K, Kobashi K, Koyama R, Fukushima H, Ohashi T, Idogawa M, Ogi K, Hiratsuka H, Tokino T, Sasaki Y.
  • Journal Title: Oncotarget Volume: 8 Pages: 59113-59122
  • DOI: 10.18632/oncotarget.19262
  • Peer Reviewed / Open Access
• [Journal Article] Quinone oxidoreductase 2 is involved in haustorium development of the parasitic plant Phtheirospermum japonicum. (2017)
  • Author(s): Ishida JK, Yoshida S, Shirasu K.
  • Journal Title: Plant Signal Behav Volume: 12 Pages: e1319029
  • DOI: 10.1080/15592324.2017.1319029
  • Peer Reviewed / Open Access
• [Journal Article] Unlinking the methylome pattern from nucleotide sequence, revealed by large-scale in vivo genome engineering and methylome editing in medaka fish (2017)
  • Author(s): Napo K. M. Cheung, Ryohei Nakamura, Ayako Uno, Masahiko Kumagai, Hiroto S, Fukushima, Shinichi Morishita, Hiroyuki Takeda
  • Journal Title: PLOS Genetics Volume: 13 Issue: 12 Pages: e1007123
  • DOI: 10.1371/journal.pgen.1007123
  • Peer Reviewed / Open Access
• [Journal Article] RNA-sequencing-based transcriptome and biochemical analyses of steroidal saponin pathway in a completeset of Allium fistulosum-A. cepa monosomic addition lines (2017)
  • Author(s): Abdelrahman M, El-Sayed M, Sato S, Hirakawa H, Ito SI, Tanaka K, Mine Y, Sugiyama N, Suzuki Y, Yamauchi N, Shigyo M.
  • Journal Title: PLoS One Volume: 12 Issue: 8 Pages: e0181784
  • DOI: 10.1371/journal.pone.0181784
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] DEclust : A statistical approach for obtaining differential expression profiles of multiple conditions (2017)
  • Author(s): Aoto Yoshimasa、Hachiya Tsuyoshi、Okumura Kazuhiro、Hase Sumitaka、Sato Kengo、Wakabayashi Yuichi、Sakakibara Yasubumi
  • Journal Title: PLoS One Volume: 12 Pages: e0188285
  • DOI: 10.1371/journal.pone.0188285
  • Peer Reviewed / Open Access
• [Journal Article] Assessment of the quality of DNA from various formalin-fixed paraffin-embedded (FFPE) tissues and the use of this DNA for next-generation sequencing (NGS) with no artifactual mutation. (2017)
  • Author(s): Einaga N, Yoshida A, Noda H, Suemitsu M, Nakayama Y, Sakurada A, Kawaji Y, Yamaguchi H, Sasaki Y, Tokino T, Esumi M.
  • Journal Title: PLoS One Volume: 12 Pages: e0176280
  • DOI: 10.1371/journal.pone.0176280
  • Peer Reviewed / Open Access
• [Journal Article] Inter-species hormonal control of host root morphology by parasitic plants (2017)
  • Author(s): Spallek, T., Melnyk, C. W., Wakatake, T., Zhang, J., Sakamoto, Y., Kiba, T., Yoshida, S., Matsunaga, S., Sakakibara, H., Shirasu, K.
  • Journal Title: PNAS Volume: 114 Pages: 5283-5288
  • DOI: 10.1073/pnas.1619078114
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Multiple common and rare variants of ABCG2 cause gout. (2017)
  • Author(s): Higashino T, Takada T, Nakaoka H, Toyoda Y, Stiburkova B, Miyata H, Ikebuchi Y, Nakashima H, Shimizu S, 他15名, Inoue I, Merriman TR, Shinomiya N, Matsuo H.
  • Journal Title: RMD Open Volume: 3 Pages: e000464
  • DOI: 10.1136/rmdopen-2017-000464
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Genomic structure and evolution of the mating type locus in the green seaweed Ulva partita. (2017)
  • Author(s): Yamazaki T, Ichihara K, Suzuki R, Oshima K, Miyamura S, Kuwano K, Toyoda A, Suzuki Y, Sugano S, Hattori M, Kawano S.
  • Journal Title: Scientific Reports Volume: 7 Issue: 1 Pages: 11679
  • DOI: 10.1038/s41598-017-11677-0
  • Peer Reviewed / Open Access
• [Journal Article] A Comprehensive Mouse Transcriptomic BodyMap across 17 Tissues by RNA-seq. (2017)
  • Author(s): Li B, Qing T, Zhu J, Wen Z, Yu Y, Fukumura R, Zheng Y, Gondo Y, Shi L.
  • Journal Title: Scientific Reports Volume: 7 Pages: 4200
  • DOI: 10.1038/s41598-017-04520-z
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] CRISPR/Cas9-based knockouts reveal that CpRLP1 is a negative regulator of the sex pheromone PR-IP in the Closterium peracerosum-strigosum-littorale complex (2017)
  • Author(s): Kanda, N., Ichikawa, M., Ono, A., Toyoda, A., Fujiyama, A., Abe, J., Tsuchikane, Y., Nishiyama, T., Sekimoto, H.
  • Journal Title: Scientific Reports Volume: 7 Pages: 17873
  • DOI: 10.1038/s41598-017-18251-8
  • Peer Reviewed / Open Access
• [Journal Article] Serotyping dengue virus with isothermal amplification and a portable sequencer. (2017)
  • Author(s): Yamagishi J, Runtuwene LR, Hayashida K, Mongan AE, Thi LAN, Thuy LN, Nhat CN, Limkittikul K, 他2名, Frith M, Makalowski W, Eshita Y, Sugano S, Suzuki Y.
  • Journal Title: Scientific Reports Volume: 7 Pages: 3510
  • DOI: 10.1038/s41598-017-03734-5
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Direct estimation of de novo mutation rates in a chimpanzee parent-offspring trio by ultra-deep whole genome sequencing (2017)
  • Author(s): Tatsumoto S, Go Y, Fukuta K, Noguchi H, Hayakawa T, Tomonaga M, Hirai H, Matsuzawa T, Agata K, Fujiyama A
  • Journal Title: Scientific Reports Volume: 7 Pages: 13561
  • DOI: 10.1038/s41598-017-13919-7
  • Peer Reviewed / Open Access
• [Journal Article] Independent effects of ADH1B and ALDH2 common dysfunctional variants on gout risk. (2017)
  • Author(s): Sakiyama M, Matsuo H, Akashi A, Shimizu S, Higashino T, Kawaguchi M, 他3名, Nakashima H, Sakurai Y, Ichida K, Shimizu T, Ooyama H, Shinomiya N.
  • Journal Title: Scientific Reports Volume: 7 Pages: 2500
  • DOI: 10.1038/s41598-017-02528-z
  • Open Access
• [Journal Article] Regnase-1 and Roquin Nonredundantly Regulate Thl Differentiation Cansing Cardiac Inflammation and Fibrosis. (2017)
  • Author(s): Cui, X., Mino, T., Yoshinaga, M., Nakatsuka, Y., Hia, F., Yamasoba, D., Tsujimura, T., Tomonaga, K., Suzuki, Y., Uehata, T., Takeuchi, O.
  • Journal Title: The Journal of Immunology Volume: 199 Issue: 12 Pages: 4066-4077
  • DOI: 10.4049/jimmunol.1701211
  • Peer Reviewed
• [Journal Article] An emerging model organism Caenorhabditis elegans for alternative pre-mRNA processing in vivo. (2017)
  • Author(s): Shotaro Wani, Hidehito Kuroyanagi
  • Journal Title: Wiley Interdiscip Rev RNA Volume: 8 Pages: E1428
  • DOI: 10.1002/wrna.1428
  • Peer Reviewed / Open Access
• [Journal Article] A Trichosporonales genome tree based on 27 haploid and three evolutionarily. (2017)
  • Author(s): Masako Takashima, Sira Sriswasdi, Ri-ichiroh Manabe, Moriya Ohkuma, Takashi Sugita, and Wataru Iwasaki.
  • Journal Title: Yeast Volume: 35 Pages: 99-111
  • DOI: 10.1002/yea.3284
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] A sodium binding system alleviates acute salt stress during seawater acclimation in eels. (2017)
  • Author(s): Marty Kwok Shing Wong, Takehiro Tsukada, Nobuhiro Ogawa, Supriya Pipil, Haruka Ozaki, Yutaka Suzuki, Wataru Iwasaki, and Yoshio Takei.
  • Journal Title: Zoological Letters Volume: 3 Pages: 22
  • DOI: 10.1186/s40851-017-0081-8
  • Peer Reviewed / Open Access
• [Journal Article] 神経幹細胞の運命制御におけるIncRNAの役割 (2017)
  • Author(s): 木下隆太、岸雄介、後藤由季子
  • Journal Title: 医薬ジャーナル, Clinical Calcium Volume: 27 Issue: 6
• [Journal Article] 変異蓄積モデルを利用した生殖系列変異の後世代影響の解析 (2017)
  • Author(s): 内村有邦、樋口真弓、八木健
  • Journal Title: 放射線生物研究 Volume: 52 Issue: 4 Pages: 402, 415
  • Peer Reviewed
• [Presentation] Endophyte-mediated control of fungal pathogenesis in Arabidopsis thaliana (2018)
  • Author(s): Kuldanai Pathompitaknukul
  • Organizer: 5th Plant Genomics & Gene Editing Congress Asia
  • Int'l Joint Research / Invited
• [Presentation] Volvocine green algae inviting you to 200 MYA time travel for evolution of female-male and muticellularity (2018)
  • Author(s): Nozaki, H.
  • Organizer: Biology Colloquium hosted by Graduate Students' Society, Department of Biological Sciences, Faulty of Science, National University of Singapore
  • Int'l Joint Research / Invited
• [Presentation] DNA polymerase usage and mutagenesis (2018)
  • Author(s): 大学保一
  • Organizer: Indo-Japan conference on Epigenetics and human Disease
  • Int'l Joint Research / Invited
• [Presentation] Epigenetic regulation on centromere soecification and kinetochore assembly (2018)
  • Author(s): Tatsuo Fukagawa
  • Organizer: Indo-Japan conference on Epigenetics and Human disease
  • Int'l Joint Research / Invited
• [Presentation] Comprehensive phenotype characterization of colon cancer with various combination of driver mutations (2018)
  • Author(s): Oshima M
  • Organizer: International Conference of Asian Pacific Organization for Cancer Prevention (APOCP9)
  • Int'l Joint Research / Invited
• [Presentation] Comprehensive phenotype characterization of intestinal tumors with various driver mutations (2018)
  • Author(s): Oshima M
  • Organizer: International Society of Precision Cancer Medicine (ISPCM) Annual Meeting
  • Int'l Joint Research / Invited
• [Presentation] What determines differences in regenerative abilities between mice and newts? (2018)
  • Author(s): T. Takeuchi
  • Organizer: International Symposium on Regenerative Medicine at Nagasaki University
  • Int'l Joint Research / Invited
• [Presentation] Dissection of elements and machinery of architectural noncoding RNAs (2018)
  • Author(s): Tetsuro Hirose
  • Organizer: Keystone Symposia (Noncoding RNAs : Form, Function, Physiology)
  • Int'l Joint Research / Invited
• [Presentation] Phenotypic diversity and constraints in microbial adaptive evolution (2018)
  • Author(s): Chiara Furusawa
  • Organizer: Les Houches School “Evolution of Diversity”
  • Int'l Joint Research / Invited
• [Presentation] Silkworm infection model to investigate the staphylococcal virulence system (2018)
  • Author(s): Chikara Kaito
  • Organizer: Workshop to Understand Staphylococcus aureus Pathogenesis
  • Int'l Joint Research / Invited
• [Presentation] Establishment of Newt model using Iberian Ribbed Newt (Pleurodeles waltl) for Regeneration Research and more. (2018)
  • Author(s): T. Hayashi, Mie Nakajima, M. Kyakuno, I. Manabe, K. Doi, and T. Takeuchi
  • Organizer: 広島大学両生類研究センター国際シンポジウム
  • Int'l Joint Research / Invited
• [Presentation] An algorithm for assembling human centromeres from long reads (2018)
  • Author(s): Yuta Suzuki
  • Organizer: ADVANCES IN GENOME BIOLOGY AND TECHNOLOGY (AGBT)
  • Int'l Joint Research
• [Presentation] Finding tandem repeat expansions in raw long reads (2018)
  • Author(s): Shinichi Morishita
  • Organizer: ADVANCES IN GENOME BIOLOGY AND TECHNOLOGY (AGBT)
  • Int'l Joint Research
• [Presentation] Personal diploid methylomes and transcriptomes via phased heterozygous variants and single-molecule real-time sequencing (2018)
  • Author(s): Yuta Suzuki
  • Organizer: ADVANCES IN GENOME BIOLOGY AND TECHNOLOGY (AGBT)
  • Int'l Joint Research
• [Presentation] Characterization of aberrant transcriptional regulations in lung cancers (2018)
  • Author(s): Ayako Suzuki, Sarun Sereewattanawoot, Yutaka Suzuki & Katsuya Tsuchihara
  • Organizer: Advances in Genome Biology and Technology (AGBT) 2018 General Meeting
  • Int'l Joint Research
• [Presentation] Functional Genomics on Medicinal Plants (2018)
  • Author(s): Amit Rai, Kazuki Saito and Mami Yamazaki
  • Organizer: International Plant and Animal Genome XXVI, San Diego
  • Int'l Joint Research
• [Presentation] Identifying heterogeneity of ground state pluripotency in mouse embryonic stem cells (2018)
  • Author(s): Kyoji Horie(堀江恭二)
  • Organizer: International Society for Stem Cell Research 2018 Annual Meeting
  • Int'l Joint Research
• [Presentation] Differences of canopy environment and stomatal conductance in sugar beet (Beta vulgaris) (2018)
  • Author(s): Usui Y., Hirota T., Kuwagata T., Taniguchi K., and Hirafuji M.
