先進ゲノム解析研究推進プラットフォーム

2018 Fiscal Year Annual Research Report

• Project/Area Number: 16H06279
• Research Institution: National Institute of Genetics
• Principal Investigator: 小原 雄治 国立遺伝学研究所, 先端ゲノミクス推進センター, 特任教授 (70135292)
• Co-Investigator(Kenkyū-buntansha): 加藤 和人 大阪大学, 大学院医学系研究科, 教授 (10202011) ; 川嶋 実苗 国立研究開発法人科学技術振興機構, バイオサイエンスデータベースセンター, 研究員 (00396706) ; 豊田 敦 国立遺伝学研究所, 生命情報研究センター, 特任教授 (10267495) ; 鈴木 穣 東京大学, 大学院新領域創成科学研究科, 教授 (40323646) ; 三井 純 東京大学, 医学部附属病院, 特任准教授 (70579862) ; 林 哲也 九州大学, 大学院医学研究院, 教授 (10173014) ; 時野 隆至 札幌医科大学, 医学部, 教授 (40202197) ; 黒川 顕 国立遺伝学研究所, 生命情報研究センター, 教授 (20343246) ; 中村 保一 国立遺伝学研究所, 生命情報研究センター, 教授 (60370920) ; 野口 英樹 大学共同利用機関法人情報・システム研究機構(機構本部施設等), データサイエンス共同利用基盤施設, 特任教授 (50333349) ; 高木 利久 東京大学, 大学院理学系研究科, 教授 (30110836) ; 岩崎 渉 東京大学, 大学院理学系研究科, 准教授 (50545019) ; 森下 真一 東京大学, 大学院新領域創成科学研究科, 教授 (90292854) ; 浅井 潔 東京大学, 大学院新領域創成科学研究科, 教授 (30356357) ; 笠原 雅弘 東京大学, 大学院新領域創成科学研究科, 講師 (60376605) ; 伊藤 武彦 東京工業大学, 生命理工学院, 教授 (90501106) ; 山田 拓司 東京工業大学, 生命理工学院, 准教授 (10437262) ; 小椋 義俊 九州大学, 大学院医学研究院, 准教授 (40363585) ; 久原 哲 九州大学, 大学院農学研究院, 名誉教授 (00153320) ; 高橋 弘喜 千葉大学, 真菌医学研究センター, 准教授 (60548460) ; 瀬々 潤 国立研究開発法人産業技術総合研究所, 人工知能研究センター, 研究チーム長 (40361539) ; 榊原 康文 慶應義塾大学, 理工学部, 教授 (10287427)
• Project Period (FY): 2016 – 2021
• Keywords: 次世代DNAシーケンサー / 新規ゲノム配列決定 / リシーケンシング / エピゲノム / RNA-Seq / 1細胞解析 / メタゲノム解析 / スーパーコンピューター

Outline of Annual Research Achievements

①総括支援活動では、支援課題の公募について、審査委員(すべて領域外)を増員して二段階審査とし、経費上限設定などによりできるだけ多くの採択ができるように努めた結果、応募281件から136件を支援課題とし採択した(採択率48.4%)。支援課題は科研費生物系のほぼすべての領域に渡っており、支援の成果を含む論文として2018年度に104報が発表された(研究発表欄に記載)。この中には、大脳の神経幹細胞分化機構解明、テントウムシの斑紋形成機構解明、古人骨全ゲノム解析から東南アジアと日本列島における人類集団の起源の解明、正常子宮内膜でのがん関連遺伝子変異の同定、日本人集団のHLA遺伝子型の全容を解明など、広い分野でのレベルの高い成果が含まれている。
②大規模配列解析拠点ネットワーク支援活動においては、最先端技術を支援に提供するとともに、それらの整備や高度化を進めた。遺伝研拠点では染色体の配列完成を目指して、長鎖シーケンサー(PacBio Sequel、Nanopore)、長鎖DNA試料調製技術、HiC解析技術の最適化、東大柏拠点では、Nanoporeを用いた一連の要素技術開発、九大拠点では微生物ゲノムのNGS解析最適化、札幌医大拠点ではLiquid Biopsyによる低頻度変異検出技術開発、等を進めた。
③高度情報解析支援ネットワーク活動では、支援から浮かび上がった課題を解決するソフトウェアの開発を進め、それらの論文発表や実際の課題への適用を進めた。2018年度は、相同染色体を「分けて」アセンブル出力するPlatanus-alleeの論文化、高速オルソログ同定プログラムSonicParanoid、環境から微生物を、微生物から環境を予測するツールLEA、ゲノム変異の高精度なランキングソフトEAGLE、微生物ゲノムアノテーションパイプラインDFAST、ロングリード向けアラインメントツールminialignなどの開発・高度化が進んだ。これらの成果として22報の論文発表がなされた。

Current Status of Research Progress

2: Research has progressed on the whole more than it was originally planned.

Reason

・研究支援代表の下、研究支援分担者22名、研究支援協力者27名、総勢50名の班員が全国18の大学・研究機関(部局数は27)から参加して、支援及びそのための技術高度化を進めることができた。国立遺伝学研究所を中核機関とする連携ネットワークを形成して、支援を進めた。
・支援課題公募については、透明性を確保するために審査委員会は領域外有識者のみとし、班員からの技術的・経費的な情報提供を参考に支援課題を決定した。具体的には、支援依頼者には支援技術6区分(新規ゲノム、変異解析、修飾解析、RNA解析、メタゲノム、超高感度解析)と解析対象6区分(ヒト、マウス、マウス以外動物、植物、微生物)の組み合わせから審査区分を選んで申請してもらい、各組合せに審査委員会を置き、支援が効果的である課題候補を選考した。全審査区分からの課題候補を審査委員会主査会議で全体調整をして、さらに班員による候補課題の内容聞取り情報を参考にして支援課題を決定した。支援希望内容は拡大する傾向にあるが、経費上限の設定などによりできるだけ多く支援するように努め、採択率を約50%近くに維持することができた。科研費のほほぼ全種目、生物系のほぼ全領域から課題採択できているが、同程度の評価の場合は若手・女性・少額科研費からの申請及び初めての申請を優先するなどの措置をとり、多様な課題を採択できた。支援成果を含む論文発表は2018年度は104報と順調に増えている。
・支援技術の高度化のための活動も大規模DNAシーケンシング支援、高度情報解析支援共に進めることができ、高度化の論文は22報発表された。
・拡大班会議を開催し、支援依頼者の若手共同研究者の旅費援助をするなどして、支援側と依頼者の交流を深めることができた。
・情報解析講習会を初級、中級2回開催し、また解析パイプラインを整備するなど、支援依頼者が自力で解析できるように技術移転を進めた。

Strategy for Future Research Activity

・最先端の技術をより多く提供するために、支援技術の高度化を進めることが重要である。ゲノム解析は技術進展のスピードが特に速く、2-3年で解析手法が様変わりするために、新たなDNAシーケンシング技術の導入・開発、目的に沿った情報解析技術の開発と整備が中心になる。
・支援課題の採択率は、現状は予算の制限から50%にとどまっており、より多い課題の支援が求められる。現状では、各支援課題の支援経費の上限を設けて、これを超す分は経費負担を求める形にすることで、ようやくこの採択率になっている。解析内容を精査する効果はあるが、一方でゲノム解析においては一定規模以上で支援しないと意味のある結果が出ないことも多く、若手をはじめ、経費面で敷居が高くなるケースもある。そのためにも技術高度化により、より効果的な解析技術の整備やコスト削減を図っていく必要がある。
・大量データ解析の支援要望はますます増加していることから、解析パイプラインの整備とともに、情報解析講習会の開催を継続拡充する必要がある。

Research Products

• [Int'l Joint Research] Baylor College of Medicine/City University of New York/Fred Hutchinson Cancer Research Center（米国）
  • Country Name: U.S.A.
  • Counterpart Institution: Baylor College of Medicine/City University of New York/Fred Hutchinson Cancer Research Center
  • # of Other Institutions: 18
• [Int'l Joint Research] European Molecular Biology Laboratory/German Cancer Research Center/Heinrich Heine University（ドイツ）
  • Country Name: GERMANY
  • Counterpart Institution: European Molecular Biology Laboratory/German Cancer Research Center/Heinrich Heine University
  • # of Other Institutions: 15
• [Int'l Joint Research] Universitas Airlangga/University of Indonesia/Merauke City General Hospital（インドネシア）
  • Country Name: INDONESIA
  • Counterpart Institution: Universitas Airlangga/University of Indonesia/Merauke City General Hospital
  • # of Other Institutions: 6
• [Int'l Joint Research] University of Trento/University of Turin/European Institute of Oncology（イタリア）
  • Country Name: ITALY
  • Counterpart Institution: University of Trento/University of Turin/European Institute of Oncology
  • # of Other Institutions: 4
• [Int'l Joint Research] University of Oxford/University of Cambridge/John Innes Centre（英国）
  • Country Name: UNITED KINGDOM
  • Counterpart Institution: University of Oxford/University of Cambridge/John Innes Centre
  • # of Other Institutions: 3
• [Int'l Joint Research]
  • # of Other Countries: 32
• [Journal Article] CNV analysis using whole exome sequencing identified biallelic CNVs of VPS13B in siblings with intellectual disability. (2020)
  • Author(s): Enomoto Y, Tsurusaki Y, Yokoi T, Abe-Hatano C, Ida K, Naruto T, Mitsui J, Tsuji S, Morishita S, Kurosawa K.
  • Journal Title: Eur J Med Genet. Volume: 63 Issue: 1 Pages: 103610
  • DOI: 10.1016/j.ejmg.2018.12.015
  • Peer Reviewed
• [Journal Article] Platanus-allee is a de novo haplotype assembler enabling a comprehensive access to divergent heterozygous regions. (2019)
  • Author(s): Kajitani, R., D. Yoshimura, M. Okuno, Y. Minakuchi, H. Kagoshima, A. Fujiyama, K. Kubokawa, Y. Kohara, A. Toyoda and T. Itoh
  • Journal Title: Nat Commun Volume: 10 Issue: 1 Pages: 1702
  • DOI: 10.1038/s41467-019-09575-2
  • Peer Reviewed / Open Access
• [Journal Article] Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer (2019)
  • Author(s): Jakob Wirbel, Paul Theodor Pyl, Ece Kartal, Konrad Zych, Alireza Kashani, Alessio Milanese, Jonas S Fleck, Anita Y Voigt, Albert Palleja, Ruby Ponnudurai, Shinichi Sunagawa, Luis Pedro Coelho, Petra Schrotz-King, Emily Vogtmann, Nina Habermann, Emma Nimeus, Andrew M Thomas, Paolo Manghi, Sara Gandini, Davide Serrano, Sayaka Mizutani, Hirotsugu Shiroma, Georg Zeller, et al.
  • Journal Title: Nature Madicine Volume: 25 Pages: 679-689
  • DOI: 10.1038/s41591-019-0406-6
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Phylogeographic characteristics of hypervariable regions in the mitochondrial genome of a cosmopolitan, bloom-forming raphidophyte, Heterosigma akashiwo (2019)
  • Author(s): Ueki, S
  • Journal Title: Journal of Phycology Volume: 55 Issue: 4 Pages: 858-867
  • DOI: 10.1111/jpy.12868
  • Peer Reviewed / Open Access
• [Journal Article] Effective therapeutic regimens in two South Asian countries with high resistance to major Helicobacter pylori antibiotics. (2019)
  • Author(s): Miftahussurur M, Aftab H, Shrestha PK, Sharma RP, Subsomwong P, Waskito LA, Doohan D, Fauzia KA, Yamaoka Y.
  • Journal Title: Antimicrob Resist Infect Control. Volume: 8 Pages: 40
  • DOI: 10.1186/s13756-019-0482-x
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] FuncTree2 : an interaotive radial tree for functional hierarchies and omics data visualization (2019)
  • Author(s): Y Darzi, Y Yamate, T Yamada
  • Journal Title: Bioinformatics Pages: btz245
  • DOI: 10.1093/bioinformatics/btz245
  • Peer Reviewed / Open Access
• [Journal Article] SonicParanoid : fast, accurate and easy orthology inference. (2019)
  • Author(s): Salvatore Cosentino and Wataru Iwasaki.