  • Organizer: International Symposium on Agricultural Meteorology 2018
  • Int'l Joint Research
• [Presentation] Rice production, water use, and atmospheric feedbacks (2018)
  • Author(s): Ikawa, H.
  • Organizer: International Symposium on Agricultural Meteorology 2018
  • Int'l Joint Research
• [Presentation] Chromatin regulation of neural stem cell fate during neocortical development (2018)
  • Author(s): Yusuke Kishi, Yukiko Gotoh
  • Organizer: International Young Scientists Workshop on Neural Development and Stem Cells
  • Int'l Joint Research
• [Presentation] High-Throughput SNP Discovery and Genotyping in Unique Genetic Stocks for Constructing a High Resolution Genetic Linkage Map of Allium cepa (2018)
  • Author(s): Masayoshi Shigyo, Shusei Sato, Hideki Hirakawa
  • Organizer: Plant & Animal Genome Conference XXVI
  • Int'l Joint Research
• [Presentation] MarpolBase : Construction of the Marchantia polymorpha Genome Database (2018)
  • Author(s): Takako Mochizuki, Yasuhiro Tanizawa, Hideki Nagasaki, Shohei Yamaoka, Ryuichi Nishihama, Takehiko Kanazawa, Takashi Ueda, Katsuyuki T. Yamato, Takayuki Kohchi, and Yasukazu Nakamura
  • Organizer: Plant and Animal Genome XXVI
  • Int'l Joint Research
• [Presentation] Studies on skeletal muscle atrophy in space - what zebrafish experienced in a space tour. (2018)
  • Author(s): Fuminori Sato, Choi Minyong, Zi Wang, Quan Wu, Ikumi Fujita, Misato Iwase, Satoko Uchida, Toru Sakimura, Yasushi Kono, Masaki Shirakawa, Fumiaki Tanigaki, Masahiro Chatani, Akira Kudo, Akihisa Takahashi, Junya Kobayashi, Kiyomi Imamura, Terumi Horiuchi, Satoshi Furukawa, Tadashi Muratani, Sumio Sugano, Yutaka Suzuki, Fumio Matsuzaki, Koichi Kawakami, and Atsuko Sehara-Fujisawa.
  • Organizer: CDB Symposium
  • Int'l Joint Research
• [Presentation] Development of a New Pipeline for Haplotype-Specific Expression : case-study in F1 reciprocal cross in pepper (2018)
  • Author(s): Andrea Ghelfi, Kenta Shirasawa, Sachiko Isobe, Munetaka Hosokawa
  • Organizer: Intelligent Systems for Molecular Biology (ISMB) Conference
  • Int'l Joint Research
• [Presentation] Developmental stage-dependent change of SMAD target genes defines the neural stem cell fate (2018)
  • Author(s): SAYAKO KATADA
  • Organizer: NCU Global Young Investigator forum 2018
  • Invited
• [Presentation] Developing tools and database for microbial community analysis (2018)
  • Author(s): Mori H.
  • Organizer: マイクロバイオーム研究開発の最前線
  • Invited
• [Presentation] 頭部神経系と栄養貯藏組織における栄養応答システムの協調機構の解明 (2018)
  • Author(s): 福山征光
  • Organizer: 金沢大学新学術創成研究機構 革新的統合バイオ研究コア 栄養・代謝研究ワークショップ
  • Invited
• [Presentation] 大腸菌進化実験を用いた進化的拘束の解析 (2018)
  • Author(s): 古澤力
  • Organizer: 生命の起源および進化学会第43回学術講演会
  • Invited
• [Presentation] Integrated analysis of genomic and transcriptomic data in ovarian clear cell carcinoma (2018)
  • Author(s): Kosuke Yoshihara
  • Organizer: 第70回日本産科婦人科学会学術講演会 日韓台ジョイントシンポジウム
  • Invited
• [Presentation] エミュー(Dromaius novaehollandiae)を用いた性決定遺伝子の探索 (2018)
  • Author(s): 櫻井珠真呂、水島秀成、黒岩麻里
  • Organizer: 鳥ゼミ北海道セミナー
  • Invited
• [Presentation] Regulation of surface expression dynamics of AMPA receptors and cognitive refinement processes by Arc. (2018)
  • Author(s): Okuno H, Ishii Y, Endo T, Minatohara K, Bito H.
  • Organizer: 日本生理学会
  • Invited
• [Presentation] アゲハチョウの擬態に関わる色と紋様の進化 (2018)
  • Author(s): 藤原晴彦
  • Organizer: 日本農芸化学会2018
  • Invited
• [Presentation] キンギョを用いた眼の形成機構の解明 (2018)
  • Author(s): 大森義裕
  • Organizer: 平成29年度蛋白研セミナー一網膜感覚研究のフロンティア
  • Invited
• [Presentation] 10X-Linked-reads、Mate-pairを活用したメタゲノムアセンブリ手法の開発 (2018)
  • Author(s): 梶谷 嶺, 小椋 義俊, 後藤 恭宏, 林 哲也, 伊藤 武彦
  • Organizer: 第12回ゲノム微生物学会
• [Presentation] Allium cepaにおける全ゲノム解読に向けた取り組みについて (2018)
  • Author(s): 執行正義・Mostafa Abdelrahman・佐藤修正・平川英樹・辻村真衣・寺地徹・豊田敦
  • Organizer: 園芸学会平成30年度春季大会
• [Presentation] 食道癌患者におけるCirculating tumor DNAモニタリングシステムの検討 (2018)
  • Author(s): 岩谷 岳、遠藤 史隆、秋山 有史、千葉 丈広、馬場 誠朗、梅邑 晃、二階 春香、佐藤 慧、八重樫 瑞典、川岸 涼子、松尾 鉄平、木村 聡元、高原 武志、大塚 幸喜、新田 浩幸、水野 大、肥田 圭介、西塚 哲、佐々木 章
  • Organizer: 第118回日本外科学会学術集会
• [Presentation] Integrative Omics approach to elucidate camptothecin biosynthesis (2018)
  • Author(s): Amit Rai, Ryo Nakabayashi, Taiki Nakaya, Tetsuya Mori, Hideyuki Suzuki, Kazuki Saito and Mami Yamazaki
  • Organizer: 第59回日本植物生理学会年会
• [Presentation] 糸状菌Colletotrichum tofieldiaeの種内比較から明らかになったColletotrichum属菌の多様な宿主感染様式 (2018)
  • Author(s): 晝間敬、杉田亮平、田野井慶太朗、佐藤豊三、西條雄介
  • Organizer: 日本植物病理学会
• [Presentation] Colletotrichum endophyte-mediated control of fungal pathogenesis in Arabidopsis thaliana (2018)
  • Author(s): 西條 雄介
  • Organizer: 平成30年日本植物病理学会大会
• [Presentation] ホウレンソウの雄決定遺伝子座周辺から見出された組換抑制領域の分子構造 (2018)
  • Author(s): 小野寺康之, 工藤友裕, 髙橋光彦, 長部高之, 豊田敦, 平川英樹, 鈴木穣, 近江戸伸子
  • Organizer: 園芸学会
• [Presentation] 線虫の温度馴化多様性と低温馴化を制御するK+チャネルの解析 (2018)
  • Author(s): 岡畑美咲、Aguan D. Wei、水口洋平、豊田敦、太田茜、久原篤
  • Organizer: 温度生物学若手の会
• [Presentation] 正常な神経発生を破綻させて、発癌を引き起こす遺伝子の網羅的な探索 (2018)
  • Author(s): 高祖 秀登
  • Organizer: 次世代脳プロジェクト 冬のシンポジウム2017
• [Presentation] Role and priming activity of Kmt2b for the spermatogonial stem cell epigenome. (2018)
  • Author(s): Tomizawa S, Kobayashi Y, Shirakawa T, Hoshi I, Nakajima K, Royo H, Peters AHFM, Anastassiadis K, Stewart AF, Ohbo K.
  • Organizer: 第123回日本解剖学会総会全国学術集会
• [Presentation] ライブラリ調製キット間におけるシーケンスバイアスの比較 (2018)
  • Author(s): 佐藤光彦, 小椋義俊, 中村佳司, 西田留梨子, 後藤恭宏, 林将大, 久恒順三, 菅井基行, 伊藤武彦, 林哲也
  • Organizer: 第12回日本ゲノム微生物学会
• [Presentation] Assessing the diversity of the Megaviridae giant viruses based on DNA polymerase gene. (2018)
  • Author(s): 李岩沢, Hingamp H., 綿井博康, Blanc-Mathieu R., 吉田天士, 緒方博之
  • Organizer: 第12回日本ゲノム微生物学会年会
• [Presentation] Optimization of a DNA barcode method for a giant virus family. (2018)
  • Author(s): Prodinger F., 李岩沢, 森本大地, 大前公保, 富永賢人, Hingamp P., 吉田天士, 後藤康宏, 緒方博之
  • Organizer: 第12回日本ゲノム微生物学会年会
• [Presentation] 全自動培養システムを用いた多種ストレス環境下における大腸菌の大規模実験室進化 (2018)
  • Author(s): 前田智也, 堀之内貴明, 阪田奈津江, 小谷葉月, 酒井亜季, 田邊久美, 古澤力
  • Organizer: 第12回日本ゲノム微生物学会年会
• [Presentation] 微生物ゲノムアノテーションツールDFASTの開発 (2018)
  • Author(s): 谷沢靖洋、藤澤貴智、中村保一
  • Organizer: 第12回日本ゲノム微生物学会年会
• [Presentation] クロマチン高次ドメイン構造分断機構の解明とiPS細胞におけるその応用 (2018)
  • Author(s): 辻村太郎、高瀬敦、吉川真弘、佐野悦子、高戸毅、林松彦、豊田敦、岡野栄之、菱川慶一
  • Organizer: 第17回日本再生医療学会総会
• [Presentation] MarpolBase : ゼニゴケゲノムデータベースの構築 (2018)
  • Author(s): 望月孝子、谷澤靖洋、長崎英樹、山岡尚平、西浜竜一、金澤建彦、上田貴志、大和勝幸、河内孝之、中村保一
  • Organizer: 第59回日本植物生理学会年会(札幌)
• [Presentation] カメムシと仲良くなった大腸菌は何が変わったのか? (2018)
  • Author(s): 古賀隆一
  • Organizer: 第62回日本応用動物昆虫学会大会
• [Presentation] 翅形成遺伝子群は昆虫の背板縁形成に機能する (2018)
  • Author(s): 大出高弘・三戸太郎・新美輝幸
  • Organizer: 第62回日本応用動物昆虫学会大会
• [Presentation] ライブラリ調製キット間におけるシーケンスバイアスの比較 (2018)
  • Author(s): 佐藤光彦, 小椋義俊, 中村佳司, 西田留梨子, 後藤恭宏, 林将大, 久恒順三, 菅井基行, 伊藤武彦, 林哲也
  • Organizer: 第91回日本細菌学会
• [Presentation] 野外群落環境における水稲根の水と窒素の吸収に関連する遺伝子の発現動態 (2018)
  • Author(s): 松波麻耶, 羽田野麻理, 林秀洋, 桑形恒男, 石川淳子
  • Organizer: 日本作物学会第245回講演会
• [Presentation] 「クテドノバクテリア(綱)」のゲノム解析が明かにした新規二次代謝産物生合成の潜在能力 (2018)
  • Author(s): 鄭 宇、豊田 敦、水口 洋平、王 瓊渼、酒井 康輝、阿部 敬悦、横田 明、矢部 修平
  • Organizer: 日本農芸化学会2018年度 年次大会
• [Presentation] トウガラシにおける種間交雑障壁に関与する遺伝子の探索 (2018)
  • Author(s): 梅林綾香・白澤健太・安井康夫・小枝壮太・山崎 彬・細川宗孝
  • Organizer: 園芸学会
• [Presentation] Mouse genetics toward functional analysis. (2017)
  • Author(s): Shigeru Makino, Yoichi Gondo
  • Organizer: 2017 RIKEN MARC KMPC Workshop
  • Int'l Joint Research / Invited
• [Presentation] Enhancer trapping and calcium imaging reveal functional neuronal circuitries essential for fish behaviors. (2017)
  • Author(s): Kawakami, K.
  • Organizer: 2nd Malaysia Zebrafish Disease Model Workshop.
  • Int'l Joint Research / Invited
• [Presentation] Sweetpotato genome sequencing under TRAS collaboration (2017)
  • Author(s): TRAS Sweetpotato genome sequencing consortium(発表者・磯部祥子)
  • Organizer: 4th Plant Genomics Congress Asia
  • Int'l Joint Research / Invited
• [Presentation] Genetic analysis of gout : GWAS and candidate gene analysis. (2017)
  • Author(s): Hirotaka Matsuo
  • Organizer: 7th Oriental Gout Symposium
  • Int'l Joint Research / Invited
• [Presentation] Detection and analysis of spontaneous mutations in the standard mouse strain by complete outbreeding. (2017)
  • Author(s): Fukumura R, Kotaki H, Ishitsuka Y, Makino S, Nakai Y, Mori K, Toyoda A, Kuhara S, Fujiyama A, Gondo Y
  • Organizer: Advanced Geome Science International Symposium ; The Start of New Genomics.