  • Journal Title: Bioinformatics Volume: 35 Pages: 149-151
  • DOI: 10.1093/bioinformatics/bty631
  • Peer Reviewed / Open Access
• [Journal Article] Epigenetic control of early dendritic cell lineage specification by the transcription factor IRF8 in mice (2019)
  • Author(s): Kurotaki D, Kawase W, Sasaki H, Nakabayashi J, Nishiyama A, Morse HC Ⅲ, Ozato K, Suzuki Y, Tamura T
  • Journal Title: Blood Volume: 133 Pages: 1803-1813
  • DOI: 10.1182/blood-2018-06-857789
  • Peer Reviewed / Int'l Joint Research
• [Journal Article] reactIDR : Evaluation of the statistical reproducibility of high-throughput structural analyses towards a robust RNA structure prediction (2019)
  • Author(s): Risa Kawaguchi, Hisanori Kiryu, Junichi Iwakiri, Jun Sese
  • Journal Title: BMC Bioinformatics Volume: 20 Issue: 3 Pages: 130
  • DOI: 10.1186/s12859-019-2645-4
  • Peer Reviewed / Open Access
• [Journal Article] Whole-exome sequencing in a Japanese pedigree implicates a rare non-synonymous single-nucleotide variant in BEST3 as a candidate for mandibular prognathism. (2019)
  • Author(s): Kajii TS, Oka A, Saito F, Mitsui J, Iida J.
  • Journal Title: Bone. Volume: 122 Pages: 193-198
  • DOI: 10.1016/j.bone.2019.03.004
  • Peer Reviewed
• [Journal Article] Disruption of Endolysosomal RAB5/7 Efficiently Eliminates Colorectal Cancer Stem Cells. (2019)
  • Author(s): Takeda, M., Koseki, J., Takahashi, H., Miyoshi, N., Nishida, N., Nishimura, J., Hata, T., Matsuda, C., Mizushima, T., Yamamoto, H., Ishii, H., Doki, Y., Mori, M., Haraguchi, N.
  • Journal Title: Cancer Res. Volume: 79 Pages: 1426-1437
  • DOI: 10.1158/0008-5472.CAN-18-2192
  • Peer Reviewed / Open Access
• [Journal Article] Mitochondrial pyruvate carrier 1 expression controls cancer EMT and radioresistance. (2019)
  • Author(s): Takaoka, Y., Konno, M., Koseki, J., Colvin, H., Asai, A., Tamari, K., Satoh, T., Mori, M., Doki, Y., Ogawa, K., Ishii, H.
  • Journal Title: Cancer Sci. Volume: 110 Pages: 1331-1339
  • DOI: 10.1111/cas.13980
  • Peer Reviewed / Open Access
• [Journal Article] Molecular and Cellular Network Systems Underlying Cold Tolerance of Caenorhabditis elegans (2019)
  • Author(s): Kohei OHNISHI, Natsune TAKAGAKI, Misaki OKAHATA, Mayu FUJITA, Akane OHTA, Atsushi KUHARA
  • Journal Title: Cryobiology and Cryotechnology Volume: 64 Pages: 53-59
  • DOI: 10.20585/cryobolcryotechnol.64.2_53
  • Peer Reviewed
• [Journal Article] Dynamic chromatin organization without the 30-nm fiber. (2019)
  • Author(s): Maeshima, K., Ide, S., Babokhov, M.
  • Journal Title: Current Opinion in Cell Biology Volume: 58 Pages: 95-104
  • DOI: 10.1016/j.ceb.2019.02.003
  • Peer Reviewed / Open Access
• [Journal Article] Evaluation and application of RNA-Seq by MinION. (2019)
  • Author(s): Seki M, Katsumata E, Suzuki A, Sereewattanawoot S, Sakamoto Y, Mizushima-Sugano J, Sugano S, Kohno T, Frith MC, Tsuchihara K, Suzuki Y.
  • Journal Title: DNA research Volume: 26 Pages: 55-65
  • DOI: 10.1093/dnares/dsy038
  • Peer Reviewed / Open Access
• [Journal Article] Mdm2-p53-SF1 pathway in ovarian granulosa cells directs ovulation and fertilization by conditining oocyte quality. (2019)
  • Author(s): Haraguchi H, Hirota Y, Saito-Fujita T, Tanaka T, Shimizu-Hirota R, Harada M, Akaeda S, Hiraoka T, Matsuo M, Matsumoto L, Hirata T, Koga K, Wada-Hiraike O, Fujii T, Osuga Y.
  • Journal Title: FASEB J Volume: 33 Pages: 2610-2620
  • DOI: 10.1096/fj.201801401R
  • Peer Reviewed
• [Journal Article] PDH-mediated metabolic flow is critical for skeletal muscle stem cell differentiation and myotube formation during regeneration in mice. (2019)
  • Author(s): Hori S, Hiramuki Y, Nishimura D, Sato F, Sehara-Fujisawa A.
  • Journal Title: FASEB Journal
  • DOI: 10.1096/fj.201802479R
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Genome Features and Secondary Metabolites Biosynthetic Potential of the Class Ktedonobacteria (2019)
  • Author(s): Yu ZHENG, Ayana Saitou, Chiung-Mei Wang, Atsushi Toyoda, Yohei Minakuchi, Yuji Sekiguchi, Kenji Ueda, Hideaki Takano, Yasuteru Sakai, Keietsu Abe, Akira Yokota and Shuhei Yabe
  • Journal Title: Frontiers in Microbiology Volume: 10 Pages: 893
  • DOI: 10.3389/fmicb.2019.00893
  • Peer Reviewed / Open Access
• [Journal Article] Molecular Basis of White Adipose Tissue Remodeling That Precedes and Coincides With Hibernation in the Syrian Hamster, a Food-Storing Hibernator. (2019)
  • Author(s): Chayama Y, Ando L, Sato Y, Shigenobu S, Anegawa D, Fujimoto T, Taii H, Tamura Y, Miura M, Yamaguchi Y.
  • Journal Title: Frontiers in Physiology Volume: 9 Pages: 1973
  • DOI: 10.3389/fphys.2018.01973
  • Peer Reviewed / Open Access
• [Journal Article] Reactive Oxygen Species (ROS) Generation Is Indispensable for Haustorium Formation of the Root Parasitic Plant Striga Hermonthica (2019)
  • Author(s): Wada, S., Cui, S. and Yoshida, S.
  • Journal Title: Frontiers Plant Science Volume: 10 Pages: 328
  • DOI: 10.3389/fpls.2019.00328
  • Peer Reviewed / Open Access
• [Journal Article] DOT1L inhibition blocks multiple myeloma cell proliferation by suppressing IRF4-MYC signaling (2019)
  • Author(s): Ishiguro K., Kitajima H., Niinuma T., Ishida T., Maruyama R., Ikeda H., Hayashi T., Sasaki H., Wakasugi H., Nishiyama K., Shindo T., Yamamoto E., Kai M., Sasaki Y., Tokino T., Nakase H., Suzuki H.
  • Journal Title: Haematologica Volume: 104 Pages: 155-165
  • DOI: 10.3324/haematol.2018.191262
  • Peer Reviewed / Open Access
• [Journal Article] Alternative eradication regimens for Helicobacter pylori infection in Indonesian regions with high metronidazole and levofloxacin resistance. (2019)
  • Author(s): Miftahussurur M, Waskito LA, Syam AF, Nusi IA, Siregar G, Richardo M, Bakry AF, Rezkitha YAA, Wibawa IDN, Yamaoka Y.
  • Journal Title: Infect Drug Resist. Volume: 12 Pages: 345-358
  • DOI: 10.2147/IDR.S187063
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Goldfish : An old and new model system to study vertebrate development, evolution, and human disease. (2019)
  • Author(s): Omori Y, Kon T
  • Journal Title: J Biochem Volume: 165 Pages: 209-218
  • DOI: 10.1093/jb/mvy076
  • Peer Reviewed / Open Access
• [Journal Article] A subset of diffuse-type gastric cancer is susceptible to mTOR inhibitors and checkpoint inhibitors (2019)
  • Author(s): Fukamachi H., Kim S., K., Koh J., Lee H. S., Sasaki Y., Yamashita K., Nishikawaji T., Shimada S., Akiyama Y., Byeon S. J., Bae D. H., Okuno K., Nakagawa M., Tanioka T., Inokuchi M., Kawachi H., Tsuchiya K., Kojima K., Tokino T., Eishi Y., Kim Y. S., Kim W. H., Yuasa Y., Tanaka S.
  • Journal Title: J Exp Clin Cancer Res Volume: 38 Pages: 127
  • DOI: 10.1186/s13046-019-1121-3
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Thioredoxin o-mediated reduction of mitochondrial alternative oxidase in the thermogenic skunk cabbage Symplocarpus renifolius. (2019)
  • Author(s): Umekawa Y, Ito K
  • Journal Title: Journal of Biochemistry Volume: 165 Pages: 57-65
  • DOI: 10.1093/jb/mvy082
  • Peer Reviewed / Open Access
• [Journal Article] Single nucleosome imaging reveals loose genome chromatin networks via active RNA polymerase Ⅱ. (2019)
  • Author(s): Nagashima, R., Hibino, K., Ashwin, S. S., Babokhov, M., Fujishiro, S., Imai, R., Nozaki, T., Tamura, S., Tani, T., Kimura, H., Shribak, M., Kanemaki, M. T., Sasai, M., Maeshima, K.
  • Journal Title: Journal of Cell Biology Volume: 218 Issue: 5 Pages: 1511-1530
  • DOI: 10.1083/jcb.201811090
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Transcriptome-wide identification of A-to-I RNA editing sites using ICE-seq (2019)
  • Author(s): Shunpei Okada, Hiroki Ueda, Yuta Noda, Tsutomu Suzuki
  • Journal Title: Methods Volume: 156 Pages: 66-78
  • DOI: 10.1016/j.ymeth.2018.12.007
  • Peer Reviewed / Open Access
• [Journal Article] Malignant paraganglioma of the posterior mediastinum : A case report with genetic analysis (2019)
  • Author(s): Adachi Y., Mita H., Sasaki Y., Himori R., Onodera K., Nakamura M., Kikuchi T., Yamashita K., Yoshida Y., Ishii Y., Endo T.
  • Journal Title: Mol Clin Oncol Volume: 10 Pages: 10-16
  • DOI: 10.3892/mco.2018.1758
  • Peer Reviewed / Open Access
• [Journal Article] Functional divergence of a heterochromatin-binding protein during stickleback speciation. (2019)
  • Author(s): Yoshida K, Ishikawa A, Toyoda A, Shigenobu S, Fujiyama A, Kitano J.
  • Journal Title: Mol Ecol. Volume: 28 Issue: 6 Pages: 1563-1578
  • DOI: 10.1111/mec.14841
  • Peer Reviewed
• [Journal Article] Metaepigenomic analysis reveals the unexplored diversity of DNA methylation in an environmental prokaryotic community. (2019)
  • Author(s): Hiraoka S, Okazaki Y, Anda M, Toyoda A, Nakano SI, Iwasaki W.
  • Journal Title: Nat Commun. Volume: 10 Issue: 1 Pages: 159
  • DOI: 10.1038/s41467-018-08103-y
  • Peer Reviewed / Open Access
• [Journal Article] The CENP-A centromere targeting domain facilitates H4K20 monomethylation in the nucleosome by structural polymorphism. (2019)
  • Author(s): Arimura Y, Tachiwana H, Takagi H, Hori T, Kimura H, Fukagawa T, Kurumizaka H.
  • Journal Title: Nature Commun Volume: 10 Pages: 576
  • DOI: 10.1038/s41467-019-08314-x
  • Peer Reviewed / Open Access
• [Journal Article] Genetic and phenotypic landscape of the MHC region in the Japanese population (2019)
  • Author(s): Jun Hirata, Kazuyoshi Hosomichi, Saori Sakaue, Masahiro Kanai, Hirofumi Nakaoka, Kazuyoshi Ishigaki, Ken Suzuki, Masato Akiyama, Toshihiro Kishikawa, Kotaro Ogawa, Tatsuo Masuda, Kenichi Yamamoto, Ituro Inoue, Yoichiro Kamatani, Yukinori Okada, 他4名
  • Journal Title: Nature Genetics Volume: 51 Pages: 470-480
  • DOI: 10.1038/s41588-018-0336-0
  • Peer Reviewed / Int'l Joint Research
• [Journal Article] Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation (2019)
  • Author(s): Andrew Maltez Thomas, Paolo Manghi, Francesco Asnicar, Edoardo Pasolli, Federica Armanini, Moreno Zolfo, Francesco Beghini, Serena Manara, Nicolai Karcher, Chiara Pozzi, Sara Gandini, Davide Serrano, Sonia Tarallo, Antonio Francavilla, Gaetano Gallo, 他25名
  • Journal Title: Nature medicine Volume: 25 Pages: 667-678
  • DOI: 10.1038/s41591-019-0405-7
  • Peer Reviewed / Int'l Joint Research
• [Journal Article] The Structural Integrity of Lignin Is Crucial for Resistance against Striga hermonthica Parasitism in Rice (2019)
  • Author(s): Mutuku, J.M., Cui, S., C., Hori, Takeda, Y., Tobimatsu, Y., Nakabayashi, R., Mori, T., Saito, K., Demura, T., Umezawa, T., Yoshida, S., Shirasu, K.
  • Journal Title: Plant Physiol. Volume: 179 Pages: 1796-1809
  • DOI: 10.1104/pp.18.01133
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Alternative oxidase capacity of mitochondria in microsporophylls may function in cycad thermogenesis (2019)
  • Author(s): Yasuko Ito-Inaba, Mayuko Sato, Mitsuhiko P. Sato, Yuya Kurayama, Haruna Yamamoto, Mizuki Ohata, Yoshitoshi Ogura, Tetsuya Hayashi, Kiminori Toyooka, Takehito Inaba
  • Journal Title: Plant Physiology Pages: 00150.2019
  • DOI: 10.1104/pp.19.00150
  • Peer Reviewed / Open Access
• [Journal Article] Possible cross-feeding pathway of facultative methylotroph Methyloceanibacter caenitepidi Gela4 on methanotroph Methylocaldum marinum S8. (2019)
  • Author(s): Mio Takeuchi, Haruka Ozaki, Satoshi Hiraoka, Yoichi Kamagata, Susumu Sakata, Hideyoshi Yoshioka, and Wataru Iwasaki.
  • Journal Title: PLOS ONE Volume: 14 Pages: e0213535
  • DOI: 10.1371/journal.pone.0213535
  • Peer Reviewed / Open Access
• [Journal Article] Molecular evidence for recent divergence of X- and Y-linked gene pairs in Spinacia oleracea L. (2019)
  • Author(s): Yosuke Okazaki, Satoshi Takahata, Hideki Hirakawa, Yutaka Suzuki, Yasuyuki Onodera,
  • Journal Title: PLOS ONE Volume: 14 Pages: e0214949
  • DOI: 10.1371/journal.pone.0214949
  • Peer Reviewed / Open Access
• [Journal Article] Five alternative Helicobacter pylori antibiotics to counter high levofloxacin and metronidazole resistance in the Dominican Republic. (2019)
  • Author(s): Miftahussurur M, Cruz M, Doohan D, Subsomwong P, Abreu JAJ, Hosking C, Waskito LA, Yamaoka Y.
  • Journal Title: PLoS One. Volume: 14 Issue: 3 Pages: e0213868
  • DOI: 10.1371/journal.pone.0213868
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] ES-mediated chimera analysis revealed requirement of DDX6 for NANOS2 localization and function in mouse germ cells (2019)
  • Author(s): Shimada R, Kiso M, Saga Y
  • Journal Title: Sci Rep. Volume: 9 Pages: 515
  • DOI: 10.1038/s41598-018-36502-0
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• [Journal Article] Direct analysis of incorporation of an anticancer drug into DNA at single-molecule resolution. (2019)
  • Author(s): Oshiro, T., Komoto, Y., Konno, M., Koseki, J., Asai, A., Ishii, H., Taniguchi, M.
  • Journal Title: Sci. Rep. Volume: 9 Pages: 3886
  • DOI: 10.1038/s41598-019-40504-x
  • Peer Reviewed / Open Access
• [Journal Article] Cold acclimation via the KQT-2 potassium channel is modulated by oxygen in Caenorhabditis elegans (2019)
  • Author(s): Okahata M., Wei A. D., Ohta A., Kuhara A.
  • Journal Title: Science Advances Volume: 5 Pages: eaav3631
  • DOI: 10.1126/sciadv.aav3631
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• [Journal Article] Prepatterning of Papilio xuthus caterpillar camouflage is controlled by three homeobox genes : clawless, abdominal-A, and Abdominal-B (2019)
  • Author(s): H. Jin, T. Seki, J. Yamaguchi and H. Fujiwara
  • Journal Title: Science Avances Volume: 5 Pages: eaav7569
  • DOI: 10.1126/sciadv.aav7569
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• [Journal Article] Local structural changes of the influenza A virus ribonucleoprotein complex by single mutations in the specific residues involved in efficient genome packaging. (2019)
  • Author(s): Takizawa N, Ogura Y, Fujita Y, Noda T, Shigematsu H, Hayashi T, Kurokawa K
  • Journal Title: Virology Volume: 531 Pages: 126-140
  • DOI: 10.1016/j.virol.2019.03.004
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• [Journal Article] CRISPR/Cas9-based heritable targeted mutagenesis in Thermobia domestica : A genetic tool in an apterygote development model of wing evolution (2018)
  • Author(s): Ohde, T., Takehana, Y., Shiotsuki, T. and Niimi T.
  • Journal Title: Arthropod Structure and Development Volume: 47 Pages: 362-369
  • DOI: 10.1016/j.asd.2018.06.003
  • Peer Reviewed
• [Journal Article] The role of Zhx2 transcription factor in bipolar cell differentiation during mouse retinal development. (2018)
  • Author(s): Kawamura, Y, Yamanaka, K, Poh, B, Kuribayashi, K, Koso, H, Watanabe, S
  • Journal Title: Biochem Biophys Res Commun Volume: 503 Pages: 3023-3030
  • DOI: 10.1016/j.bbrc.2018.08.088
  • Peer Reviewed
• [Journal Article] Unexpected role of the IMD pathway in Drosophila gut defense against Staphylococcus aureus (2018)
  • Author(s): Hori A, Kurata S, Kuraishi T
  • Journal Title: Biochemical and Biophysical Research Communications Volume: 495 Pages: 395-400
  • DOI: 10.1016/j.bbrc.2017.11.004
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• [Journal Article] Combining probabilistic alignments with read pair information improves accuracy of split-alignments (2018)
  • Author(s): Anish M S Shrestha, Naruki Yoshikawa, Kiyoshi Asai
  • Journal Title: Bioinformatics Volume: 34 Issue: 21 Pages: 3631-3637
  • DOI: 10.1093/bioinformatics/bty398
  • Peer Reviewed / Open Access
• [Journal Article] A framework and an algorithm to detect low-abundance DNA by a handy sequencer and a palm-sized computer (2018)
  • Author(s): Bansho Masutani, Shinichi Morishita
  • Journal Title: Bioinformatics Volume: 35 Pages: 584-592
  • DOI: 10.1093/bioinformatics/bty663
  • Peer Reviewed / Open Access
• [Journal Article] Convolutional neural networks for classification of alignments of non-coding RNA sequences (2018)
  • Author(s): Aoki, G. Sakakibara, Y.
  • Journal Title: Bioinformatics Volume: 34 Pages: i237-i244
  • DOI: 10.1093/bioinformatics/bty228
  • Peer Reviewed / Open Access
• [Journal Article] Data analytic study of the homothermal maintenance mechanism of Skunk Cabbage : Capturing pre-equilibrium characteristics using extended poisson model (2018)
  • Author(s): Kawasaki S, Ito K
  • Journal Title: Biophysics and Physicobiology Volume: 15 Pages: 235-250
  • DOI: 10.2142/biophysico.15.0_235
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• [Journal Article] Identification of a neuronal population in the telencephalon essential for fear conditioning in zebrafish (2018)
  • Author(s): Lal, P., Tanabe, H., Suster, M. L., Ailani, D., Kotani, Y., Muto, A., Itoh, M., Iwasaki, M., Wada, H., Yaksi, E., and Kawakami, K.
  • Journal Title: BMC Biology Volume: 16 Pages: 45
  • DOI: 10.1186/s12915-018-0502-y
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Common variant of BCAS3 is associated with gout risk in Japanese population : the first replication study after gout GWAS in Han Chinese. (2018)
  • Author(s): Sakiyama M, Matsuo H, Nakaoka H, Kawamura Y, Kawaguchi M, Higashino T, Nakayama A, Akashi A, Ueyama J, Kondo T, Wakai K, Sakurai Y, Yamamoto K, Ooyama H, Shinomiya N.
  • Journal Title: BMC Med Genet Volume: 19 Pages: 96
  • DOI: 10.1186/s12881-018-0583-z
  • Peer Reviewed / Open Access
• [Journal Article] Homeolog expression quantification methods for allopolyploids (2018)
  • Author(s): Tony C Y Kuo Masaomi Hatakeyama Toshiaki Tameshige Kentaro K Shimizu Jun Sese
  • Journal Title: Briefings in Bioinformatics Pages: bby121
  • DOI: 10.1093/bib/bby121
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] A convolutional neural network uses microscopic images to differentiate between mouse andhuman cell lines and their radioresistant clones. (2018)
  • Author(s): Toratani, M., Konno, M., Asai, A., Koseki, J., Kawamoto, K., Tamari, K., Li, Z., Sakai, D., Kudo, T., Satoh, T., Sato, K., Motooka, D., Okuzaki, D., Doki, Y., Mori, M., Ogawa, K., Ishii, H.
  • Journal Title: Cancer Res. Volume: 78 Pages: 6703-6707
  • DOI: 10.1158/0008-5472.CAN-18-0653
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• [Journal Article] The Chara Genome : Secondary Complexity and Implications for Plant Terrestrialization. (2018)
  • Author(s): Nishiyama T, Sakayama H, de Vries J, Buschmann H, Saint-Marcoux D, Ullrich KK, Haas FB, Vanderstraeten L, Becker D, Lang D, Vosolsobĕ S, Rombauts S, Wilhelmsson PKI, Janitza P, Kern R, Heyl A, Toyoda A, Suzuki Y, Kagoshima H, Schijlen E, Tajeshwar N, 他39名
  • Journal Title: Cell Volume: 174 Issue: 2 Pages: 448-464
  • DOI: 10.1016/j.cell.2018.06.033
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Roles of Nmnatl in the survival of retinal progenitors through the regulation of pro-apoptotic gene expression via histone acetylation (2018)
  • Author(s): Kuribayashi, H, Baba, Y, Iwagawa, T, Arai, E, Murakami, A, *Watanabe, S.
  • Journal Title: Cell Death and Diseases Volume: 9 Pages: 891
  • DOI: 10.1038/s41419-018-0907-0
  • Peer Reviewed
• [Journal Article] Screening for long noncoding RNAs associated with oral squamous cell carcinoma reveals the potentially oncogenic actions of DLEU1. (2018)
  • Author(s): Nishiyama K, Maruyama R, Niinuma T, Kai M, Kitajima H, Toyota M, Hatanaka Y, Igarashi T, Kobayashi JI, Ogi K, Dehari H, Miyazaki A, Yorozu A, Yamamoto E, Idogawa M, Sasaki Y, Sugai T, Tokino T, Hiratsuka H, Suzuki H.
  • Journal Title: Cell Death Dis Volume: 9 Pages: 826
  • DOI: 10.1038/s41419-018-0893-2
  • Peer Reviewed / Open Access
• [Journal Article] Polyamine Flux Suppresses Histone Lysine Demethylases and Enhances ID1 Expression in Cancer Stem Cells. (2018)
  • Author(s): Tamari, K., Konno, M., Asai, A., Koseki., Jun., Hayashi, K., Kawamoto, K., Murai, N., Matsufuji, S., Isohashi, F., Satoh, T., Goto, N., Tanaka, S., Doki, Y., Mori, M., Ogawa, K., Ishii, H.