  • Int'l Joint Research / Invited
• [Presentation] Illegitimate translation from out-of-frame alleles created by CRISPR-Cas9 rescues KO lethality. (2017)
  • Author(s): Shigeru Makino, Kimiko Inoue, Masaru Tamura, Michiko Hirose, Yuichi Ishitsuka, Ryutaro Fukumura, Shigeru Wakana, Atsuo Ogura, Yoichi Gondo
  • Organizer: AMMRA and AMPC Meeting 2017
  • Int'l Joint Research / Invited
• [Presentation] Molecular subtypes and evolution of colon cancer (2017)
  • Author(s): Oshima M
  • Organizer: Annual Meeting of Singapore Gastric Cancer Consortium(SGCC)
  • Int'l Joint Research / Invited
• [Presentation] Study of cardiac regeneration using new model newt Pleurodeles waltl. (2017)
  • Author(s): Toshinori Hayashi, Ayumi Myouga, Eri Tsuchiya, Shohei Azuma Yukio Sato and Takashi Takeuchi
  • Organizer: Annual meeting of the Japanese Society of Developmental Biologists
  • Int'l Joint Research / Invited
• [Presentation] Metabolic regulation of RNA modification associated with human disease (2017)
  • Author(s): Tsutomu Suzuki
  • Organizer: Cold Spring Harbor Asia "RNA modification and epitranscriptome"
  • Int'l Joint Research / Invited
• [Presentation] Emergence of embryonic origin of adult neural stem cells (2017)
  • Author(s): Yukiko Gotoh
  • Organizer: EMBO Conference
  • Int'l Joint Research / Invited
• [Presentation] Gene regulatory mechanisms in neural fate decisions (2017)
  • Author(s): Yukiko Gotoh
  • Organizer: EMBO Conference
  • Int'l Joint Research / Invited
• [Presentation] Molecular pathogenesis of mitochondrial disease caused by tRNA modification deficiency (2017)
  • Author(s): Tsutomu Suzuki
  • Organizer: FASEB science research conferences-Mitochondrial Biogenesis and Dynamics in Health, Disease and Aging
  • Int'l Joint Research / Invited
• [Presentation] Role of Nanos Proteins in Male Germ Cell Development (2017)
  • Author(s): Yumiko Saga
  • Organizer: Gordon Research Conference
  • Int'l Joint Research / Invited
• [Presentation] Genetics and genomics with mouse mutagenesis. (2017)
  • Author(s): Yoichi Gondo
  • Organizer: IMB Seminar/Molecular & Celllular Biology Program
  • Int'l Joint Research / Invited
• [Presentation] Metabolic regulation of tRNA modification associated with human disease (2017)
  • Author(s): Tsutomu Suzuki
  • Organizer: IMB symposium on Nucleic Acid Modification
  • Int'l Joint Research / Invited
• [Presentation] Malignant progression of colon cancer through genetic alterations associated with microenvironment generation (2017)
  • Author(s): Oshima M
  • Organizer: International Conference of International Society of Gastrointestinal Carcinogenesis(ISGC)
  • Int'l Joint Research / Invited
• [Presentation] Molecular biological and genomics approach to reveal the genetic mechanism and evolution of Batesian mimicry supergene in Papilio butteflies. (2017)
  • Author(s): Fujiwara, H.
  • Organizer: International Workwho “Butterfly as Genomic Models in Ecology and Evoution”
  • Int'l Joint Research / Invited
• [Presentation] Regulation of neural stem cell fate during development and in the adult (2017)
  • Author(s): Yukiko Gotoh
  • Organizer: Italian Society for Neuroscience (SINS) Annual Meeting
  • Int'l Joint Research / Invited
• [Presentation] Epigenetic control of neural precursor cell fate (2017)
  • Author(s): Yukiko Gotoh
  • Organizer: Keystone Symposia, Regenerative Biology and Applications
  • Int'l Joint Research / Invited
• [Presentation] The amygdalar and hippocampal functions in zebrafish The 2017 workshop on Zebrafish (2017)
  • Author(s): Kawakami, K.
  • Organizer: Neural Circuits and Behavior
  • Int'l Joint Research / Invited
• [Presentation] IRF Transcription factors in the development and function of mononuclear phagocytes (2017)
  • Author(s): Tamura T
  • Organizer: NIH symposium
  • Int'l Joint Research / Invited
• [Presentation] SMRT sequencing for understanding centromeres, meta-methylome, and meta-mobilome (2017)
  • Author(s): Shinichi Morishita
  • Organizer: SMRT SCIENTIFIC SYMPOSIUM
  • Int'l Joint Research / Invited
• [Presentation] The neuronal circuitry for prey capture in zebrafish : from visual stimuli to the hypothalamic feeding center. (2017)
  • Author(s): Kawakami, K.
  • Organizer: The 10th Zebrafish Disease Models Conference
  • Int'l Joint Research / Invited
• [Presentation] Post-transcriptional regulation of inflammation-related mRNAs by Regnase-1. (2017)
  • Author(s): Mino, T.
  • Organizer: The 12th International Symposium of the Institute Network -Driving Next-Generation Medicine : the Spirit of Pioneering Discovery in Medical Science-.
  • Int'l Joint Research / Invited
• [Presentation] Understanding centromeres, metamethylome, and metamobilome using long read sequencing (2017)
  • Author(s): Shinichi Morishita
  • Organizer: The 12th International Workshop on Advanced Genomics
  • Int'l Joint Research / Invited
• [Presentation] GENOMES AND GENEYICS OF PARASITIC PLANTS IN OROBANCHACEAE (2017)
  • Author(s): Satoko Yoshida
  • Organizer: The 14th World Congress on Parasitic Plants
  • Int'l Joint Research / Invited
• [Presentation] Molecular mechanisms underlying color vision and color formation in dragonflies. (2017)
  • Author(s): Futahashi Ryo
  • Organizer: The 29th CDB Meeting "Mavericks, new models in developmental biology".
  • Int'l Joint Research / Invited
• [Presentation] Diversity and biogeography of marine giruses and their association with the biological carbon pump. (2017)
  • Author(s): Blanc-Mathieu R., Li Y., Kaneko H., Endo H., Ogata H.
  • Organizer: The 3rd Ringberg Symposium on Giant Virus Biology
  • Int'l Joint Research / Invited
• [Presentation] Enhancer trapping and calcium imaging reveal a functional neuronal circuit essential for the prey capture behavior : from visual stimuli to the hypothalamic feeding center. (2017)
  • Author(s): Kawakami, K.
  • Organizer: The 5th Zebrafish Research Conference of China
  • Int'l Joint Research / Invited
• [Presentation] New insights into the sexual reproduction in unicellular zygnematophycean alga, Closterium peracerosum-strigosum-littorale complex (2017)
  • Author(s): Sekimoto, H.
  • Organizer: The 65th NIBB Conference Marchantia Workshop 2017
  • Int'l Joint Research / Invited
• [Presentation] Towards unveiling pivotal roles of viruses in marine ecosystems. (2017)
  • Author(s): Ogata H., Blanc-Mathieu R., Hingamp P., Nishimura Y., Li Y., Yoshida T.
  • Organizer: The 73rd Fujibara Seminar, International Conference “Molecular Life of Diatoms”
  • Int'l Joint Research / Invited
• [Presentation] How do microbes spread across environmental barriers? (2017)
  • Author(s): Wataru Iwasaki
  • Organizer: The 9th Asian Symposium on Microbial Ecology
  • Int'l Joint Research / Invited
• [Presentation] Egg or sperm : how germ cell sex is determined. (2017)
  • Author(s): Yumiko Saga
  • Organizer: The International Research Symposium on Regulation of Germ cell Development in vivo and in vitro
  • Int'l Joint Research / Invited
• [Presentation] Primordial follicles : insights from a study of RNA-binding proteins for its development and activation (2017)
  • Author(s): Yuzuru Kato
  • Organizer: The International Research Symposium on Regulation of Germ cell Development in vivo and in vitro
  • Int'l Joint Research / Invited
• [Presentation] New approach toward elucidation of the mechanisms for PGC determination in amphibian newts. (2017)
  • Author(s): Toshinori Hayashi, Mitsuki Kyakuno, and Takashi Takeuchi
  • Organizer: The International Research Symposium on Regulation of Germ cell development in vivo and in vitro
  • Int'l Joint Research / Invited
• [Presentation] Growth factor signaling controls breast cancer stem-like cells and their niche (2017)
  • Author(s): Gotoh N
  • Organizer: The Korean Sciety for Biochemistry and Molecular Biology (KSBMB) International Conference 2017
  • Int'l Joint Research / Invited
• [Presentation] egulation of astrocyte production in the mouse neocortex (2017)
  • Author(s): Yukiko Gotoh
  • Organizer: XIII European Meeting on Glial Cells in Hearlth and Disease
  • Int'l Joint Research / Invited
• [Presentation] Sweetpotato genome sequencing under TRAS collaboration (2017)
  • Author(s): TRAS Sweetpotato genome sequencing consortium(発表者・磯部祥子)
  • Organizer: XIX international botanial cogress
  • Int'l Joint Research / Invited
• [Presentation] Comprehensive phenotypic characterization of intestinal cancer with multiple driver mutations (2017)
  • Author(s): Oshima M
  • Organizer: 第48回高松宮妃癌研究基金国際シンポジウム
  • Int'l Joint Research / Invited
• [Presentation] CpMinusl, mt-genome specific gene of heterothallic Closterium peracerosum-strigosum-littorale complex, is involved in the sex determination (2017)
  • Author(s): Tsuyuki, N., Komiya, A., Kanda, N., Tsuchikane, Y., Nishiyama, T., Sekimoto, H.
  • Organizer: 11th International Phycological Congress
  • Int'l Joint Research
• [Presentation] CRISPR/CAS9-induced knockout in unicellular zygnematophycean alg, Closterium peracerosum-strigosum-littorale complex (2017)
  • Author(s): Kanda, N., Tsuyuki, N., Kon, S., Nishiyama, T., Tsuchikane, Y., Sekimoto, H.
  • Organizer: 11th International Phycological Congress
  • Int'l Joint Research
• [Presentation] Functional analyses of sex specific receptor-like proteins in Closterium peracerosum-strigosum-littorale complex, using CRISPR/CAS9 system (2017)
  • Author(s): Sekimoto, H., Kanda, N., Kon, S., Nishiyama, T., Tsuchikane, Y.
  • Organizer: 11th International Phycological Congress
  • Int'l Joint Research
• [Presentation] Activated IL6-STAT3 pathway in adenomyosis. (2017)
  • Author(s): Hirota Y, Hiraoka T, Saito-Fujita T, Harada M, Fujii T, Osuga Y.
  • Organizer: 13th World Congress of Endometriosis
  • Int'l Joint Research
• [Presentation] Identification of a novel HIV-1 restriction factor which selectively degrades viral transcripts. (2017)
  • Author(s): Yamasoba, D., Sato, K., Uehata, T., Mino, T., Koyanagi, Y., Takeuchi, O.
  • Organizer: 18th Kumamoto AIDS seminar.
  • Int'l Joint Research
• [Presentation] Semaphorin signal via MICAL3 induces symmetrical cell division of cancer stem-like cells (2017)
  • Author(s): Gotoh N
  • Organizer: 2017 AACR Annual Meeting, Symposium “Tumor Stem Cell Biology”
  • Int'l Joint Research
• [Presentation] Rs671, a common variant of ALDH2, could play a protective role in the onset of gout. (2017)
  • Author(s): Mako Komatsu, Hirotaka Matsuo, Masayuki Sakiyama, Hirofumi Nakaoka, Sayo Kawai, Rieko Okada, Yuki Tanahashi, Hiroshi Ooyama, Seiko Shimizu, Nariyoshi Shinomiya
  • Organizer: 21st International Epidemiological Association (IEA) World Congress of Epidemiology
  • Int'l Joint Research
• [Presentation] Natural variations of cold acclimation and analysis of KQT potassium channel in cold acclimation (2017)
  • Author(s): Misaki Okahata, Akane Ohta, Yohei Minakuchi, Atsushi Toyoda, Atsushi Kuhara
  • Organizer: 21th C. elegans International conference
  • Int'l Joint Research
• [Presentation] Isolation of genes required for cold acclimation (2017)
  • Author(s): Mayu Fujita, Shiori Sakai, Misaki Okahata, Yohei Minakuchi, Atsushi Toyoda, Akane Ohta, Atsushi Kuhara.
  • Organizer: 21th C. elegans International meeting
  • Int'l Joint Research
• [Presentation] What is the key developmental change for insect wing evolution? (2017)
  • Author(s): Ohde, T., Mito, T. and Niimi, T.