  • Journal Title: Cell Death. Discovery Volume: 4 Pages: 104
  • DOI: 10.1038/s41420-018-0117-7
  • Peer Reviewed / Open Access
• [Journal Article] Clonal Expansion and Diversification of Cancer-Associated Mutations in Endometriosis and Normal Endometrium. (2018)
  • Author(s): Suda K, Nakaoka H, Yoshihara K, Ishiguro T, Tamura R, Mori Y, Yamawaki K, Adachi S, Takahashi T, Kase H, Tanaka K, Yamamoto T, Motoyama T, Inoue I, Enomoto T
  • Journal Title: Cell Reports Volume: 24 Pages: 1777-1789
  • DOI: 10.1016/j.celrep.2018.07.037
  • Peer Reviewed / Open Access
• [Journal Article] Bacteroides Vulgatus and Bacteroides dorei Reduce Gut Microbial Lipopolysaccharide Production and Inhibit Atherosclerosis (2018)
  • Author(s): Naofumi Yoshida, Takuo Emoto, Tomoya Yamashita, Hikaru Watanabe, Tomohiro Hayashi, Tokiko Tabata, Namiko Hoshi, Naoya Hatano, Genki Ozawa, Naoto Sasaki, Taiji Mizoguchi, Hilman Zulkifli Amin, Yushi Hirota, Wataru Ogawa, Takuji Yamada, Ken-ichi Hirata
  • Journal Title: Circulation Volume: 138 Pages: 2486-2498
  • DOI: 10.1161/CIRCULATIONAHA.118.033714
  • Peer Reviewed
• [Journal Article] Gut microbiome and plasma microbiome-related metabolites in patients with decompensated and compensated heart failure (2018)
  • Author(s): Tomohiro Hayashi, Tomoya Yamashita, Hikaru Watanabe, Kenjiro Kami, Naofumi Yoshida, Tokiko Tabata, Takuo Emoto, Naoto Sasaki, Taiji Mizoguchi, Yasuhiro Irino, Ryuji Toh, Masakazu Shinohara, Yuko Okada, Wataru Ogawa, Takuji Yamada, Ken-ichi Hirata
  • Journal Title: Circulation Journal Volume: 83 Pages: 182-192
  • DOI: 10.1253/circj.CJ-18-0468
  • Peer Reviewed
• [Journal Article] Alternative splicing of the Caenorhabditis elegans lev-11 tropomyosin gene is regulated in a tissue-specific manner (2018)
  • Author(s): Eichi Watabe, Shoichiro Ono and Hidehito Kuroyanagi.
  • Journal Title: Cytoskeleton Volume: 75 Pages: 427-436
  • DOI: 10.1002/cm.21489
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Kmt2b conveys monovalent and bivalent H3K4me3 in spermatogonia stem cells at germline and embryonic promoters (2018)
  • Author(s): Shin-ichi Tomizawa1, Yuki Kobayashi1, Takayuki Shirakawa1, Kumiko Watanabe1, Keita Mizoguchi1, Ikue Hoshi1, Kuniko Nakajima1, Jun Nakabayashi2, Sukhdeep Singh3, Andreas Dahl4, Dimitra Alexopoulou4, Masahide Seki5, Yutaka Suzuki5, and Kazuyuki Ohbol, 他4名
  • Journal Title: Development Volume: 145 Issue: 23 Pages: dev169102
  • DOI: 10.1242/dev.169102
  • Peer Reviewed / Int'l Joint Research
• [Journal Article] Induced cell fate transitions at multiple cell layers configure haustorium development in parasitic plants. (2018)
  • Author(s): Wakatake, T., Yoshida, S., Shirasu, K.
  • Journal Title: Development Volume: 145 Pages: dev1614848
  • DOI: 10.1242/dev.164848
  • Peer Reviewed / Open Access
• [Journal Article] Ubiquitination-independent repression of PRC1 targets during neuronal fate restriction in the developing mouse neocortex (2018)
  • Author(s): Masafumi Tsuboi#, Yusuke Kishi, #* Wakana Kyozuka, Haruhiko Koseki, Yusuke Hirabayashi, and Yukiko Gotoh* (#Co-first author, *Corespondence)
  • Journal Title: Developmental Cell Volume: 47 Pages: 758-772
  • DOI: 10.1016/j.devel.2018.11.018
  • Peer Reviewed
• [Journal Article] Anteroposterior Molecular Registries in Ectodermof the Echinus Rudiment (2018)
  • Author(s): Shinya Adachi, Iyo Niimi, Yui Sakai, Fuminori Sato, Takuya Minokawa, Makoto Urata, Atsuko Sehara-Fujisawa, Isao Kobayashi, and Masaaki Yamaguchi
  • Journal Title: DEVELOPMENTAL DYNAMICS Volume: 247 Pages: 1297-1307
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• [Journal Article] Transcriptome profiling reveals infection strategy of an insect maculavirus (2018)
  • Author(s): Katsuma S, Kawamoto M, Shoji K, Aizawa T, Kiuchi T, Izumi N, Ogawa M, Mashiko T, Kawasaki H, Sugano S, Tomari Y, Suzuki Y, Iwanaga M.
  • Journal Title: DNA Research Volume: 25 Pages: 277-286
  • DOI: 10.1093/dnares/dsx056
  • Peer Reviewed / Open Access
• [Journal Article] Genome-wide characterization of DNA methylation, small RNA expression, and hitone H3 lysine nine di-methylation in Brassica rapa L. (2018)
  • Author(s): Takahashi S, Osabe K, Fukushima N, Takuno S, Miyaji N, Shimizu M, Takasaki-Yasuda T, Suzuki Y, Dennie ES, Seki M, Fujimoto R
  • Journal Title: DNA Research Volume: 25 Pages: 511-520
  • DOI: 10.1093/dnares/dsy021
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Diminished nuclear RNA decay upon Salmonella infection upregulates antibacterial noncoding RNAs (2018)
  • Author(s): Katsutoshi Imamura, Akiko Takaya, Yo-ichi Ishida, Yayoi Fukuoka, Toshiki Taya, Ryo Nakaki, Miho Kakeda, Naoto Imamachi, Aiko Sato, Toshimichi Yamada, Rena Onoguchi-Mizutani, Gen Akizuki, Tanzina Tanu, Kazuyuki Tao, Sotaro Miyao, Yutaka Suzuki, Nobuyoshi Akimitsu, 他3名
  • Journal Title: EMBO J. Volume: 37 Pages: e97723
  • DOI: 10.15252/embj.201797723
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• [Journal Article] ADAR1-mediated RNA editing is required for thymic self-tolerance and inhibition of autoimmunity. (2018)
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  • Journal Title: EMBO Reports Volume: 19 Pages: e46303
  • DOI: 10.15252/embr.201846303
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• [Journal Article] Genomic Characterization of β-Glucuronidase-Positive Escherichia coli 0157 : H7 Producing Stx2a. (2018)
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  • Journal Title: Emerg Infect Dis. Volume: 24 Pages: 2219-2227
  • DOI: 10.3201/eid2412.180404
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• [Journal Article] Control of directionality of chromatin folding for the inter- and intra-domain contacts at the Tfap2c-Bmp7 locus. (2018)
  • Author(s): Taro Tsujimura, Osamu Takase, Masahiro Yoshikawa, Etsuko Sano, Matsuhiko Hayashi, Tsuyoshi Takato, Atsushi Toyoda, Hideyuki Okano, Keiichi Hishikawa
  • Journal Title: Epigenetics & Chromatin Volume: 11 Pages: 51
  • DOI: 10.1186/s13072-018-0221-1
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• [Journal Article] Current understanding and management of Helicobacter pylori infection : an updated appraisal. (2018)
  • Author(s): Ansari S, Yamaoka Y.
  • Journal Title: F1000Res. Volume: 7 Pages: F1000 Faculty Rev-721
  • DOI: 10.12688/f1000research.14149.1
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• [Journal Article] Bolidophyceae, a Sister Picoplanktonic Group of Diatoms-A Review (2018)
  • Author(s): 桑田 晃, 山田和正, 一宮睦雄, 吉川伸哉, Margot Tragin, Daniel Vaulot. Adriana Lopes dos Santos
  • Journal Title: Frontiers in Marine Science Volume: 5 Pages: 370
  • DOI: 10.3389/fmars.2018.00370
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Exogenous induction of thermogenesis in Arum concinnatum by salicylic acid (2018)
  • Author(s): Laina D, Oikonomou I, Koutroumpa K, Bariotakis M, Kotzabasis K, Ito K, Seymour RS, Pirintsos S
  • Journal Title: Functional Plant Biology Volume: 45 Pages: 1195-1204
  • DOI: 10.1071/FP17247
  • Peer Reviewed
• [Journal Article] A statistical method for observing personal diploid methylomes and transcriptomes with single-molecule real-time sequencing (2018)
  • Author(s): Yuta Suzuki, Yunhao Wang, Kin Au, Shinichi Morishita
  • Journal Title: Genes Volume: 9 Pages: E460
  • DOI: 10.3390/genes9090460
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• [Journal Article] Novel MXD4-NUTM1 fusion transcript identified in primary ovarian undifferentiated small round cell sarcoma. (2018)
  • Author(s): Tamura R, Nakaoka H, Yoshihara K, Mori Y, Yachida N, Nishikawa N, Motoyama T, Okuda S, Inoue I, Enomoto T
  • Journal Title: Genes Chromosomes Cancer Volume: 57 Pages: 557-563
  • DOI: 10.1002/gcc.22668
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• [Journal Article] Exploring the limits and causes of plastid genome expansion in volvocine green algae. (2018)
  • Author(s): Gaouda, H., Hamaji, T., Yamamoto, K., Kawai-Toyooka, H., Suzuki, M., Noguchi, H., Minakuchi, Y. Toyoda, A., Fujiyama, A., Nozaki, H. and Smith, D. R.
  • Journal Title: Genome Biol. Evol. Volume: 10 Pages: 2248-2254
  • DOI: 10.1093/gbe/evy175
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• [Journal Article] Characterizing <i>Helicobacter pylori cagA</i> in Myanmar. (2018)
  • Author(s): Myint T, Miftahussurur M, Vilaichone RK, Ni N, Aye TT, Subsomwong P, Uchida T, Mahachai V, Yamaoka Y.
  • Journal Title: Gut Liver Volume: 12 Issue: 1 Pages: 51-57
  • DOI: 10.5009/gn117053
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• [Journal Article] Pathogenesis of Helicobacter pylori infection. (2018)
  • Author(s): Waskito LA, Salama NR, Yamaoka Y.
  • Journal Title: Helicobacter. Volume: 23 Issue: Suppl 1 Pages: e12516
  • DOI: 10.1111/hel.12516
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• [Journal Article] Refining the clinical phenotype of Okur-Chung neurodevelopmental syndrome. (2018)
  • Author(s): Akahira-Azuma M, Tsurusaki Y, Enomoto Y, Mitsui J, Kurosawa K.
  • Journal Title: Hum Genome Var. Volume: 5 Pages: 18011
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• [Journal Article] Genetic populations and virulence factors of Helicobacter pylori. (2018)
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  • Journal Title: Infect Genet Evol. Volume: 60 Pages: 109-116
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• [Journal Article] Diffuse Gastric Cancer : A Summary of Analogous Contributing Factors for Its Molecular Pathogenicity. (2018)
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  • Journal Title: Int J Mol Sci. Volume: 19 Issue: 8 Pages: E2424
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• [Journal Article] The role of integrating conjugative elements in Helicobacter pylori : a review. (2018)
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  • Journal Title: J Biomed Sci. Volume: 25 Issue: 1 Pages: 86
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• [Journal Article] HIF2α in the uterine stroma permits embryo invasion and Iuminal epithelium detachment. (2018)
  • Author(s): Matsumoto L, Hirota Y, Saito-Fujita T, Takeda N, Tanaka T, Hiraoka T, Akaeda S, Fujita H, Shimizu-Hirota R, Igaue S, Matsuo M, Haraguchi H, Saito-Kanatani M, Fujii T, Osuga Y.
  • Journal Title: J Clin Invest Volume: 128 Pages: 3186-3197
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• [Journal Article] Surface microstructures are associated with mutational intratumoral heterogeneity in colorectal tumors (2018)
  • Author(s): Harada T., Yamamoto E., Yamano H. O., Aoki H., Matsushita H. O., Yoshikawa K., Takagi R., Harada E., Tanaka Y., Yoshida Y., Eizuka M., Yorozu A., Sudo G., Kitajima H., Niinuma T., Kai M., Sasaki Y., Tokino T., Sugai T., Nakase H., Suzuki H.
  • Journal Title: J Gastroenterol Volume: 53 Pages: 1241-1252
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  • Peer Reviewed / Open Access
• [Journal Article] Response to Letter to the Editor Regarding "Genetic Analysis of Ring Finger Protein 213(RNF213)c. 14576G>A in Intracranial Atherosclerosis of the Anterior and Posterior Circulations". (2018)
  • Author(s): Miyawaki S, Shinya Y, Imai H, Hongo H, Ono H, Takenobu A, Nakatomi H, Teraoka A, Saito N.
  • Journal Title: J Stroke Cerebrovasc Dis. Volume: 27 Pages: 2894-2895
  • DOI: 10.1016/j.jstrokecerebrovasdis.2018.07.009
  • Peer Reviewed
• [Journal Article] 3D genomic architecture reveals that neocentromeres associate with heterochromatin regions. (2018)
  • Author(s): Nishimura, K., Komiya, M., Hori, T., Itoh, T, Fukagawa, T
  • Journal Title: J. Cell Biol. Volume: 218 Pages: 134-149
  • DOI: 10.1083/jcb.201805003
  • Peer Reviewed
• [Journal Article] High-quality overlapping paired-end reads for the detection of A-to-I editing on small RNA. (2018)
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• [Journal Article] Multi-step genomic dissection of a suspected intra-hospital Helicobacter cinaedi outbreak (2018)
  • Author(s): Yasuhiro Gotoh, Takako Taniguchi, Dai Yoshimura, Keisuke Katsura Yuji Saeki, Yasutoshi Hirabara, Mayumi Fukuda, Ichiro Takajo, Junko Tomida, Yoshiaki Kawamura, Yoshitoshi Ogura, Takehiko Itoh, Naoaki Misawa, Akihiko Okayama6, and Tetsuya Hayashi
  • Journal Title: Microbial Genomics Volume: 4 Issue: 12
  • DOI: 10.1099/mgen.0.000236
  • Peer Reviewed / Open Access
• [Journal Article] A Single Pheromone Receptor Gene Conserved across 400 My of Vertebrate Evolution. (2018)
  • Author(s): Suzuki H, Nishida H, Kondo H, Yoda R, Iwata T, Nakayama K, Enomoto T, Wu J, Moriya-Ito K, Miyazaki M, Wakabayashi Y, Kishida T, Okabe M, Suzuki Y, Ito T, Hirota J, Nikaido M
  • Journal Title: Mol Biol Evol. Volume: 35 Issue: 12 Pages: 2928-2939
  • DOI: 10.1093/molbev/msy186
  • Peer Reviewed
• [Journal Article] Retained plsticity and substantial recovery of rod-mediated visual acuity at the visual cortex in blind adult mice with retinal dystrophy (2018)
  • Author(s): Nishiguchi KM, Fujita K, Tokashiki N, Komamura H, Takemoto-Kimura S, Okuno H, Bito H, Nakazawa T.
  • Journal Title: Mol Ther Volume: 26 Pages: 2397-2406
  • DOI: 10.1016/j.ymthe.2018.07.012
  • Peer Reviewed
• [Journal Article] MitoFish and MiFish pipeline : a mitochondrial genome database of fish with an analysis pipeline for environmental DNA metabarcoding. (2018)
  • Author(s): Yukuto Sato, Masaki Miya, Tsukasa Fukunaga, Tetsuya Sado, and Wataru Iwasaki.
  • Journal Title: Molecular Biology and Evolution Volume: 35 Pages: 1553-1555
  • DOI: 10.1093/molbev/msy074
  • Peer Reviewed / Open Access
• [Journal Article] Functional domains of NEATI architectural lncRNA induce paraspeckle assembly through phase separation (2018)
  • Author(s): Tomohiro Yamazaki, Sylvie Souquere, Takeshi Chujo, Simon Kobelke, Yee Seng Chong, Archa H, Fox, Charles S, Bond, Shinichi Nakagawa, Gerard Pierron, Tetsuro Hirose
  • Journal Title: Molecular Cell Volume: 70 Pages: 1038-1053
  • DOI: 10.1016/j.molcel.2018.05.019
  • Peer Reviewed / Int'l Joint Research
• [Journal Article] Lanthanide-Dependent Regulation of Methylotrophy in Methylobacteriumaquaticum Strain 22A. (2018)
  • Author(s): Masuda S, Suzuki Y, Fujitani Y, Mitsui R, Nakagawa T, Shintani M, Tani A.
  • Journal Title: mSphere Volume: 3 Issue: 1 Pages: e00462-17
  • DOI: 10.1128/mSphere.00462-17
  • Peer Reviewed / Open Access
• [Journal Article] Pulmonary Regnase-1 orchestrates the interplay of epithelium and adaptive immune systems to protect against pneumonia. (2018)
  • Author(s): Nakatsuka, Y., Vandenbon, A., Mino, T., Yoshinaga, M., Uehata, T., Cui, X., Sato, A., Tsujimura, T., Suzuki, Y., Sato, A., Handa, T., Chin, K., Sawa, T., Hirai, T., Takeuchi, O.
  • Journal Title: Mucosal Immunology Volume: 11 Pages: 1203-1218
  • DOI: 10.1038/s41385-018-0024-5
  • Peer Reviewed
• [Journal Article] Transcription factor DUOI generated by neo-functionalization is associated with evolution of sperm differentiation in plants. (2018)
  • Author(s): Higo A, Kawashima T, Borg M, Zhao M, López-Vidriero I, Sakayama H, Montgomery SA, Sekimoto H, Hackenberg D, Shimamura M, Nishiyama T, Sakakibara K, Tomita Y, Togawa T, Kunimoto K, Osakabe A, Suzuki Y, Yamato KT, Twell D, Berger F, Araki T, 他4名
  • Journal Title: Nat Commun. Volume: 9 Issue: 1 Pages: 5283
  • DOI: 10.1038/s41467-018-07728-3
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Ligand-receptor co-evolution shaped the jasmonate pathway in land plants. (2018)
  • Author(s): Monte, I., Ishida, S., Zamarreno, A. M., Hamberg, M., Franco-Zorrilla, J. M., Garcia-Casado, G., Gouhier-Darimont, C., Reymond, P., Takahashi, K., Garcia-Mina, J. M., Nishihama, R., Kohchi, T., and Solano, R.
  • Journal Title: Nat. Chem. Biol. Volume: 14 Pages: 480-488
  • DOI: 10.1038/s41589-018-0033-4
  • Peer Reviewed / Int'l Joint Research
• [Journal Article] Layer-specific morphological and molecular differences in neocortical astrocytes and their dependence on neuronal layers (2018)
  • Author(s): Darin Lanjakornsiripan, Baek-Jun Pior, Daichi Kawaguchi, Shohei Furutachi, Tomoaki Tahara, Yu Katsuyama, Yutaka Suzuki, Yugo Fukazawa & Yukiko Gotoh
  • Journal Title: Nature Communications Volume: 91 Pages: 1623
  • DOI: 10.1038/s41467-018-03940-3
  • Peer Reviewed / Open Access
• [Journal Article] Repeated inversions within a pannier intron drive diversification of intraspecific colour patterns of ladybird beetles. (2018)
  • Author(s): Toshiya Ando, Takeshi Matsuda, Kumiko Goto, Kimiko Hara, Akinori Ito, Junya Hirata, Joichiro Yatomi, Rei Kajitani, Miki Okuno, Yohei Minakuchi, Masahide Seki, Yutaka Suzuki, Kentaro Yano, Takehiko Itoh, Shuji Shigenobu, Atsushi Toyoda, and Teruyuki Niimi, 他3名
  • Journal Title: Nature Communications Volume: 9 Pages: 3843
  • DOI: 10.1038/s41467-018-06116-1
  • Peer Reviewed / Open Access
• [Journal Article] Host lignin composition affects haustorium induction in the parasitic plants Phtheirospermum japonicum and Striga hermonthica. (2018)
  • Author(s): Cui S, Wada S, Tobimatsu Y, Takeda Y, Saucet SB, Takano T, Umezawa T, Shirasu K, Yoshida S.
  • Journal Title: New Phytol. Volume: 218 Pages: 710-723
  • DOI: 10.1111/nph.15033
  • Peer Reviewed / Open Access
• [Journal Article] LGP2 virus sensor regulates gene expression network mediated by TRBP-bound microRNAs. (2018)
  • Author(s): Takahashi T, Nakano Y, Onomoto K, Murakami F, Komori C, Suzuki Y, Yoneyama M, Ui-Tei.
  • Journal Title: Nucleic Acids Res. Volume: 46 Pages: 9134-9147
  • DOI: 10.1093/nar/gky575
  • Peer Reviewed / Open Access
• [Journal Article] Poly(ethylene glycol)-poly(lysine) block copolymer-ubenimex conjugate targets aminopeptidase N and exerts an antitumor effect in hepatocellular carcinoma stem cells. (2018)
  • Author(s): Toshiyama, R., Konno, M., Eguchi, H., Takemoto, H., Noda, T., Asai, A., Koseki, J., Haraguchi, N., Ueda, Y. Matsushita, K., Asukai, K., Ohashi, T., Iwagami, Y., Yamada, D., Sakai, D., Asaoka, T., Satoh, T., Doki, Y., Nishiyama, N., Mori, M., Ishii, H., 他4名
  • Journal Title: Oncogene Volume: 38 Pages: 244-260
  • DOI: 10.1038/s41388-018-0406-x
  • Peer Reviewed / Open Access
• [Journal Article] Mutational analysis of uterine cervical cancer that survived multiple rounds of radiotherapy. (2018)
  • Author(s): Nuryadi E, et al
  • Journal Title: Oncotarget Volume: 9 Pages: 32642-32652
  • DOI: 10.18632/oncotarget.25982
  • Peer Reviewed / Open Access
• [Journal Article] Target amplicon exome-sequencing identifies promising diagnosis and prognostic markers involved in RTK-RAS and PI3K-AKT signaling as central oncopathways in primary central nervous system lymphoma (2018)
  • Author(s): Takashima Y., Sasaki Y., Hayano A., Homma J., Fukai J., Iwadate Y., Kajiwara K., Ishizawa S., Hondoh H., Tokino T., Yamanaka R.
  • Journal Title: Oncotarget Volume: 9 Pages: 27471-27486
  • DOI: 10.18632/oncotarget.25463
  • Peer Reviewed / Open Access
• [Journal Article] Epigenetic silencing of miR-200b is associated with cisplatin resistance in bladder cancer. (2018)
  • Author(s): Shindo T, Niinuma T, Nishiyama N, Shinkai N, Kitajima H, Kai M, Maruyama R, Tokino T, Masumori N, Suzuki H.
  • Journal Title: Oncotarget Volume: 9 Pages: 24457-24469
  • DOI: 10.18632/oncotarget.25326
  • Peer Reviewed / Open Access
• [Journal Article] Molecular dissection of nuclear paraspeckles : towards understanding the emerging world of the RNP milieu (2018)
  • Author(s): Shinichi Nakagawa, Tomohiro Yamazaki, Tetsuro Hirose
  • Journal Title: Open Biology Volume: 8 Pages: 180150
  • DOI: 10.1098/rsob.180150
  • Peer Reviewed / Open Access
• [Journal Article] Effective methods for practical application of gene expression analysis in field-grown rice roots (2018)
  • Author(s): Matsunami, M., Hayashi, H., Tominaga, Y., Nagamura, Y., Murai-Hatano, M., Ishikawa-Sakurai, J., and Kuwagata, T.