  • Organizer: 2nd Biennial Meeting of Pan-American Society for Evolutionary Developmental Biology
  • Int'l Joint Research
• [Presentation] SonicParanoid : extremely fast, easy and accurate orthology inference. (2017)
  • Author(s): Salvatore Cosentino and Wataru Iwasaki
  • Organizer: 5th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB) & 16th European Conference on Computational Biology (ECCB)
  • Int'l Joint Research
• [Presentation] Genome-informed isolation of nitrite oxidizer Nitrotoga sp. (2017)
  • Author(s): Kento Ishii, Hirotsugu Fujitani, Tatsunori Nakagawa, Reiji Takahashi, Satoshi Tsuneda
  • Organizer: 5th International Conference on Nitrification
  • Int'l Joint Research
• [Presentation] Genome-wide association study of clinically defined gout and subtypes identifies multiple susceptibility loci including transporter genes. (2017)
  • Author(s): Hirotaka Matsuo, Nakayama Akiyoshi, Hirofumi Nakaoka, Ken Yamamoto, Masayuki Sakiyama, Amara Shaukat, Yu Toyoda, Yukinori Okada, Yoichiro Kamatani, Masahiro Nakatochi, Takahiro Nakamura, Tappei Takada, Katsuhisa Inoue, Hiroshi Nakashima, Seiko Shimizu, Kawaguchi Makoto, Asahi Hishida, Kenji Wakai, Blanka Stiburkova, Lisa K. Stamp, Nicola Dalbeth, Tatsuo Hosoya, Ituro Inoue, Atsushi Takahashi, Michiaki Kubo, Hiroshi Ooyama, Toru Shimizu, Kimiyoshi Ichida, Tony R. Merriman, Nariyoshi Shinomiya
  • Organizer: 67th Annual Meeting of the American Society of Human Genetics
  • Int'l Joint Research
• [Presentation] Exome sequencing of cancer -related genes to identify genetic markers for sensitivity to cytotoxic anticancer drugs. (2017)
  • Author(s): Udagawa C, Sasaki Y, Suemizu H, Ohnishi Y, Ohnishi H, Tokino T, Zembutsu H.
  • Organizer: American Association of Cancer Research(AACR, 米国癌学会)
  • Int'l Joint Research
• [Presentation] Targeted exome sequences of cancer-related genes in human cancers using amplicon sequencing. (2017)
  • Author(s): Sasaki Y, Nakagaki T, Tamura M, Fukushima H, Ikeda H, Koyama R, Idogawa M, Tokino T
  • Organizer: American Association of Cancer Research(AACR, 米国癌学会)
  • Int'l Joint Research
• [Presentation] Dynamically switching proteein interaction network during M-phase in vet￥rtebrate kinetochores (2017)
  • Author(s): Masatoshi Hara, Tatsuo Fukagawa
  • Organizer: ASCB Annual Meeting
  • Int'l Joint Research
• [Presentation] enChIP using CRISPR : a method for identification of molecules interacting with a locus of interest. (2017)
  • Author(s): Fujita, T. and Fujii, H.
  • Organizer: Cell Symposia, CRISPR : From Biology to Technology and Novel Therapeutics
  • Int'l Joint Research
• [Presentation] De novo metagenome assembly and methylome of the human gut microbiome using SMRT sequencing (2017)
  • Author(s): Yoshihiko Suzuki
  • Organizer: Cold Spring Harbor Laboraotry, Biology of Genomes
  • Int'l Joint Research
• [Presentation] Investigating non-canonical DNA modification in an animal model using single-molecule real-time sequencing (2017)
  • Author(s): Yusuke Takahashi
  • Organizer: Cold Spring Harbor Laboraotry, Biology of Genomes
  • Int'l Joint Research
• [Presentation] Genome-wide kinetic analysis of pre-mRNA processing in living animals (2017)
  • Author(s): Eichi Watabe, Hidehito Kuroyanagi
  • Organizer: CSHL Meetings/40 Years of mRNA Splicing : From Discovery to Therapeutics
  • Int'l Joint Research
• [Presentation] Kmt2b is required for spermatogenesis through both bivalent and monovalent priming of the spermatogonial stem cell epigenome. (2017)
  • Author(s): Tomizawa S, Kobayashi Y, Shirakawa T, Hoshi I, Nakajima K, Royo H, Peters AHFM, Anastassiadis K, Stewart AF, Ohbo K
  • Organizer: EMBO conference : Nuclear structure and dynamics
  • Int'l Joint Research
• [Presentation] enomic Consequences of the Indo-Pacific Vicariance in Coral Reef benthic organisms (2017)
  • Author(s): Nina Yasuda, Yukihiro Higashimura, Coralie Taquet, Satoshi Nagai, Handoko Adi Susanto, Miguel Fortes, Suharsono, Niphon Phongsuwan, Kazuo Nadaoka, Yoshihisa Suyama, Chika Mitsuyuki, Hideaki Yuasa, Catherine Vogler, GertWorhide,
  • Organizer: European Coral Reef Symposium
  • Int'l Joint Research
• [Presentation] Profiling cancer-related gene alterations in Japanese multiple myeloma patients by targeted amplicon sequencing. (2017)
  • Author(s): Fukushima H, Sasaki Y, Tamura M, Ikeda H, Ishiguro K, Tokino T.
  • Organizer: European Human Genetics Conference 2017
  • Int'l Joint Research
• [Presentation] Regulation of non-coding RNA contributes to the complete cessation of cell proliferation of neuron-like cells. (2017)
  • Author(s): Takuya IMAMURA
  • Organizer: France Japan Epigenetics Workshop 2017
  • Int'l Joint Research
• [Presentation] VITCOMIC2 : Visualization tool for the phylogenetic composition of microbial communities based on 16S rRNA gene amplicons and metagenomic shotgun sequencing (2017)
  • Author(s): Mori H, Maruyama T, Yano M, Yamada T, Kurokawa K.
  • Organizer: GIW 2017
  • Int'l Joint Research
• [Presentation] Post-transcriptional suppression of Dazl via its 3' UTR plays an important role in pre-implantation embryonic development. (2017)
  • Author(s): Kurumi Fufuda
  • Organizer: Gordon Research Conference
  • Int'l Joint Research
• [Presentation] Primordial follicle formation : insights from a study of an RNA-binding protein. (2017)
  • Author(s): Yuzuru Kato
  • Organizer: Gordon Research Conference
  • Int'l Joint Research
• [Presentation] Role of DDX6-mediated P-body formation in male germ cell development. (2017)
  • Author(s): Ryuki Shimada
  • Organizer: Gordon Research Conference
  • Int'l Joint Research
• [Presentation] Local structure changes of the influenza A virus ribonucleoprotein complex by a mutation in the specific residue involved in the efficient genome packaging (2017)
  • Author(s): Naoki Takizawa
  • Organizer: IUMS2017
  • Int'l Joint Research
• [Presentation] Onset symptoms and germline mutation variation in neurofibromatosis type2 (2017)
  • Author(s): 寺西裕, 宮脇哲, 岡野淳, 高柳俊作, 武笠晃丈, 中冨浩文, 斉藤延人
  • Organizer: NF Conference 2017
  • Int'l Joint Research
• [Presentation] Bacterial genome annotation web-platform DFAST : Toward faster genome publication (2017)
  • Author(s): Y Tanizawa, T Fujisawa, M Arita, Y Nakamura
  • Organizer: NIG International Symposium 2017 Commemorationg the 30th Anniversary of DDBJ. Life, Environment, and Evolution Revealed by Genomes
  • Int'l Joint Research
• [Presentation] VITCOMIC2 : visualization of the phylogenetic composition of microbial communities based on 16S rRNA gene amplicons and metagenomic shotgun sequencing (2017)
  • Author(s): Mori H, Maruyama T, Yano M, Yamada T, Kurokawa K.
  • Organizer: ProkaGenomics 2017
  • Int'l Joint Research
• [Presentation] Roles of Arc/arg3.1 on surface expression dynamics of AMPA receptors during structural plasticity and on cognitive refinement processes. (2017)
  • Author(s): Okuno H, Ishii Y, Endo T, Uehara M, Suzuki Y, Minatohara K, Araki A, Abe M, Imayoshi I, Kakeyama M, Sakimura K, Bito H.
  • Organizer: Society for Neuroscience
  • Int'l Joint Research
• [Presentation] Correlation between the critical day-length and the period of circadian clock in Japanese short-day duckweeds. (2017)
  • Author(s): Tomoaki Muranaka, Hiroshi Kudoh, Tokitaka Oyama
  • Organizer: Taiwan-Japan Plant Biology 2017
  • Int'l Joint Research
• [Presentation] Detection and analysis of spontaneous mutations in the C57BL/6JJcl strain by complete outbreeding. (2017)
  • Author(s): Fukumura R, Ishitsuka Y, Makino S, Nakai Y, Mori K, Toyoda A, Kuhara S, Fujiyama A, Gondo Y
  • Organizer: The 12th International Workshop on Advanced Genomics
  • Int'l Joint Research
• [Presentation] Illegitimate translation revealed by CRISPR-Cas9 genome editing : The genome-edited proteins rescue the knockout phenotype. (2017)
  • Author(s): Yoichi Gondo, Shigeru Makino, Kimiko Inoue, Michiko Hirose, Yuichi Ishitsuka, Ryutaro Fukumura, Atsuo Ogura
  • Organizer: The 12th International Workshop on Advanced Genomics
  • Int'l Joint Research
• [Presentation] Profiling cancer-related gene mutations in oral squamous cell carcinoma from Japanese patients by targeted amplicon sequencing (2017)
  • Author(s): Sasaki Y, Nakagaki T, Tamura M, Kobashi K, Koyama R, Fukushima F, Idogawa M, Ogi K, Hiratsuka H, Tokino T
  • Organizer: The 12th International Workshop on Advanced Genomics
  • Int'l Joint Research
• [Presentation] Capturing Alternative Secondary Structures of RNA by Decomposition of Base Pairing Probabilities (2017)
  • Author(s): Taichi Hagio, Shun Sakuraba, Junichi Iwakiri, Ryota Mori, Kiyoshi Asai
  • Organizer: The 28th International conference on Genome Informatics
  • Int'l Joint Research
• [Presentation] DFAST : a flexible prokaryotic genome annotation pipeline for faster genome publication (2017)
  • Author(s): Y Tanizawa, T Fujisawa, Y Nakamura
  • Organizer: The 28th International Conference on Genome Informatics
  • Int'l Joint Research
• [Presentation] U6 snRNA m6A stabilizes 5' splice site recognition (2017)
  • Author(s): Yuma Ishigami, Takayuki Ohira, Shin-ichiro Akichika, Takeo Suzuki, Yutaka Suzuki, Tsutomu Suzuki
  • Organizer: The 43rd Naito Conference- Noncoding RNA : Biology, Chemistry, & Diseases
  • Int'l Joint Research
• [Presentation] Pulmonary Regnase-1 functions as a posttranscriptional switch in anti-bacterial immunity. (2017)
  • Author(s): Nakatsuka, Y., Mino, T., Yoshinaga, M., Uehata, T., Sato, A., Handa, T., Chin, K., Hirai, T., Takeuchi, O.
  • Organizer: The 5th Annual Meeting of the International Cytokine and Interferon Society
  • Int'l Joint Research
• [Presentation] The amygdalar and hippocampal functions in zebrafish (2017)
  • Author(s): Koichi Kawakami
  • Organizer: The 5th European Zebrafish Meeting
  • Int'l Joint Research
• [Presentation] CpMinusl, mating-type minus genome specific gene of Closterium peracerosum-strigosum-littorale complex, promotes mt- phenotype (2017)
  • Author(s): Tsuyuki, N., Komiya, A., Kanda, N., Tsuchikane, Y., Nishiyama, T., Sekimoto, H.
  • Organizer: The 65th NIBB Conference Marchantia Workshop 2017
  • Int'l Joint Research
• [Presentation] MarpolBase : Genome Database for Marchantia polymorpha (2017)
  • Author(s): Y Tanizawa, T Mochizuki, Y Nakamura
  • Organizer: The 65th NIBB Conference : Renaissance of Marchantia polymorpha
  • Int'l Joint Research
• [Presentation] Novel AHDC1 mutations cause intellectual disability and developmental delay (2017)
  • Author(s): Tsurusaki Y, Enomoto Y, Ida K, Kurosawa K
  • Organizer: The American Society of Human Genetics Annual Meeting 2017
  • Int'l Joint Research
• [Presentation] Transcription factor IRF8 governs enhancer landscape dynamics during mononuclear phagocyte development (2017)
  • Author(s): Kurotaki D, Nakabayashi J, Nishiyama A, Sasaki H, Kaneko N, Kawase W, Ozato K, Suzuki Y, Tamura T
  • Organizer: The Annual Meeting of the American Association of Immunologists 2017
  • Int'l Joint Research
• [Presentation] Role of DDX6-mediated P-body formation in NANOS2 function (2017)
  • Author(s): Ryuki Shimada
  • Organizer: The International Research Symposium on Regulation of Germ cell Development in vivo and in vitro
  • Int'l Joint Research
• [Presentation] Biology of a picoeukaryotic phytoplankton, Parmales(Bolidophyceae), a sister group of diatoms (2017)
  • Author(s): 桑田 晃, 一宮睦雄, 吉川伸哉, 山田和正, 河地正伸, Mary-Hélène Noël, 斉藤 憲治, 中村 洋路, 沢田健, Adriana Lopes dos Santos, Daniel Vaulot
  • Organizer: The IVth International Conference "Molecular Life of Diatoms"
  • Int'l Joint Research
• [Presentation] Morphological and transcriptome analysis in cell wall formation of Triparma laevis (2017)
  • Author(s): 吉川伸哉, 佐藤晋也, 山崎誠司, 山田和正, 一宮睦雄, 斉藤 憲治, 中村 洋路, 佐藤直樹, 桑田 晃
  • Organizer: The IVth International Conference "Molecular Life of Diatoms"
  • Int'l Joint Research
• [Presentation] Examining genetic divergence of closely related Crown-of-Thorns starfish species between Indian and Pacific Ocean using whole genome data. (2017)
  • Author(s): Hideaki Yuasa, Rei Kajitani, Kazuki Takahashi, Dai Yoshimura, Takehiko Itoh, Yoshitoshi Ogura, Tetuya Hayashi, Zac Forsman, Nalinee Thongtham, Niphon Phongsuwan, Coralie Taquet, Marc Taquet, Nina Yasuda
  • Organizer: The Third Asia Marine Biology Symposium
  • Int'l Joint Research
• [Presentation] Evaluation of the utilization of blood collection tubes for cell-free DNA research (2017)
  • Author(s): Fumitaka Endo, Takeshi Iwaya, Takehiro Chiba, Mizunori Yaegashi, Kei Sato, Kohei Kume, Atsuhiro Arisue, Yutaka Nishinari, Ryoko Kawagishi, Takenori Segawa, Satoshi Nishizuka, Akira Sasaki.
  • Organizer: アメリカ癌学会
  • Int'l Joint Research
• [Presentation] Mutation detection by target sequence analyses using tissue-specific panels in esophageal squamous cell carcinoma (2017)
  • Author(s): Takeshi Iwaya, Fumitaka Endo, Kohei Kume, Yasushi Sasaki, Takashi Tokino, Satoshi Nishizuka
  • Organizer: アメリカ癌学会
  • Int'l Joint Research
• [Presentation] Loss of RNA degradation factors upon Salmonella infection stabilizes nuclear long non-coding RNAs (2017)
  • Author(s): 秋光信佳
  • Organizer: 内藤カンファレンス
  • Int'l Joint Research
• [Presentation] Discovery of a silicified scaly bolidophyte, the novel lineage matching with the hypothetical ancestor of diatoms (2017)
  • Author(s): 山田和正, 山崎誠司, 佐藤晋也, 吉川伸哉, 桑田 晃, 一宮睦雄
  • Organizer: 第11回国際藻類学会
  • Int'l Joint Research
• [Presentation] Human gut microbiome associated with colorectal cancer (2017)
  • Author(s): 山田 拓司
  • Organizer: 第76回日本癌学会学術総会(日本、横浜)
  • Int'l Joint Research
• [Presentation] Studies on skeletal muscle regeneration and atrophy? What zebrafish experienced in a space tour. (2017)
  • Author(s): Fuminori Sato, Choi Minyong, Zi Wang, Quan Wu, Ikumi Fujita, Misato Iwase, Satoko Uchida, Toru Sakimura, Yasushi Kono, Masaki Shirakawa, Fumiaki Tanigaki, Masahiro Chatani, Akira Kudo, Akihisa Takahashi, Junya Kobayashi, Kiyomi Imamura, Terumi Horiuchi, Satoshi Furukawa, Tadashi Muratani, Sumio Sugano, Yutaka Suzuki, Fumio Matsuzaki, Koichi Kawakami, and Atsuko Sehara-Fujisawa
  • Organizer: 第12回研究所ネットワーク国際シンポジウム
  • Int'l Joint Research
• [Presentation] Molecular mechanism and evolution of female-limited and polymorphic Batesain mimicry in Papilio polytes. (2017)
  • Author(s): Fujiwara, H., Nishikawa, H., Iijima, T., Kajitani, R. and Ito, T.
  • Organizer: 19th Annual Meeting of the Society of Evolutionary Studiies
  • Invited
• [Presentation] がん関連線維芽細胞による乳がん幹細胞維持機構の解析 (2017)
  • Author(s): 後藤典子
  • Organizer: 2017生命科学系学会合同年次総会(ConBio2017)
  • Invited
• [Presentation] 個体レベルで行う mRNA前駆体プロセシングの動態の解析 (2017)
  • Author(s): 渡部 栄地、黒柳 秀人
  • Organizer: 2017年度生命科学系学会合同年次大会
  • Invited
• [Presentation] トンボの紫外線反射の分子機構 (2017)
  • Author(s): 二橋亮
  • Organizer: 2017年度生命科学系学会合同年次大会ConBio2017
  • Invited
• [Presentation] コンポストから分離された次世代放線菌「クテドノバクテリア」の魅力 (2017)
  • Author(s): 矢部修平
  • Organizer: 2017年度日本生物工学会北日本支部 札幌シンポジウム
  • Invited
• [Presentation] クロマチン制御による神経幹細胞の運命制御機構 (2017)
  • Author(s): 岸雄介、後藤由季子
  • Organizer: Active Motif Tokyo Chromatin Club 2nd Meeting
  • Invited
• [Presentation] Adult neural stem cells and their embryonic origin (2017)
  • Author(s): 後藤由季子
  • Organizer: Cell Press Lablinks, Stem Cells in Disease Modeling and Therapeutics
  • Invited
• [Presentation] 長鎖ncRNAによるほ乳類エピゲノム制御 (2017)
  • Author(s): 今村拓也
  • Organizer: ConBio2017
  • Invited
• [Presentation] Polycomb複合体による神経幹細胞の運命制御機構 (2017)
  • Author(s): 岸雄介、壼井將史、平林祐介、衛藤光、桑山尚大、古関明彦、後藤由季子
  • Organizer: ConBio2017
  • Invited
• [Presentation] Regulation of neural stem/progenitor cell fate (2017)
  • Author(s): 後藤由季子
  • Organizer: ConBio2017
  • Invited
• [Presentation] セントロメア形成に関与する遺伝学・エピ遺伝学 (2017)
  • Author(s): 深川竜郎
  • Organizer: ConBIO2017
  • Invited
• [Presentation] 神経発生をin vivoで理解するための技術開発-非造血系組織の生体内における発生理解に向けて- (2017)
  • Author(s): 岸雄介
  • Organizer: ConBio2017
  • Invited
• [Presentation] ショウジョウバエにおけるNeo性染色体の進化 : 性染色体は有害か? (2017)
  • Author(s): 野澤昌文
  • Organizer: ConBio2017ワークショップ・多細胞動物における性決定システムの多様性と進化
  • Invited
• [Presentation] 長鎖ノンコーディングRNAから学ぶ人工RNAデザイン (2017)
  • Author(s): 秋光信佳
  • Organizer: ConBio2018
  • Invited
• [Presentation] IPAを活用した血球細胞分化を制御する転写因子の研究 (2017)
  • Author(s): 黒滝 大翼
  • Organizer: Ingenuityユーザーミーティング
  • Invited
• [Presentation] NGSによるHLA/KIRタイピングの現状と展望 (2017)
  • Author(s): 細道一善
  • Organizer: 第1回関東HLA研究会
  • Invited
• [Presentation] 内生糸状菌とシロイヌナズナのリン栄養依存的な共棲関係の理解及びその効果の強化に向けて (2017)
  • Author(s): 畫間敬、西條雄介
  • Organizer: 環境微生物系学会合同大会2017
  • Invited
• [Presentation] 制約と方向性をどのように理解するかー理論的背景 (2017)
  • Author(s): 古澤力
  • Organizer: シンポジウム「進化の制約と方向性」
  • Invited
• [Presentation] 多様な選択圧下での大腸菌進化実験による揺らぎー応答関係の定量解析 (2017)
  • Author(s): 古澤力
  • Organizer: シンポジウム「進化の制約と方向性」
  • Invited
• [Presentation] ヒト腸内細菌と大腸がん発病モデル (2017)
  • Author(s): 山田 拓司
  • Organizer: 日本マイクロバイオームコンソーシアム(JMBC)設立記念シンポジウム
  • Invited
• [Presentation] ストレス抵抗における長鎖ノンコーディングRNAの機能に関する研究 (2017)
  • Author(s): 秋光信佳
  • Organizer: 放射線若手の会
  • Invited
• [Presentation] ショウジョウバエゲノムと遺伝学で性染色体の進化をどこまで理解できるか? (2017)
  • Author(s): 野澤昌文
  • Organizer: 遺伝研研究集会・進化遺伝学における実験的研究と理論的研究の融合
  • Invited
• [Presentation] 筋維持・萎縮機構の研究 : 宇宙から学ぶこと (2017)
  • Author(s): 瀬原淳子
  • Organizer: 宇宙科学談話会
  • Invited
• [Presentation] アゲハの多様な擬態 : 色と紋様の形成メカニズム (2017)
  • Author(s): 藤原晴彦
  • Organizer: 宇都宮大学オプトバイオシンポジウム
  • Invited
• [Presentation] データベース・カルチャーコレクションでひもとく微生物の進化 (2017)
  • Author(s): 岩崎渉
  • Organizer: 環境微生物系学会合同大会2017
  • Invited
• [Presentation] 人為的進化系を利用した細菌の病原性システムの理解 (2017)
  • Author(s): 垣内 力
  • Organizer: 生命科学系学会合同年次大会ConBio2017 シンポジウム
  • Invited
• [Presentation] RNA修飾によるエピトランスクリプトーム制御と疾患 (2017)
  • Author(s): 鈴木 勉
  • Organizer: 千里ライフサイエンスセミナー : 生命を司り、操る～ノンコーディングRNAの底知れぬ力
  • Invited
• [Presentation] 神経幹細胞の運命制御 (2017)
  • Author(s): 後藤由季子
  • Organizer: 大阪大学微生物研究所・部員会共催ブリッジセミナー
  • Invited
• [Presentation] 実験室内進化モデルを利用して、哺乳類の進化の過程を理解する (2017)
  • Author(s): 内村有邦
  • Organizer: 第10回Evo-Devo青年の会
  • Invited
• [Presentation] 大腸菌の人工進化実験における表現型・遺伝子型の網羅的解析 (2017)
  • Author(s): 古澤力
  • Organizer: 第16回 微生物研究会-微生物の多様な生き様にせまる
  • Invited
• [Presentation] 卵巣明細胞癌における新規治療標的融合遺伝子の網羅的探索 (2017)
  • Author(s): 吉原弘祐、田村亮、森裕太郎、山脇芳、須田一暁、石黒竜也、榎本隆之
  • Organizer: 第16回日本婦人科がん分子標的研究会
  • Invited
• [Presentation] IRF転写因子による単核貪食細胞の分化・応答制御と疾患 (2017)
  • Author(s): 田村 智彦
  • Organizer: 第1回 東京理科大-横浜市大合同シンポジウム
  • Invited
• [Presentation] サンゴ礁無無脊椎動物の初期生態と集団進化に関する研究 (2017)
  • Author(s): 安田仁奈
  • Organizer: 第20回日本サンゴ礁学会
  • Invited
• [Presentation] 北方針葉樹の標髙に沿った適応 : 遺伝的基盤の解明に向けて (2017)
  • Author(s): 後藤 晋
  • Organizer: 第28回Qecoセミナー
  • Invited
• [Presentation] 超髙速ゲノムリシーケンシングによる変異検出の現状と問題点 (2017)
  • Author(s): 権藤洋一
  • Organizer: 第31回東海大学医学部基礎医学系懇談会
  • Invited
• [Presentation] Cancer stem-like cells derived from breast cancer or lung cancer (2017)
  • Author(s): 後藤典子
  • Organizer: 第33回日本毒性病理学会総会
  • Invited
• [Presentation] マウスとイモリを用いた再生の研究～再生能の違いは何が決めるのか? (2017)
  • Author(s): 竹内隆
  • Organizer: 第3回幹細胞研究会
  • Invited
• [Presentation] Regulation of neural stem cell fate during development and in the adult, (2017)
  • Author(s): 後藤由季子
  • Organizer: 第40回日本神経科学大会
  • Invited
• [Presentation] Nuclear mutant p53 induces colon cancer progression through induction of aberrant and invasive tumor glands (2017)
  • Author(s): Oshima M
  • Organizer: 第40回日本分子生物学会・第90回日本生化学会(ConBio2017)