  • Journal Title: Plant and Soil Volume: 433 Pages: 173-187
  • DOI: 10.1007/s11104-018-3834-z
  • Peer Reviewed
• [Journal Article] Latent environmental allocation of microbial community data. (2018)
  • Author(s): Higashi K, Suzuki S, Kurosawa S, Mori H, Kurokawa K
  • Journal Title: PLoS Comp. Biol. Volume: 14 Issue: 6 Pages: e1006143
  • DOI: 10.1371/journal.pcbi.1006143
  • Peer Reviewed / Open Access
• [Journal Article] Genomic landscape at a late stage of stickleback speciation : high genomic divergence interspersed by small localized regions of introgression. (2018)
  • Author(s): Ravinet, M., Yoshida, K., Shigenobu, S., Toyoda, A., Fujiyama, A., and Kitano, J.
  • Journal Title: PLoS Genetics Volume: 14 Issue: 5 Pages: e1007358
  • DOI: 10.1371/journal.pgen.1007358
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Prevalence of Helicobacter pylori and its CagA subtypes in gastric cancer and duodenal ulcer at an Austrian tertiary referral center over 25 years. (2018)
  • Author(s): Kamogawa-Schifter Y, Yamaoka Y, Uchida T, Beer A, Tribl B, Schöniger-Hekele M, Trauner M, Dolakw.
  • Journal Title: PLoS One. Volume: 13 Issue: 5 Pages: e0197695
  • DOI: 10.1371/journal.pone.0197695
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Endoribonuclease ENDU-2 regulates multiple traits including cold tolerance via cell autonomous and nonautonomous controls in C. elegans (2018)
  • Author(s): Ujisawa T., Ohta A., Ii T., Minakuchi Y., Toyoda A., Ii M., Kuhara A.
  • Journal Title: Proc Natl Acad Sci U S A Volume: 115 Pages: 8823-8828
  • DOI: 10.1073/pnas.1808634115
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] p53-inducible DPYSL4 associates with mitochondrial supercomplexes and regulates energy metabolism in adipocytes and cancer cells. (2018)
  • Author(s): Nagano H, Hashimoto N, Nakayama A, Suzuki S, Miyabayashi Y, Yamato A, Higuchi S, Fujimoto M, Sakuma I, Beppu M, Yokoyama M, Suzuki Y, Sugano S, Ikeda K, Tatsuno I, Manabe I, Yokote K, Inoue S, Tanaka T
  • Journal Title: Proc Natl Acad Sci U S A Volume: 115 Issue: 33 Pages: 8370-8375
  • DOI: 10.1073/pnas.1804243115
  • Peer Reviewed / Open Access
• [Journal Article] Semaphorin signaling via MICAL3 induces symmetric cell division to expand breast cancer stem-like cells. (2018)
  • Author(s): Tominaga, K., Minato, H., Murayama, T., Sasahara, A., Nishimura, T., Kiyokawa, E., Kanauchi, H., Shimizu, S., Sato, A., Nishioka, K., Tsuji, E., Yano, M., Ogawa, T., Ishii, H., Mori, M., Akashi, K., Okamoto, K., Tanabe, M., Tada, K., Tojo, A., Gotoh, N.
  • Journal Title: Proc. Natl. Acad. Sci. U. S. A. Volume: 116 Pages: 625-630
  • DOI: 10.1073/pnas.1806851116
  • Peer Reviewed / Open Access
• [Journal Article] Base-pairing probability in the microRNA stem region affects the binding and editing specificity of human A-to-I editing enzyme ADAR1-p110 and ADAR2. (2018)
  • Author(s): Ishiguro S, Galipon J, Ishii R, Suzuki Y, Kondo S, Okada-Hatakeyama M, Tomita M, Ui-Tei K.
  • Journal Title: RNA Biology Volume: 15 Pages: 976-989
  • DOI: 10.1080/15476286.2018.1486658
  • Peer Reviewed / Open Access
• [Journal Article] Genome-wide analysis revealed that DZNep reduces tubulointerstitial fibrosis via down-regulation of pro-fibrotic genes. (2018)
  • Author(s): Mimura I, Hirakawa Y, Kanki Y, Nakaki R, Suzuki Y, Tanaka T, Aburatani H, Nangaku M.
  • Journal Title: Sci Rep Volume: 8 Issue: 1 Pages: 3779
  • DOI: 10.1038/s41598-018-22180-5
  • Peer Reviewed / Open Access
• [Journal Article] Time-Series Analysis of Tumorigenesis in a Murine Skin Carcinogenesis Model (2018)
  • Author(s): Aoto Y, Okumura K, Hachiya T, Hase S, Wakabayashi Y, Ishikawa F, Sakakibara Y.
  • Journal Title: Sci Rep Volume: 8 Pages: 12994
  • DOI: 10.1038/s41598-018-31349-x
  • Peer Reviewed / Open Access
• [Journal Article] Distribution and clinical associations of integrating conjugative elements and cag pathogenicity islands of Helicobacter pylori in Indonesia. (2018)
  • Author(s): Waskito LA, Miftahussurur M, Lusida MI, Syam AF, Suzuki R, Subsomwong P, Uchida T, Hamdan M, Nasronudin, Yamaoka Y.
  • Journal Title: Sci Rep. Volume: 8 Issue: 1 Pages: 6073
  • DOI: 10.1038/s41598-018-24406-y
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Naturally occurring a loss of a giant plasmid from Mycobacterium ulcerans subsp. shinshuense makes it non-pathogenic. (2018)
  • Author(s): Nakanaga K, Ogura Y, Toyoda A, Yoshida M, Fukano H, Fujiwara N, Miyamoto Y, Nakata N, Kazumi Y, Maeda S, Ooka T, Goto M, Tanigawa K, Mitarai S, Suzuki K, Ishii N, Ato M, Hayashi T, Hoshino Y.
  • Journal Title: Sci Rep. Volume: 8 Issue: 1 Pages: 8218
  • DOI: 10.1038/s41598-018-26425-1
  • Peer Reviewed / Open Access
• [Journal Article] The prehistoric peopling of Southeast Asia (2018)
  • Author(s): Hugh McColl, Fernando Racimo, Lasse Vinner, Fabrice Demeter, Takashi Gakuhari, J. Victor Moreno-Mayar, George van Driem, Uffe Gram Wilken, Andaine Seguin-Orlando, Constanza de la Fuente Castro, Sally Wasef, Rasmi Shoocongdej, Viengkeo Souksavatdy, 他53名
  • Journal Title: Science Volume: 361 Pages: 88-92
  • DOI: 10.1126/science.aat3628
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Epidemiology of Helicobacter pylori and CagA-Positive Infections and Global Variations in Gastric Cancer. (2018)
  • Author(s): Park JY, Forman D, Waskito LA, Yamaoka Y, Crabtree JE.
  • Journal Title: Toxins (Base1) Volume: 10 Issue: 4 Pages: E163
  • DOI: 10.3390/toxins10040163
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Targeted next-generation sequencing of 50 cancer-related genes in Japanese patients with oral squamous cell carcinoma (2018)
  • Author(s): Nakagaki T., Tamura M., Kobashi K., Omori A., Koyama R., Idogawa M., Ogi K., Hiratsuka H., Tokino T., Sasaki Y.
  • Journal Title: Tumour Biol Volume: 40 Pages: 1010428318800180
  • DOI: 10.1177/1010428318800180
  • Peer Reviewed / Open Access
• [Journal Article] Contributions of regulated transcription and mRNA decay to the dynamics of gene expression. (2018)
  • Author(s): Yamada T. and Akimitsu N.
  • Journal Title: Wiley Interdiscip Rev RNA Volume: 10 Pages: e1508
  • DOI: 10.1002/wrna.1508
  • Peer Reviewed / Open Access
• [Journal Article] Molecular characterization of eye pigmentation-related ABC transporter genes in the ladybird beetle Harmonia axyridis reveals striking gene duplication of the white gene. (2018)
  • Author(s): Tsuji, T., Gotoh, H., Morita, S. Hirata, J., Minakuchi, Y., Yaginuma, T., Toyoda, A. and Niimi, T.
  • Journal Title: Zool. Sci. Volume: 35 Pages: 260-267
  • DOI: 10.2108/zs170166
  • Peer Reviewed
• [Journal Article] Tissue network underlying cold tolerance (2018)
  • Author(s): Mayu Fujita, Kohei Ohnishi, Akane Ohta, Atsushi Kuhara
  • Journal Title: 細胞 Volume: 50 Pages: 8-11
  • Peer Reviewed
• [Journal Article] ネギ萎凋病の抵抗性に関与する遺伝子群の特定に成功 -近縁種シャロットがもつ抵抗性をネギに導入することで国内初の抗性品種育成を目指す- (2018)
  • Author(s): 執行正義
  • Journal Title: 農耕と園芸 Volume: 7 Pages: 16-20
• [Presentation] Role of Arc for recent and remote memory (2019)
  • Author(s): Okuno H
  • Organizer: 2019 WCNP Meeting
  • Int'l Joint Research / Invited
• [Presentation] 'Life Science Alliance Journal Lecture' REGULATION OF NEOCORTICAL NEURAL STEM/PROGENITOR CELL FATE DURING DEVELOPMENT (2019)
  • Author(s): Yukiko Gotoh
  • Organizer: 2nd Neurogenesis Conference
  • Int'l Joint Research / Invited
• [Presentation] The neuronal circuitry for prey capture in zebrafish : from visual stimuli to the hypothalamic feeding center (2019)
  • Author(s): Koichi Kawakami
  • Organizer: 9th Federation of the Asian and Oceanian Physiological Societies Congress
  • Int'l Joint Research / Invited
• [Presentation] Trials of targeted gene disruption of the plant mitochondrial genomes by mitoTALEN. (2019)
  • Author(s): 有村慎一
  • Organizer: Gordon Research Conference, Chloroplast Biotechnology
  • Int'l Joint Research / Invited
• [Presentation] TARGETED DISRUPTION OF MITOCHONDRIAL GENES ASSOCIATED WITH CYTOPLASMIC MALE STERILITY IN RICE AND RAPESEED (2019)
  • Author(s): 有村慎一
  • Organizer: International conference of Plant mitochondria
  • Int'l Joint Research / Invited
• [Presentation] From the era Aristotle to modern science : How animals can tell the season (2019)
  • Author(s): Masayuki Iigo
  • Organizer: International Workshop on Bioimaging (IWBI2019)
  • Int'l Joint Research / Invited
• [Presentation] Physiological effects of Arabidopsis deadenylases, AtCCR4a/b, components of the AtCCR4-NOT complex. (2019)
  • Author(s): 千葉由佳子
  • Organizer: Post-transcriptional gene regulation in plants
  • Int'l Joint Research / Invited
• [Presentation] Quality control of protein synthesis by peptidy1-tRNA drop off in the early elongation stage (2019)
  • Author(s): Tsutomu Suzuki
  • Organizer: Ribosome Structure and Function 2019
  • Int'l Joint Research / Invited
• [Presentation] Dynamic regulation of RNA modification in health and disease (2019)
  • Author(s): Tsutomu Suzuki
  • Organizer: RNA Editing, Next-Generation Epitranscriptomics in Health and Disease (Gordon Research Conference)
  • Int'l Joint Research / Invited
• [Presentation] RNA modification, a chemical diversity for biological function (2019)
  • Author(s): Tsutomu Suzuki
  • Organizer: The 20th Takeda Science Foundation Symposium on Bioscience “RNA Neobiology”
  • Int'l Joint Research / Invited
• [Presentation] Helicobacter pylori virulence and gastric cancer pathogenesis : current knoeledge. (2019)
  • Author(s): Yoshio Yamaoka
  • Organizer: The 27th Annual Meeting of the Korean College of Helicobacter and Upper Gastrointestinal Research and the 16th Japan-Korea Joint Symposium on Helicobacter Research
  • Int'l Joint Research / Invited
• [Presentation] A potential biomarker panel to distinguish gastric cancer from duodenal ulcer : results from GWAS in East Asian-type Helicobacter pylori. (2019)
  • Author(s): Vo Phuoc Tuan, Kouji Yahara, Yoshio Yamaoka
  • Organizer: The 27th Annual Meeting of the Korean College of Helicobacter and Upper Gastrointestinal Research and the 16th Japan-Korea Joint Symposium on Helicobacter Research
  • Int'l Joint Research / Invited
• [Presentation] Nutritional regulation of C. elegans development (2019)
  • Author(s): Masamitsu Fukuyama and Toshiaki Katada
  • Organizer: The 9th Federation of the Asian and Oceanian Physiological Society Congress
  • Int'l Joint Research / Invited
• [Presentation] Dynamic regulation of RNA modification in health and disease (2019)
  • Author(s): Tsutomu Suzuki
  • Organizer: Translation Machinery in Health and Disease (Gordon Research Conference)
  • Int'l Joint Research / Invited
• [Presentation] Gastritis : Past, current and future treatment. (2019)
  • Author(s): Yoshio Yamaoka
  • Organizer: World Class Professor Program, Surabaya, Indonesia
  • Int'l Joint Research / Invited
• [Presentation] Toward repositioning Allium vegetable crops as global commodities : Opportunities and challenges for future application of omics and phytomedomics platforms to crop improvement (2019)
  • Author(s): Masayoshi Shigyo
  • Organizer: XXX. INTERNATIONAL HORTICULTURAL CONGRESS
  • Int'l Joint Research / Invited
• [Presentation] Gene expression analyses of pituitary and renal tissues in pufferfish acclimated to brackish water and seawater. (2019)
  • Author(s): Keiichiro Fujimori, Gaku Mizutani, Yutaka Suzuki, Akira Kato
  • Organizer: 「先進ゲノム支援」国際シンポジウム -Frontiers of Genome Science-
  • Int'l Joint Research
• [Presentation] Sleeping beauty tranposon insertional mutagenesis screen of uerine leiomyosarcoma idetified cancer genes driving sarcomagenesis (2019)
  • Author(s): Michiko Kodama
  • Organizer: 11th AACR-JCA joint conference on breakthroughs in cancer research
  • Int'l Joint Research
• [Presentation] Amplicon-based targeted sequencing identifies promising markers in oral squamous cell carcinoma from Japanese patients. (2019)
  • Author(s): Takashi Tokino, Takafumi Nakagaki, Masashi Idogawa, Yasushi Sasaki.