  • Invited
• [Presentation] ニューロンにおけるエピゲノム制御とその破綻 (2017)
  • Author(s): 今村拓也
  • Organizer: 第44回日本毒性学会学術大会
  • Invited
• [Presentation] 共生微生物の代謝系がもたらす昆虫の環境適応 (2017)
  • Author(s): 深津武馬
  • Organizer: 第44回日本毒性学会学術年会シンポジウム「ケミカルエコロジーと毒性学」
  • Invited
• [Presentation] IRF transcription factors in the development and function of mononuclear phagocytes (2017)
  • Author(s): Tamura T
  • Organizer: 第46回 日本免疫学会学術集会
  • Invited
• [Presentation] C. elegansにおいて静止期前駆細胞の活性化を制御する食餌中の栄養分子と遺伝子の解明 (2017)
  • Author(s): 福山征光
  • Organizer: 第50回日本発生生物学会 シンポジウム
  • Invited
• [Presentation] 脳を作る神経幹細胞の運命制御 (2017)
  • Author(s): 後藤由季子
  • Organizer: 第54回日本臨床分子医学会学術集会
  • Invited
• [Presentation] 大規模実験室進化とオミックス解析による大腸菌のストレス耐性機構の解析 (2017)
  • Author(s): 堀之内貴明, 前田智也, 古澤力
  • Organizer: 第69回生物工学会大会シンポジウム
  • Invited
• [Presentation] 核内長鎖ノンコーディングRNAの分解制御を通じた病原体抵抗機構 (2017)
  • Author(s): 秋光信佳
  • Organizer: 第69回日本細胞生物学会大会
  • Invited
• [Presentation] クロマチン制御による神経幹細胞の運命制御機構 (2017)
  • Author(s): 岸雄介、平林祐介、衛藤光、桑山尚大、鈴木穣、古関明彦、後藤由季子
  • Organizer: 第69回日本細胞生物学会大会
  • Invited
• [Presentation] 筋維持・萎縮機構の研究 : 宇宙から学ぶこと (2017)
  • Author(s): 瀬原淳子
  • Organizer: 第6回実験動物科学シンポジウム
  • Invited
• [Presentation] Combination of driver mutations for malignant invasion and metastasis (2017)
  • Author(s): Oshima M
  • Organizer: 第76回日本癌学会学術総会
  • Invited
• [Presentation] ゲノム解析技術の革新と医学・医療へのインパクト～次世代シーケンサーによるHLA遺伝子解析と可能性～ (2017)
  • Author(s): 細道一善
  • Organizer: 第8回あきた免疫・移植・感染症研究会
  • Invited
• [Presentation] IL6-STAT3経路の活性化が子宮腺筋症の進展に寄与する (2017)
  • Author(s): 廣田泰, 平岡毅大, 大須賀穣
  • Organizer: 第90回日本内分泌学会学術総会
  • Invited
• [Presentation] 増殖因子によるがん幹細胞とそのニッチ制御の分子機構 (2017)
  • Author(s): 後藤典子
  • Organizer: 第9回シグナルネットワーク研究会
  • Invited
• [Presentation] 宇宙科学から探る筋萎縮機構 (2017)
  • Author(s): 瀬原淳子
  • Organizer: 第9回分子骨格筋代謝研究会
  • Invited
• [Presentation] 大腸菌実験室進化とオミックス解析を用いて大腸菌の適応進化過程を解析する (2017)
  • Author(s): 堀之内貴明, 前田智也, 古澤力
  • Organizer: 第五回NGS現場の会
  • Invited
• [Presentation] 転写因子IRF8による単核貪食細胞の分化制御そしてCMLとの関わり (2017)
  • Author(s): 田村 智彦
  • Organizer: 東京血液懇話会
  • Invited
• [Presentation] 脳をつくる神経幹細胞の運命制御 (2017)
  • Author(s): 後藤由季子
  • Organizer: 東京大学生命科学シンポジウム
  • Invited
• [Presentation] 共生・進化・多様性 (2017)
  • Author(s): 深津武馬
  • Organizer: 日本学術会議シンポジウム「進化学と自然史博物館」
  • Invited
• [Presentation] 非モデル昆虫のエボデボ研究 (2017)
  • Author(s): 新美輝幸
  • Organizer: 日本進化学会第19回大会シンポジウム“エボデボから見る非モデル生物研究の魅力”
  • Invited
• [Presentation] ハマウツボ科寄生植物の寄生器官の発生と形づくり (2017)
  • Author(s): 吉田聡子
  • Organizer: 日本農芸化学会第177回中部支部会シンポジウム
  • Invited
• [Presentation] 植物に寄生する植物 : 寄生植物の宿主の見つけ方 (2017)
  • Author(s): 吉田聡子
  • Organizer: 日本分子生物学会
  • Invited
• [Presentation] 分子遺伝学的視点から見た蝶の斑紋パターンの形成メカニズム-絵画を描くように- (2017)
  • Author(s): 藤原晴彦
  • Organizer: 明治大学MIMS共同研究集会 : 自然に現れる紋様、形態の統合的理解
  • Invited
• [Presentation] Regulation of embryonic and adult neural stem cell fate (2017)
  • Author(s): 後藤由季子
  • Organizer: 理研エピジェネティクスセミナー
  • Invited
• [Presentation] 神経幹細胞の運命制御 (2017)
  • Author(s): 後藤由季子
  • Organizer: 立命館大学システム視覚科学シンポジウム
  • Invited
• [Presentation] Identification of a novel HIV-1 restriction factor which selectively degrades viral transcripts. (2017)
  • Author(s): Yamasoba, D., Sato, K., Uehata, T., Mino, T., Koyanagi, Y., Takeuchi, O
  • Organizer: 2017 Annual Meeting of Japanese Society for Immunology.
• [Presentation] Interactions between Regnase-1 and Roquin Regulate Helper T Cell Polarization. (2017)
  • Author(s): Cui, X., Mino, T., Yoshinaga, M., Uehata, T., Nakatsuka, Y., Takeuchi, O.
  • Organizer: 2017 Annual Meeting of Japanese Society for Immunology.
• [Presentation] Regnase-1 regulates inflammation-related mRNAs during pioneer rounds of translation. (2017)
  • Author(s): Mino, T., Takeuchi, O.
  • Organizer: 2017 Annual Meeting of Japanese Society for Immunology.
• [Presentation] 新規培養株の確立により示されたパルマ藻の系統的多様性 (2017)
  • Author(s): 山田和正, 山﨑誠司, 佐藤晋也, 吉川伸哉, 桑田 晃, 一宮睦雄
  • Organizer: 2017年 日本プランクトン学会・日本ベントス学会合同大会
• [Presentation] 血球系前駆細胞における早期系譜決定のエピジェネティック制御 (2017)
  • Author(s): 黒滝 大翼
  • Organizer: 2017年度 生命科学系学会合同年次大会
• [Presentation] CRISPRを利用したin vitro enChIP法の開発およびゲノム領域間相互作用の検出への応用 (2017)
  • Author(s): 藤田敏次、藤井穂高
  • Organizer: 2017年度 生命科学系学会合同年次大会
• [Presentation] Identification of potential regulatory mutations using multi-omics analysis and haplotyping of lung adenocarcinoma cell lines (2017)
  • Author(s): Sarun Sereewattanawoot, Ayako Suzuki, Masahide Seki, Takashi Kohno, Sumio Sugano, Katsuya Tsuchihara & Yutaka Suzuki
  • Organizer: 2017年度 生命科学系学会合同年次大会(ConBio2017)
• [Presentation] 神経活動依存的に発現する遺伝子Hr38はCREBの下流で長期記憶の形成を促進する (2017)
  • Author(s): 坂本 沙紀, 箕口 昌杜, 大村 知世, 岩見 雅史, 木矢 剛智
  • Organizer: ConBio2017
• [Presentation] Regnase-1 maintains iron homeostasis via the destabilization of iron-regulatory transcripts. (2017)
  • Author(s): Yoshinaga, M., Mino, T., Takeuchi, O.
  • Organizer: Consortium of Biological Sciences (ConBio) 2017.
• [Presentation] 微生物群集の系統組成推定・描画ツールVITCOMIC2の開発と応用 (2017)
  • Author(s): 森宙史
  • Organizer: NGS現場の会第五回研究会
• [Presentation] NGS情報解析のための公開プラットフォーム提案 (2017)
  • Author(s): 権藤洋一、福村龍太郎、中井祐治
  • Organizer: NGS現場の会第5回研究会
• [Presentation] WGSを用いた近交系マウスC57BL/JJclに生じる自然発生突然変異/SNV検出と公開 (2017)
  • Author(s): 福村龍太郎、小瀧逸人、石塚祐一、牧野茂、中井祐治、森一樹、久原哲、豊田敦、藤山秋佐夫、権藤洋一
  • Organizer: NGS現場の会第5回研究会
• [Presentation] WGSを用いた日本産野生マウス由来近交系MSM/Msにおける自然突然変異の検出 (2017)
  • Author(s): 中井祐治、福村龍太郎、金相完、森一樹、門田雅代、目加田和之、田代康介、久原哲、吉木淳、豊田敦、藤山秋佐夫、権藤洋一
  • Organizer: NGS現場の会第5回研究会
• [Presentation] NGSを使用した古人骨ゲノム解析-浜中2遺跡出土オホーツク文化人骨の研究事例- (2017)
  • Author(s): 佐藤丈寛、安達登、木村亮介、米田穣、太田博樹、田嶋敦、豊田敦、松前ひろみ、小金渕佳江、清水健太郎、埴原恒彦、ウェーバー・アンジェイ、加藤博文、石田肇
  • Organizer: NGS現場の会第5回研究会
• [Presentation] ライブラリ調製キットNextera XTによるシーケンスバイアスと細菌のGC含量の関係 (2017)
  • Author(s): 佐藤光彦, 小椋義俊, 中村佳司, 西田留梨子, 後藤恭宏, 久恒順三, 菅井基行, 伊藤武彦, 林哲也
  • Organizer: NGS現場の会第5回研究会
• [Presentation] SonicParanoid : 超高速・簡単・正確なオルソログ同定 (2017)
  • Author(s): Salvatore Cosentino and Wataru Iwasaki
  • Organizer: NGS現場の会第五回研究会
• [Presentation] 内因性抗原提示におけるRegnase-1の役割 (2017)
  • Author(s): 岩井紀貴, 三野享史, 竹内理
  • Organizer: RNAフロンティアミーティング2017
• [Presentation] Exploring the RNA regulational landscape via codon optimality. (2017)
  • Author(s): Hia, F., Takeuchi, O.
  • Organizer: The 19th RNA meeting of the RNA Society of Japan.
• [Presentation] SMG1 regulates inflammatory mRNAs through Regnase-1-mediated mRNA decay. (2017)
  • Author(s): Mino, T., Iwai, N., Akaki, K., Yamashita, A., Takeuchi, O.
  • Organizer: The 19th RNA meeting of the RNA Society of Japan.
• [Presentation] Identification of an interferon inducible RNA binding protein as a restriction factor of HIV-1. (2017)
  • Author(s): Yamasoba, D., Sato, K., Uehata, T., Mino, T., Koyanagi, Y., Takeuchi, O.
  • Organizer: The 65th Annual Meeting of the Japanese Society for Virology
• [Presentation] 日本産短日性ウキクサにみられる概日リズム周期と花成限界日長の負の相関 (2017)
  • Author(s): Tomoaki Muranaka, Tokitaka Oyama
  • Organizer: 時間生物学会
• [Presentation] 日本産短日性アオウキクサにおける花成限界日長と概日リズム周期の相関 (2017)
  • Author(s): 村中智明、工藤洋、小山時隆
  • Organizer: 種生物学会
• [Presentation] フレームシフト変異マウスを利用した翻訳開始点の解析 (2017)
  • Author(s): 牧野茂、井上貴美子、廣瀬美智子、石塚祐一、福村龍太郎、小倉淳郎、権藤洋一
  • Organizer: 第30回モロシヌス研究会
• [Presentation] 食道扁平上皮癌パネルを用いた変異解析の有用性の検討 (2017)
  • Author(s): 岩谷 岳、遠藤 史隆、西塚 哲、秋山 有史、高原 武志、大塚 幸喜、新田 浩幸、肥田 圭介、水野 大、佐々木 章
  • Organizer: 第72回消化器外科学会総会
• [Presentation] Exploitation of a liquid biopsy system using circulating tumor DNA in esophageal cancer patients (2017)
  • Author(s): Takeshi Iwaya, Fumitaka Endo, Yasushi Sasaki, Mizunori Yaegashi, Takehiro Chiba, Yuji Akiyama, Mari Masuda, Tesshi Yamada, Takashi Tokino, Satoshi Nishizuka
  • Organizer: 第76回日本癌学会学術総会
• [Presentation] 家族性大腸腺腫症オルガノイドを用いた発がん機構解明 (2017)
  • Author(s): 八尾 良司、小柳 潤、長山 聡、野田 哲生
  • Organizer: 第76回日本癌学会学術総会
• [Presentation] 同一症例からの原発巣および転移巣由来のオルガノイドを利用した機能解析 (2017)
  • Author(s): 長山 聡、八尾 良司
  • Organizer: 第76回日本癌学会学術総会
• [Presentation] 神経線維腫症2型の遺伝的背景解明に向けた変異遺伝子解析および臨床解析 (2017)
  • Author(s): 寺西裕, 宮脇哲, 岡野淳, 高柳俊作, 武笠晃丈, 中冨浩文, 斉藤延人
  • Organizer: 日本人類遺伝学会 第62回大会
• [Presentation] 神経線維腫症2型の遺伝的背景解明に向けた取り組み(変異遺伝子解析および臨床関連解析) (2017)
  • Author(s): 寺西裕, 宮脇哲, 岡野淳, 高柳俊作, 武笠晃丈, 中冨浩文, 斉藤延人
  • Organizer: 日本脳神経外科学会 第76回学術総会
• [Presentation] ニガウリ雌性花着花率に関するQTL解析の試み (2017)
  • Author(s): 三宅真佑子、鈴木翔太、福島舞、谷合直樹、宮城徳道、太郎良和彦、浦崎直也、松村英生
  • Organizer: 日本育種学会
• [Presentation] ほとんどの自然発生突然変異は弱有害である (2017)
  • Author(s): 権藤洋一
  • Organizer: 日本遺伝学会第89回大会
• [Presentation] マウスGli3ゲノム編集変異は定型外翻訳によって致死表現型をレスキューする (2017)
  • Author(s): 牧野茂、井上貴美子、田村勝、廣瀬美智子、石塚祐一、福村龍太郎、若菜茂晴、小倉淳郎、権藤洋一
  • Organizer: 日本遺伝学会第89回大会
• [Presentation] 日本産野生マウス由来近交系MSM/Msにおける自然発生突然変異の検出 (2017)
  • Author(s): 福村龍太郎、中井祐治、金相完、森一樹、門田雅世、目加田和之、田代康介、久原哲、吉木淳、豊田敦、藤山秋佐夫、内村有邦、権藤洋一
  • Organizer: 日本遺伝学会第89回大会
• [Presentation] Dissecting the network of viral RNAs in influenza A virus virion (2017)
  • Author(s): 滝沢 直己
  • Organizer: 第65回日本ウイルス学会年会
• [Presentation] イトマキヒトデの卵成熟前後におけるmRNA3'末端の網羅的解析 (2017)
  • Author(s): 野川 駿, 岩永 紗弥, 梶谷 嶺, 越智 洋絵, 鈴木 穣, 千葉 和義, 伊藤 武彦
  • Organizer: 日本動物学会第88回富山大会
• [Presentation] ショートリードを用いたりピート配列のde novo検出法の開発 (2017)
  • Author(s): 田中 良樹, 梶谷 嶺, 豊田 敦, 後藤 友二, 久保田 宗一郎, 伊藤 武彦
  • Organizer: 日本動物学会第88回富山大会
• [Presentation] トンボの色覚・体色の多様性と環境適応 (2017)
  • Author(s): 二橋亮
  • Organizer: 日本動物学会
• [Presentation] Post-transcriptional suppression of Dazl via its 3' UTR plays an important role in pre-implantation embryonic development. (2017)
  • Author(s): Kurumi Fufuda
  • Organizer: 日本発生生物学会
• [Presentation] Requirement of DDX6-mediated P-body formation in male germ cell development (2017)
  • Author(s): Ryuki Shimada
  • Organizer: 日本発生生物学会
• [Presentation] マウス生殖細胞分化に必須なRNA結合タンパク質の機能を司る構造基盤の解析 (2017)
  • Author(s): Danelle Wright
  • Organizer: 日本分子生物学会
• [Presentation] 生殖細胞特異的NANOS2-DND1経路の体細胞における再構成 (2017)
  • Author(s): Takamasa Hirano
  • Organizer: 日本分子生物学会
• [Presentation] 日本産野生マウス由来近交系MSM/Msにおける自然突然変異の検出 (2017)
  • Author(s): 福村龍太郎, 中井祐治, 金相完, 森一樹, 門田雅世, 目加田和之, 田代康介, 久原哲, 吉木淳, 豊田敦, 藤山秋佐夫, 権藤洋
  • Organizer: 遺伝学会
• [Presentation] MeDIP-seqによるハクサイ系統間のDNAメチル化比較解析 (2017)
  • Author(s): 藤本 龍 ; 高橋 聡史 ; 鈴木 穣 ; 関 原明 ; 安田 剛志
  • Organizer: 園芸学会平成29年度秋期大会
• [Presentation] Developmental stage-dependent change of SMAD target genes defines the neural stem cell lineage (2017)
  • Author(s): SAYAKO KATADA
  • Organizer: 釜山-九大合同シンポジウム
• [Presentation] ゲノムから推定する遅増殖性Nitrotogaの活性促進因子 (2017)
  • Author(s): 石井 挙人, 藤谷 拓嗣, 常田 聡
  • Organizer: 環境微生物系学会合同大会2017
• [Presentation] Phenotypic Constraints Shaped by Evolution : Numerical and Experimental Approaches (2017)
  • Author(s): Chikara Furusawa, Kunihiko Kaneko, Takaaki Horinouchi, Tomoya Maeda
  • Organizer: 生物物理学会 第55回年会
• [Presentation] Regnase-1 は鉄代謝関連のmRNAを分解することで鉄恒常性を維持する (2017)
  • Author(s): 吉永正憲, 三野享史, 竹内理
  • Organizer: 第19回 日本 RNA 学会年会
• [Presentation] On the evolutionary origin of insect wings : comparison of development between basal pterygote and apterygote insects. (2017)
  • Author(s): Ohde, T. and Niimi T.
  • Organizer: 第10回Evo-Devo青年の会
• [Presentation] クロマチン制御による神経幹細胞の運命制御機構 (2017)
  • Author(s): 岸雄介、平林祐介、衛藤光、桑山尚大、鈴木穣、古関明彦、後藤由季子
  • Organizer: 第11回日本エピジェネティクス研究会年会
• [Presentation] 大量データに対応した微生物群集の系統組成推定・描画ツールVITCOMIC2 (2017)
  • Author(s): 森宙史, 丸山貴之, 矢野雅大, 黒川顕
  • Organizer: 第11回日本ゲノム微生物学会年会
• [Presentation] 全自動培養システムを用いた多種ストレス環境化における大腸菌進化ダイナミクスの解析 (2017)
  • Author(s): 前田智也, 堀之内貴明, 阪田奈津江, 小谷葉月, 酒井亜季, 田邊久美, 古澤力
  • Organizer: 第16回微生物研究会
• [Presentation] 大腸がん発病に伴うヒト腸内細菌のマルチオミクス解析 (2017)
  • Author(s): 山田 拓司
  • Organizer: 第17回日本抗加齢医学会総会(日本、東京)
• [Presentation] 個体レベルで行うmRNA前駆体プロセシングの動態の解析 (2017)
  • Author(s): 渡部 栄地、黒柳 秀人
  • Organizer: 第19回日本RNA学会年会
• [Presentation] IncRNA-mRNAの網羅的相互作用予測へ向けた高速なRNA-RNA相互作用予測ソフトウェアRIblastの開発 (2017)
  • Author(s): 福永 津嵩、岩切 淳一、小野 幸輝、浜田 道昭
  • Organizer: 第19回日本RNA学会年会
• [Presentation] IncRNAの組織特異的な発現に関与するTransposable Elementの同定 (2017)
  • Author(s): 千島 崇史, 岩切 淳一, 浜田 道昭
  • Organizer: 第19回日本RNA学会年会
• [Presentation] ヒトIncRNA-RNAの網羅的相互作用予測及びデータベースの構築 (2017)
  • Author(s): 福永 津嵩, 岩切 淳一, 小野 幸輝, 浜田 道昭
  • Organizer: 第19回日本RNA学会年会
• [Presentation] 単核貪食細胞系におけるIRF8の発現に重要な新規遠位エンハンサーの同定 (2017)
  • Author(s): Sasaki H, Nishiyama A, Kurotaki D, Tamura T
  • Organizer: 第1回 東京理科大-横浜市大合同シンポジウム
• [Presentation] 転写因子IRF8は造血早期において樹状細胞系譜への分化をエピジェネティックに制御する (2017)
  • Author(s): 川瀬 航, 黒滝 大翼, 中林 潤, 西山 晃, Herbert C. Morse III, Keiko Ozato, 鈴木 穣, 田村 智彦
  • Organizer: 第1回 東京理科大-横浜市大合同シンポジウム
• [Presentation] 最も早期の樹状細胞前駆細胞の同定 (2017)
  • Author(s): 川瀬 航, 黒滝 大翼, 中林 潤, Herbert C. Morse III, Keiko Ozato, 鈴木 穣, 田村 智彦
  • Organizer: 第28回 日本生体防御学会学術総会
• [Presentation] Apoptotic signaling regulates temperature tolerance in nervous system (2017)
  • Author(s): Tomoyo Ujisawa, Akane Ohta, Tatsuya Li, Yohei Minakuchi, Katsushi Arisaka, Atsushi Toyoda, Miki Ii, Atsushi Kuhara
  • Organizer: 第40回 日本神経科学大会
• [Presentation] Tfap2c-Bmp7遺伝子座で互いに反目方向に並ぶ2つのCTCF結合クラスターは、クロマチンの隣接コンタクトドメインを分断し、かつ内部コンタクトパターンに関与する (2017)
  • Author(s): 辻村太郎、高瀬敦、吉川真弘、佐野悦子、高戸毅、豊田敦、岡野栄之、菱川慶一
  • Organizer: 第40回日本分子生物学会年会(ConBio2017)
• [Presentation] 自己免疫応答におけるRNAサイレンシング活性の調節機構とそれに伴う遺伝子発現変動 (2017)
  • Author(s): 中野悠子、高橋朋子、尾野本浩司、米山光俊、程久美子
  • Organizer: 第40回日本分子生物学会年会/ConBio2017
• [Presentation] 大腸がん発病に伴うヒト腸内細菌のマルチオミクス解析 (2017)
  • Author(s): 山田 拓司
  • Organizer: 第42回 日本医用マススペクトル学会(日本、東京)
• [Presentation] 変異蓄積マウス系統を用いた生殖系列変異の解析 (2017)
  • Author(s): 内村有邦、樋口真弓、水口洋平、豊田敦、西野穣、八木健
  • Organizer: 第42回中国地区放射線影響研究会
• [Presentation] A novel distal enhancer responsible for Irf8 expression in the mononuclear phagocyte lineage (2017)
  • Author(s): Sasaki H, Nishiyama A, Kurotaki D, Tamura T
  • Organizer: 第46回 日本免疫学会学術集会
• [Presentation] LGP2 upregulates apoptosis-related genes functions by acting as an RNA silencing modulator during viral infection. (2017)
  • Author(s): Tomoko Takahashi, Yuko Nakano, Koji Onomoto, Chiaki Komori, Mitsutoshi Yoneyama, Kumiko Ui-Tei
  • Organizer: 第46回日本免疫学会学術集会
• [Presentation] マダラシミの胚発生期における幼若ホルモン関連遺伝子群の発現解析 (2017)
  • Author(s): 峯村俊儀・大出高弘・新美輝幸・塩月孝博・大門髙明
  • Organizer: 第62回日本応用動物昆虫学会大会
• [Presentation] ヒト腸内細菌データベースとその利用 (2017)
  • Author(s): 山田 拓司
  • Organizer: 第69回 日本生物工学会大会(日本、東京)
• [Presentation] STAT3 is crucial for the entire process of uterine regeneration in a mouse model of decellularized matrix transplantation. (2017)
  • Author(s): Hiraoka T, Hirota Y, Fujita T, Akaeda S, Tanaka T, Matsuo M, Matsumoto L, Haraguchi H, Osuga Y, Fujii T.
  • Organizer: 第69回日本産科婦人科学会学術講演会
• [Presentation] Uterine extracellular matrix is a useful material for normai uterine regeneration in a mouse model od decellularized matrix (2017)
  • Author(s): Takehisa C, Hirota Y, Hiraoka T, Fujita T, Haraguchi H, Matsumoto L, Matsuo M, Akaeda S, Tanaka T, Osuga Y, Fujii T.
  • Organizer: 第69回日本産科婦人科学会学術講演会
• [Presentation] Estimation of mapping parameters for PAR-CLIP data using LAST-TRAIN (2017)
  • Author(s): Mei Takeda, Junichi Iwakiri, Michiaki Hamada
  • Organizer: 第6回生命医薬情報学連合大会(IIBMP)
• [Presentation] Identification of Transposable Elements which contribute to tissue specific expression of lncRNAs (2017)
  • Author(s): Takafumi Chishima, Junichi Iwakiri, Michiaki Hamada
  • Organizer: 第6回生命医薬情報学連合大会(IIBMP)
• [Presentation] Cancer genome phasing for regulatory mutations and allelic transcriptional imbalances using long read sequencing (2017)
  • Author(s): Ayako Suzuki, Sarun Sereewattanawoot, Yutaka Suzuki & Katsuya Tsuchihara
  • Organizer: 第76回 日本癌学会学術総会
• [Presentation] Identification of novel therapeutically targetable fusion transcripts in ovarian clear cell carcinoma (2017)
  • Author(s): Kosuke Yoshihara, Yutaro Mori, Kaoru Yamawaki, Tatsuya Ishiguro, Takayuki Enomoto
  • Organizer: 第76回日本癌学会学術総会
• [Presentation] 口腔扁平上皮癌の全エクソン解析 (2017)
  • Author(s): 佐々木泰史, 田村みゆき, 中垣貴文, 小山良太, 井戸川雅史, 荻和弘, 平塚博義, 仲瀬裕志, 時野隆至
  • Organizer: 第76回日本癌学会学術総会
• [Presentation] 神経活動依存的に発現する遺伝子Hr38 はCREBの下流で長期記憶の形成を促進する (2017)
  • Author(s): 坂本 沙紀, 箕口 昌杜, 大村 知世, 岩見 雅史, 木矢 剛智
  • Organizer: 第88回日本動物学会
• [Presentation] 脱細胞化組織移植技術を用いたマウス子宮再生における転写因子STAT3の役割 (2017)
  • Author(s): 平岡毅大, 廣田泰, 藤田知子, 田中智基, 赤枝俊, 松尾光徳, 松本玲央奈, 原口広史, 大須賀穣, 藤井知行
  • Organizer: 第90回日本内分泌学会学術総会
• [Presentation] フレームシフト変異アレルからの定型外翻訳によるタンパク質発現 (2017)
  • Author(s): 牧野茂、井上貴美子、廣瀬美智子、石塚祐一、福村龍太郎、小倉淳郎、権藤洋一
  • Organizer: 日本ゲノム編集学会第2回大会
• [Presentation] トランスポゾン関連ドメインをもつ新規遺伝子サイレンシング因子の同定 (2017)
  • Author(s): Ikeda, Y., Pélissier, T., Bourguet, P., Becker, C., Pouch-Pélissier, M. N., Pogorelcnik, R., Weingartner, M., Weigel, D., Deragon, J. M. and Mathieu, O.