  • Organizer: 11th AACR-JCA Joint International Conference
  • Int'l Joint Research
• [Presentation] The novel p53 family target BRMS1L suppresses cancer cell invasion and migration (2019)
  • Author(s): Sasaki Y, Koyama R, Maruyama R, Tamura M, Idogawa M, Suzuki H, Tokino T
  • Organizer: 11th AACR-JCA Joint International Conference
  • Int'l Joint Research
• [Presentation] DOT1L inhibition blocks multiple myeloma cell proliferation by suppressing IRF4-MYC signaling. (2019)
  • Author(s): Ishiguro K, Kitajima H, Niinuma T, Ishida T, Maruyama R, Ikeda H, Yamamoto E, Kai M, Sasaki Y, Tokino T, Nakase H, Suzuki H.
  • Organizer: 11th AACR-JCA Joint International Conference
  • Int'l Joint Research
• [Presentation] Epigenetic regulation of miR-200b is associated with cisplatin resistance in bladder cancer. (2019)
  • Author(s): Shindo T, Niinuma T, Kitajima H, Kai M, Tokino T, Masumori N, Suzuki H.
  • Organizer: 11th AACR-JCA Joint International Conference
  • Int'l Joint Research
• [Presentation] Diversified transcriptional regulation of secondary metabolic gene clusters in closely related Aspergillus species. (2019)
  • Author(s): Takahashi H, Umemura M, Ninomiya A, Shimizu M, Kusuya Y, Urayama S, Watanabe A, Kamei K, Yaguchi T, Hagiwara D.
  • Organizer: 30th Fungal Genetics Conference
  • Int'l Joint Research
• [Presentation] BRMSIL, a metastatic suppressor gene is transcriptionally regulated by p53. (2019)
  • Author(s): Takashi Tokino, Ryota Koyama, Masashi Idogawa, Yasushi Sasaki.
  • Organizer: American Association of Cancer Research (AACR) Annual Meeting 2019
  • Int'l Joint Research
• [Presentation] Targeted exome sequencing profiles genetic alterations in oral squamous cell carcinoma from Japanese patients. (2019)
  • Author(s): Sasaki Y, Nakagaki T, Tamura M, Fukushima F, Ikeda H, Koyama R, Idogawa M, Tokino T
  • Organizer: American Association of Cancer Research (AACR) annual meeting 2019
  • Int'l Joint Research
• [Presentation] VITCOMIC2 and MicrobeDB. jp : Analyzing and comparing microbial community sequencing data (2019)
  • Author(s): Mori H, Kurokawa K.
  • Organizer: Frontiers of Genome Science 2019
  • Int'l Joint Research
• [Presentation] ADAR1-mediated RNA editing is required for thymic self-tolerance and inhibition of autoimmunity (2019)
  • Author(s): Nakahama Taisuke
  • Organizer: Gordon Research Seminar for RNA editing(イタリア)
  • Int'l Joint Research
• [Presentation] Effects of Space Stay on Skeletal Muscle (2019)
  • Author(s): Atsuko Sehara
  • Organizer: International Symposium on LIVING IN SPACE 2019 From basic biology to the MOON, MARS and beyond
  • Int'l Joint Research
• [Presentation] The identification of KLF5 enhancer region in colorectal cancer (2019)
  • Author(s): Yuhki Yokoyama, Takashi Takeda, Kumi Kitagawa, Daisuke Okuzaki, Toshitsugu Fujita, Hodaka Fujii, Hirofumi Yamamoto
  • Organizer: KEYSTONE SYMPOSIA 3D Genome : Gene Regulation and Disease
  • Int'l Joint Research
• [Presentation] MCM10 maintains breast cancer stem-like cells through encouraging rapid response to DNA replication stress (2019)
  • Author(s): 村山貴彦
  • Organizer: Keystone symposia DNA replication and genome instability : From mechanisms to disease
  • Int'l Joint Research
• [Presentation] The nutritional basis of Drosophila associated microbes for larval growth (2019)
  • Author(s): 牟禮あゆみ
  • Organizer: Kyoto University the 17th International Student Seminar
  • Int'l Joint Research
• [Presentation] Database for the Chromosome-Level Assembly for a Liverwort Marchantia polymorpha (2019)
  • Author(s): Nakamura, Y., Tanizawa, Y., Mochizuki, T., et al.
  • Organizer: Plant and Animal Genomics 2019
  • Int'l Joint Research
• [Presentation] Draft Genome Sequence of Bitter Gourd (Momordica charantia) as Vegetable Crop and Medicinal Plant (2019)
  • Author(s): Hideo Matsumura
  • Organizer: Plant&Animal Genome XXVII
  • Int'l Joint Research
• [Presentation] Mutational Profiling of Japanese Cervical Cancer Patients Treated with Radiotherapy (2019)
  • Author(s): Yuya Yoshimoto, Takahiro Oike, Yasushi Sasaki, Endang Nuryadi, Kazutoshi Murata, Takuya Kaminuma, Daisuke Irie, Daijiro Kobayashi, Tatsuya Ohno, Takashi Tokino, Takashi Nakano
  • Organizer: The 9th Annual Meeting of The International Society of Radiation Neurobiology
  • Int'l Joint Research
• [Presentation] The evolution of mating type locus-like regions in the homothallic species Volvox africanus (2019)
  • Author(s): Yamamoto, K., Hamaji, T., Kawai-Toyooka, H., Noguchi, H., Minakuchi, Y., Toyoda, A., and Nozaki, H.
  • Organizer: The International symposium organized by “Platform for Advanced Genome Science” -FRONTIERS OF GENOME SCIENCE-
  • Int'l Joint Research
• [Presentation] Patient-specific circulating tumor DNA monitoring using esophageal squamous cell cancer gene panel and digital PCR (2019)
  • Author(s): Takeshi Iwaya, Fumitaka Endo, Yasushi Sasaki, Noriyuki Sasaki, Mizunori Yaegashi, Yuji Akiyama, Akira Sasaki, Mari Masuda, Tesshi Yamada, Takashi Tokino, Satoshi Nishizuka
  • Organizer: アメリカ癌学会
  • Int'l Joint Research
• [Presentation] Marker development for resistance of strawberry against Colletotrichum gloeosporioides. (2019)
  • Author(s): 金相完
  • Organizer: 先進ゲノム国際シンポジウム
  • Int'l Joint Research
• [Presentation] 病原真菌アスペルギルスフミガタスの表現型解析および遺伝型解析 (2019)
  • Author(s): 高橋弘喜
  • Organizer: 第2回感染症診断と治療におけるゲノム解析
  • Invited
• [Presentation] 自然免疫応答を制御する長鎖 ノンコーディングRNA に関する研究 (2019)
  • Author(s): 秋光信佳
  • Organizer: 先端モデル動物支援プラットフォーム
  • Invited
• [Presentation] 放射線によるがん細胞の免疫応答 (2019)
  • Author(s): 影山 俊一郎
  • Organizer: 第78回癌学会学術総会
  • Invited
• [Presentation] in vivo実験的進化系を利用した細菌の病原性システムの解明 (2019)
  • Author(s): 垣内 力
  • Organizer: 第92回日本細菌学会総会
  • Invited
• [Presentation] キセキツイ動物モデルと蛋白質の機能 (2019)
  • Author(s): 大森義裕
  • Organizer: 蛋白質研究所コロキウム
  • Invited
• [Presentation] 内生糸状菌との相互作用を介したアブラナ科植物の生存戦略 (2019)
  • Author(s): 晝間敬
  • Organizer: 日本農芸学会
  • Invited
• [Presentation] 長鎖ノンコーディングRNAによるストレス応答制御 (2019)
  • Author(s): 秋光信佳
  • Organizer: 北陸RNAクラブ
  • Invited
• [Presentation] 健康に暮らす社会に向けた宇宙の活用 -基礎研究や民間の取組み (2019)
  • Author(s): 瀬原淳子
  • Organizer: 国際宇宙ステーション「きぼう」利用シンポジウム
  • Invited
• [Presentation] 病原真菌Aspergillus fumigatusの環境応答能の解析 (2019)
  • Author(s): 髙橋弘喜
  • Organizer: 第101回日本細菌学会関東支部総会
  • Invited
• [Presentation] 10 Simple Reasons Why Graph Genome is Needed (2019)
  • Author(s): 笠原 雅弘
  • Organizer: 第10回Genome Graph研究会
  • Invited
• [Presentation] 腸内細菌叢と循環器疾患～性差からの考察を加えて～ (2019)
  • Author(s): 山下 智也、平田 健一
  • Organizer: 第12回日本性差医学・医療学会学術集会
  • Invited
• [Presentation] データ駆動アプローチによるゲノム微生物学の拡張 (2019)
  • Author(s): 岩崎渉
  • Organizer: 第13回日本ゲノム微生物学会年会
  • Invited
• [Presentation] 地球規模海洋オミクスデータに基づく巨大ウイルスと生物炭素ポンプの関係の解明 (2019)
  • Author(s): 緒方博之
  • Organizer: 第2回感染症診断と治療におけるゲノム解析
  • Invited
• [Presentation] 神経幹細胞の増殖期からニューロン分化期への転換 (2019)
  • Author(s): 岸雄介
  • Organizer: 第346回熊本大学発生研セミナー
  • Invited
• [Presentation] 無変態昆虫マダラシミにおけるゲノム編集の現状 (2019)
  • Author(s): 大出高弘
  • Organizer: 第63回日本応用動物昆虫学会大会
  • Invited
• [Presentation] 非モデル昆虫の新奇形質 : 斑紋と角の遺伝的基盤 (2019)
  • Author(s): 新美輝幸・安藤俊哉・森田慎一
  • Organizer: 第66回日本生態学会大会
  • Invited
• [Presentation] 次世代シーケンサを用いた病原細菌におけるゲノム解析の進展 (2019)
  • Author(s): 林哲也
  • Organizer: 日本ゲノム微生物学会2019
  • Invited
• [Presentation] 次世代シーケンサを用いた病原細菌におけるゲノム解析の進展 (2019)
  • Author(s): 林哲也
  • Organizer: 日本農芸化学会2019
  • Invited
• [Presentation] 腸内細菌と宿主のクロストークを媒介するエクソソーム (2019)
  • Author(s): 園山 慶
  • Organizer: 日本農芸化学会2019年度大会シンポジウム
  • Invited
• [Presentation] RNAi法で探る非モデル昆虫の形作りの仕組み. (2019)
  • Author(s): 新美輝幸・安藤俊哉・森田慎一
  • Organizer: 日本農薬学会第44回大会
  • Invited
• [Presentation] 進化的な保存性の評価に基づく肺炎球菌の病原因子の探索 (2019)
  • Author(s): 山口雅也, 後藤花奈, 竹村 萌, 広瀬雄二郎, 住友倫子, 中田匡宣, 川端重忠
  • Organizer: 第92回 日本細菌学会総会
• [Presentation] Rhizobium vitis VAR03-1株によるブドウ根頭がんしゅ病の抑制機構の解析 (2019)
  • Author(s): 石井智也・齊藤晶・渡邉恵・松井英譲・山本幹博・一瀬勇規・豊田和弘・川口章・能年義輝
  • Organizer: H31年度日本植物病理学会大会
• [Presentation] 神経幹細胞におけるbHLH型転写因子のダイナミックな発現制御機構 (2019)
  • Author(s): 山田 真弓
  • Organizer: NEURO2019
• [Presentation] DIpartite : a Tool for Detecting Bipartite Motif by Taking into Account Base Interdependencies (2019)
  • Author(s): Vahed M, Ishihara j, Takahashi H.