  • Organizer: 日本遺伝学会第89回大会
• [Presentation] オオムギの形質転換効率に関わる遺伝子単離に向けたDNAマーカー開発 (2017)
  • Author(s): 久野 裕1、宗森 広美1、元井 由加1、新海 典夫2、瀬々 潤2、豊田 敦3、佐藤 和広
  • Organizer: 日本育種学会第131回講演会
• [Presentation] RNA配列設計のための情報解析技術 (2017)
  • Author(s): 浅井潔
  • Organizer: 日本核酸医薬学会第3回年会
• [Presentation] 異なる水稲品種による群落が大気の熱環境に及ぼす影響 (2017)
  • Author(s): 伊川浩樹, 桑形恒男
  • Organizer: 日本気象学会2017年度秋季大会
• [Presentation] モデル寄生植物コシオガマの変異体原因遺伝子同定 (2017)
  • Author(s): Songkui Cui、重信秀治、西山智明、柴田朋子、長谷部光泰、白須賢、吉田聡子
  • Organizer: 日本植物学会
• [Presentation] CRISPR/Cas9による、ヒメミカヅキモの性特異的受容体型タンパク質の機能解析 (2017)
  • Author(s): 神田奈保、今詩織、藤原安理、西山智明、土金勇樹、関本弘之
  • Organizer: 日本植物学会第81回大会
• [Presentation] パルマ藻Triparma Iaevisの細胞壁形成機構の解析 (2017)
  • Author(s): 吉川伸哉, 佐藤晋也, 山崎誠司, 一柳紀凛, 山田和正, 一宮睦雄, 斉藤 憲治, 中村 洋路, 佐藤直樹, 桑田 晃
  • Organizer: 日本植物学会第81回大会
• [Presentation] ヒメミカヅキモの性決定におけるCpMinusl遺伝子の逆遺伝学的解析 (2017)
  • Author(s): 露木奈津美、神田奈保、小宮あゆみ、川井絢子、土金勇樹、西山智明、関本弘之
  • Organizer: 日本植物学会第81回大会
• [Presentation] 珪藻の進化・繁栄の謎を握る未知の藻類 : パルマ藻の多様性と全球分布 (2017)
  • Author(s): 桑田 晃, 一宮睦雄, 吉川伸哉, Daniel Vaulot, Adriana Lopes dos Santos
  • Organizer: 日本植物学会第81回大会
• [Presentation] 性特異的遺伝子から明らかにするミカヅキモの進化 (2017)
  • Author(s): 土金 勇樹, 土松 隆志, Shakya Mangal Man, 関本 弘之
  • Organizer: 日本植物学会第81回大会
• [Presentation] 同質六倍体サツマイモ栽培種のゲノム解読に向けた取り組み (2017)
  • Author(s): 白澤健太, 長崎英樹, 田中 勝, 岡田吉弘, 髙畑康浩, 平川英樹, 磯部祥子
  • Organizer: 日本植物学会第81回大会シンポジウム
• [Presentation] Ethylene signaling controls haustorium development in parasitic plant Phtheirospermum japonicum (2017)
  • Author(s): Songkui Cui, Ken Shirasu, Satoko Yoshida
  • Organizer: 日本植物生理学会
• [Presentation] Host lignin composition affects haustorium induction in parasitic plants (2017)
  • Author(s): Songkui Cui, Syogo Wada, Yuki Tobimatsu, Yuri Takeda, Toshiyuki Takano, Toshiaki Umezawa, Ken Shirasu and Satoko Yoshida
  • Organizer: 日本植物生理学会
• [Presentation] 大腸菌進化実験による進化的制約の解析 (2017)
  • Author(s): 古澤力, 前田智也, 堀之内貴明
  • Organizer: 日本進化学会第19回大会
• [Presentation] HLAおよびKIR 遺伝子のシークエンシング (2017)
  • Author(s): 細道一善
  • Organizer: 日本人類遺伝学会 第62回大会 シンポジウム18
• [Presentation] 古代ゲノム解析から推定される北アジアの人類集団史 (2017)
  • Author(s): 佐藤丈寛、安達登、木村亮介、米田穣、太田博樹、田嶋敦、豊田敦、松前ひろみ、小金渕佳江、清水健太郎、埴原恒彦、ウェーバー・アンジェイ、加藤博文、石田肇
  • Organizer: 日本人類遺伝学会第62回大会
• [Presentation] 線虫の温度馴化に関わる自然多型遺伝子のマッピングとカリウムチャネルKQTの解析 (2017)
  • Author(s): 岡畑美咲、太田茜、水口洋平、豊田敦、久原篤
  • Organizer: 日本動物学会第88回年会
• [Presentation] Beta-oxidation of fatty acid metabolism through HADH is required for cold acclimation of C. elegans (2017)
  • Author(s): Shiori Sakai, Yohei Minakuchi, Atsushi Toyoda, Akane Ohta, Atsushi Kuhara
  • Organizer: 日本比較生理生化学会年会
• [Presentation] 変異蓄積マウス系統は、放射線の遺伝影響を理解するための新たな方法論を提供する (2017)
  • Author(s): 内村有邦、樋口真弓、水口洋平、福村龍太郎、西野穣、豊田敦、権藤洋一、八木健
  • Organizer: 日本放射線影響学会第60回大会
• [Presentation] Genetic analysis of natural variants and identification of novel genes for cold acclimation (2017)
  • Author(s): Misaki Okahata, Iseki Toshihiro, Aguan D. Wei, Yohei Minakuchi, Atsushi Toyoda, Akane Ohta, Atsushi Kuhara
  • Organizer: 分子生物学会
• [Presentation] Transcriptome analysis identify genes involved in cold acclimation of C. elegans (2017)
  • Author(s): Shiori Sakai, Mayu Fujita, Misaki Okanata, Yohei Minakuchi, Atsushi Toyoda, Akane Ohta, Atsushi Kuhara
  • Organizer: 分子生物学会
• [Presentation] 無変態昆虫マダラシミの胚発生期では、幼若ホルモン関連遺伝子群がどのように発現しているのか. (2017)
  • Author(s): 峯村俊儀・大出高弘・新美輝幸・塩月孝博・大門高明
  • Organizer: 平成30年度 蚕糸・昆虫機能利用学術講演会-日本蚕糸学会第88回大会-
• [Presentation] 魚が宇宙で過ごすとどうなるの?～宇宙滞在実験の結果より～ (2017)
  • Author(s): 佐藤文規、Choi Minyong、王梓、岩瀬海里、今村聖実、堀内映美、内田智子、谷垣文章、村谷匡史、小林純也、髙橋昭久、菅野純夫、鈴木穣、川上浩一、瀬原淳子
  • Organizer: 2017年度生命科学系学会合同年次大会(ConBio2017)
• [Presentation] Allelic imbalance analysis based on haplotype-specific transcripts in F1 reciprocal cross in pepper. (2017)
  • Author(s): Andrea Ghelfi, Kenta Shirasawa, Hideki Hirakawa, Sachiko Isobe, Munetaka Hosokawa
  • Organizer: 第7回植物RNA研究ネットワークシンポジウム
• [Presentation] 宇宙滞在が骨格筋に及ぼす影響-重力負荷減少だけではなさそう? (2017)
  • Author(s): 佐藤文規、Choi Minyong、王梓, 岩瀬海里、今村聖実、堀内映美、内田智子、小林純也、髙橋昭久、菅野純夫、鈴木穣、川上浩一、瀬原淳子
  • Organizer: 日本宇宙生物科学会第31回大会
• [Book] 実験医学 (2018)
  • Author(s): 山岸潤也, Lucky Runtuwene, 林田京子, 鈴木 穣
  • Publisher: 羊土社
• [Book] 実験医学 (2018)
  • Author(s): 坂本祥駿, 勝俣恵理, 関真秀, 鈴木穣
  • Publisher: 羊土社
• [Book] Animal Models for the Study of Human Disease, Second Edition (2017)
  • Author(s): Yoichi Gondo, Shigeru Makino, Ryutaro Fukumura
  • Pages: 727-752
  • Total Pages: 1177
  • Publisher: Academic Press
• [Book] Avian Reproduction (2017)
  • Author(s): Asato Kuroiwa
  • Pages: 13
  • Total Pages: 214
  • Publisher: Springer
• [Book] Deversity and Evolution of Butterfly Wing Patterns (2017)
  • Author(s): Fujiwara, H.
  • Pages: 189-201
  • Total Pages: 320
  • Publisher: Springer Open
• [Book] Promoter Associated RNA (2017)
  • Author(s): Nobuhiko Hamazaki, Kinichi Nakashima, Takuya Imamura
  • Pages: 12
  • Total Pages: 283
  • Publisher: Springer Protocols
• [Book] Zygotic Genome Activation (2017)
  • Author(s): Nobuhiko Hamazaki, Kinichi Nakashima, Katsuhiko Hayashi, Takuya Imamura
  • Pages: 22
  • Total Pages: 271
  • Publisher: Springer Protocols
• [Book] 化学療法の領域 次世代シーケンサが可能にした感染学の新しい展開 (2017)
  • Author(s): 林哲也
  • Pages: 特集の企画2ページ
  • Total Pages: 216
  • Publisher: 医薬ジャーナル社
• [Book] 化学療法の領域 次世代シーケンサが可能にした感染学の新しい展開 (2017)
  • Author(s): 後藤恭宏
  • Pages: 10
  • Total Pages: 216
  • Publisher: 医薬ジャーナル社
• [Book] 化学療法の領域 次世代シーケンサが可能にした感染学の新しい展開 (2017)
  • Author(s): 小椋義俊
  • Pages: 11
  • Total Pages: 216
  • Publisher: 医薬ジャーナル社
• [Book] チョウの斑紋多様性と進化一統合的アプローチ (2017)
  • Author(s): 藤原晴彦
  • Pages: 306-323
  • Total Pages: 375
  • Publisher: 海游舎
• [Book] 遺伝子発現制御機構 クロマチン, 転写制御, エピジェネティクス (2017)
  • Author(s): 黒柳秀人
  • Pages: 5
  • Total Pages: 264
  • Publisher: 東京化学同人
• [Book] 化学療法の領域 組成解析(真菌) (2017)
  • Author(s): 高橋弘喜
  • Pages: 105-9
  • Publisher: 医薬ジャーナル社
• [Book] 最新遺伝医学研究と遺伝カウンセリング、遺伝子医学MOOK別冊 (2017)
  • Author(s): 森下真一
  • Publisher: メディカルドゥ
• [Book] 細胞 臨時増刊号 日常化するシングルセル遺伝子発現解析 (2017)
  • Author(s): 鹿島幸恵, 鈴木絢子, 関真秀, 鈴木穣
  • Publisher: 北隆館/ニュー・サイエンス社
• [Book] 実験医学別冊 エピジェネティクス実験スタンダード (2017)
  • Author(s): 鹿島幸恵, 鈴木絢子, 関 真秀, 鈴木 穣
  • Pages: 10
  • Total Pages: 395
  • Publisher: 羊土社
• [Book] 実験医学別冊シングルセル解析プロトコール (2017)
  • Author(s): 菅野純夫/編
  • Total Pages: 345
  • Publisher: 羊土社
• [Book] 東京大学ゲノム医科学研究機構 監修 「ゲノム医科学 -医療ビッグデータの活用とゲノム医療の実践-」 (2017)
  • Author(s): 森下真一
  • Publisher: 南山堂
• [Remarks] 領域ホームページ
  • URL: https://www.genome-sci.jp/
• [Remarks] minialign
  • URL: https://github.com/ocxtal/minialign
• [Remarks] libgaba
  • URL: https://github.com/ocxtal/libgaba
• [Remarks] SonicParanoid
  • URL: http://iwasakilab.bs.s.u-tokyo.ac.jp/sonicparanoid/
• [Remarks] DEclust
  • URL: http://www.dna.bio.keio.ac.jp/software/DEclust/
• [Remarks] COSMOS
  • URL: http://seselab.org/cosmos/
• [Remarks] DFAST
  • URL: https://dfast.nig.ac.jp/
• [Remarks]
  • URL: https://github.com/nigyta/dfast_core
• [Remarks] Sprai
  • URL: http://zombie.cb.k.u-tokyo.ac.jp/sprai/
• [Remarks] L-MiGAP
  • URL: https://www.migap.org/
• [Remarks] VITCOMIC2
  • URL: http://vitcomic.org/
• [Remarks] Functree2.0
  • URL: https://bioviz.tokyo/functree/
• [Remarks] MarpolBase
  • URL: http://marchantia.info/
• [Remarks] LncRRIdb
  • URL: http://rtools.cbrc.jp/LncRRIdb/
• [Remarks] DBTSS
  • URL: https://dbtss.hgc.jp/
• [Remarks] DBKERO
  • URL: http://kero.hgc.jp/
• [Remarks] AgIn
  • URL: https://github.com/hacone/AgIn
• [Remarks] EAGLE
  • URL: https://github.com/tony-kuo/eagle
• [Remarks] Survival LAMP
  • URL: https://rtrelator.github.io/SurvivalLAMP/
• [Remarks]
  • URL: http://bioviz.tokyo/functree2
• [Patent(Industrial Property Rights)] 早期大腸癌の検出方法 (2017)
  • Inventor(s): 山田拓司, 福田真嗣, 谷内田真一
  • Industrial Property Number: C12Q 1/68
  • Overseas