  • Organizer: The 7th Global Network Forum on Infection and Immunity
• [Presentation] Towards spatial and temporal control of gene knockout : transgenic approaches (2019)
  • Author(s): Koichi Kawakami
  • Organizer: The 8th Strategic Conference of Zebrafish Investigators
• [Presentation] DIpartite : a Tool for Detecting Bipartite Motif by Taking into Account Base Interdependencies (2019)
  • Author(s): Ishihara J, Vahed M, Takahashi H.
  • Organizer: The International symposium organized by “Platform for Advanced Genome Science” -FRONTIERS OF GENOME SCIENCE-
• [Presentation] バルクシーケンスによるビワがんしゅ病抵抗性遺伝子(Pse-a)領域の推定 (2019)
  • Author(s): 松隈公孝・石本慶一郎・稗圃直史・永野幸生・伊藤武彦・奥野未来・豊田敦・永野惇・山本俊哉・福田伸二
  • Organizer: 園芸学会
• [Presentation] Characterization of heat-responsible novel nuclear body containing MALAT1 (2019)
  • Author(s): 秋光信佳
  • Organizer: 染色体WS
• [Presentation] Helicobacter cinaedi の DNA 修飾関連遺伝子ノックアウト株における遺伝子発現変化 (2019)
  • Author(s): 林原絵美子, 豊田 敦, 森 茂太郎, 金 玄, 柴山 恵吾
  • Organizer: 第92回日本細菌学会総会
• [Presentation] ゼニゴケMarchantiapolymorphaと珪藻Nitzschiasp. NIES4239のゲノム解析 (2019)
  • Author(s): 望月孝子、谷沢靖洋、中村保一, 他
  • Organizer: 第60回植物生理学会年会
• [Presentation] ニガウリにおける染色体レベルの全ゲノム配列情報整備へ向けて (2019)
  • Author(s): 松村英生、太郎良和彦、谷合直樹、宮城徳道、高木宏樹、浦崎直也
  • Organizer: 日本育種学会第135回講演会
• [Presentation] 野生イネの持つカリウム欠乏耐性遺伝子の同定 (2019)
  • Author(s): 大森 良弘, 藤原 徹
  • Organizer: 日本育種学会第135回講演会
• [Presentation] ショウジョウバエsmall ovary(sov)によるトランスポゾン抑制機構 (2019)
  • Author(s): 猪谷紗来、三好啓太、齋藤都暁
  • Organizer: 日本遺伝学会春季分科会
• [Presentation] mitoTALENによるミトコンドリアゲノム編集 : シロイヌナズナATP6の遺伝子破壊とmitoTALEN技術の改良 (2019)
  • Author(s): 菅谷 元, 鶴田 遊, 柳瀬 俊吾, 亘 悠太, 堤 伸浩, 有村 慎一
  • Organizer: 日本育種学会135回講演会
• [Presentation] 日本産短日性ウキクサにおける限界日長変化に伴う概日時計周期の変化 (2019)
  • Author(s): 村中智明、小山時隆、工藤洋
  • Organizer: 日本生態学会第66回全国大会
• [Presentation] 微生物ゲノムアノテーションツールDFASTの開発 (2019)
  • Author(s): 谷沢靖洋、藤澤貴智、有田正規、中村保一
  • Organizer: 第13回ゲノム微生物学会年会
• [Presentation] Endophyte-mediated control of fungal pathogenesis in Arabidopsis thaliana (2019)
  • Author(s): Kuldanai Pathompitaknukul
  • Organizer: 平成31年日本植物病理学会大会
• [Presentation] ホウレンソウY染色体雄特異的領域の座乗遺伝子同定および進化年代推定 (2019)
  • Author(s): 岡崎 洋助, 平川 英樹, 鈴木 穣, 小野寺 康之
  • Organizer: 園芸学会 平成31年度春季大会
• [Presentation] トウガラシ(Capsicum chinense)の高温期における花粉発芽率の改善に関わる候補遺伝子領域 (2019)
  • Author(s): 山崎 彬、白澤健太、細川宗孝
  • Organizer: 園芸学会平成31年度春季大会
• [Presentation] トウガラシの葉が持つ強力なRNase活性を制御する遺伝子座の特性 (2019)
  • Author(s): 梅林綾香・安井康夫・白澤健太・細川宗孝
  • Organizer: 園芸学会平成31年度春季大会
• [Presentation] Allium cepa全ゲノム解析の進捗と今後の課題 (2019)
  • Author(s): 執行正義
  • Organizer: 園芸学会平成31年度春季大会 第24回ネギ類研究小集会
• [Presentation] トンボの「性スペクトラム」に関わる紫外線反射の分子機構. (2019)
  • Author(s): 二橋亮
  • Organizer: 性スペクトラムー連続する表現型としての雌雄 第1回 若手研究会.
• [Presentation] トンボの色覚および紫外線反射の分子基盤. (2019)
  • Author(s): 二橋亮
  • Organizer: 生物資源ゲノム解析拠点 研究報告会.
• [Presentation] アサガオの刷毛目絞とエピゲノム解析 (2019)
  • Author(s): 星野敦, 森田裕将, 長岐清孝
  • Organizer: 第10回アサガオ研究集会
• [Presentation] 神経幹細胞分化における染色体接着因子コヒーシンの機能解析 (2019)
  • Author(s): 藤田幸、山下俊英
  • Organizer: 第124回日本解剖学会総会・全国学術集会
• [Presentation] エピジェネティックな機構を介した精子発生制御メカニズムの解析 (2019)
  • Author(s): 小林裕貴、尾野道男、溝口敬太、夏目幸治、富澤信一、河越龍方、水木信久、小倉淳郎、大保和之
  • Organizer: 第124回日本解剖学会総会全国学術集会
• [Presentation] ADAR1-mediated RNA editing is required for thymic self-tolerance and prevention of autoimmunity (2019)
  • Author(s): Nakahama Taisuke
  • Organizer: 第20回武田科学振興財団生命科学シンポジウム「RNAネオバイオロジー」
• [Presentation] 4C解析による核内セントロメア構造 分子基盤とその役割の解明 (2019)
  • Author(s): 西村浩平
  • Organizer: 第36回 染色体ワークショップ
• [Presentation] The nutritional basis of Drosophila associated microbes for larval growth (2019)
  • Author(s): 牟禮あゆみ
  • Organizer: 第3回京都生体質量分析研究会シンポジウム
• [Presentation] アサガオの刷毛目絞を司るエピジェネティックな遺伝子発現御 (2019)
  • Author(s): 星野敦, 森田裕将, 長岐清孝
  • Organizer: 第60回日本植物生理学会年会
• [Presentation] 生理生態学研究のための植物の蒸散・吸水過程のシンプルモデル (2019)
  • Author(s): 桑形恒男, 伊川浩樹
  • Organizer: 第60回日本植物生理学会年会
• [Presentation] ゼニゴケMarchantia polymorphaと珪藻Nitzschia sp. NIES4239のゲノム解析 (2019)
  • Author(s): 望月孝子, 谷澤靖洋, 山岡尚平, 西浜竜一, 金澤建彦, 上田貴志, 大和勝幸, 河内孝之, 谷藤吾朗, 神川龍馬, 中村 保一
  • Organizer: 第60回日本植物生理学会年会(名古屋)
• [Presentation] 腸内共生細菌がつくるカメムシの緑体色 (2019)
  • Author(s): 森山実、深津武馬
  • Organizer: 第63回二本応用動物昆虫学会大会
• [Presentation] 無変態昆虫マダラシミにおける幼若ホルモン関連遺伝子群の発現解析 (2019)
  • Author(s): 峯村俊儀、大出髙弘、新美輝幸、塩月孝博、大門高明
  • Organizer: 第63回二本応用動物昆虫学会大会
• [Presentation] Allopatric, sympatric, and hybrid speciation in a lacustrine medaka species complex (2019)
  • Author(s): Ixchel F. Mandagi, Daniel F. Mokodongan, Koji Mochida, Nobuyuki Inomata, Atsushi J. Nagano, Jun Kitano, Kazunori Yamahira
  • Organizer: 第66回日本生態学会大会
• [Presentation] Speciation driven by repeated colonization in a Wallacean ancient lake (2019)
  • Author(s): Sutra Nobu, Junko Kusumi, Atsushi J. Nagano, Masatoshi Matsunami, Ryosuke Kimura, Kazunori Yamahira
  • Organizer: 第66回日本生態学会大会
• [Presentation] Gut microbiome, novel therapeutic targets for preventing atherosclerotic cardiovascular diseases (2019)
  • Author(s): 山下 智也、吉田 尚史、平田 健一
  • Organizer: 第83回日本循環器学会学術集会
• [Presentation] トロポミオシンをコードするlev-11遺伝子の選択的スプライシング制御 (2019)
  • Author(s): 黒柳秀人
  • Organizer: 東京地区線虫勉強会
• [Presentation] 魚類における性染色体のターンオーバー (2019)
  • Author(s): 菊池潔
  • Organizer: 東京農業大学生物資源ゲノム解析拠点シンポジウム
• [Presentation] 有用微生物群の光環境応答メカニズムに関する研究 (2019)
  • Author(s): 角悟、兼崎友、吉川博文、上田賢志、髙野英晃
  • Organizer: 東京農業大学生物資源ゲノム解析拠点研究報告会
• [Presentation] ネパール産ミカヅキモ属の多様性と新規交配群Hの発見 (2019)
  • Author(s): 小林弘佳、川口也和子、Mangal Man Shakya、土松隆志、関本弘之、土金勇樹
  • Organizer: 日本植物分類学会18回大会
• [Presentation] Volvox属Merrillosphaera節における性染色体領域の拡大 (2019)
  • Author(s): 山本荷葉子、浜地貴志、豊岡博子、野口英樹、水口洋平、豊田敦、野崎 久義
  • Organizer: 日本藻類学会第43回大会
• [Presentation] プリ属の性決定領域ゲノム配列比較 (2019)
  • Author(s): 小山喬・車遥介・菊池潔・森島輝・豊田敦
  • Organizer: 平成31年度 日本水産学会春季大会
• [Presentation] Somatic mutations on cancer-associated genes in endometriosis and normal uterine endometrium (2018)
  • Author(s): Kosuke Yoshihara
  • Organizer: 17th biennial meeting of the international gynecologic cancer society
  • Int'l Joint Research / Invited
• [Presentation] Foxr2 promotes formation of CNS-embryonal tumors in a Trp53-deficient background (2018)
  • Author(s): 髙祖 秀登
  • Organizer: 19th International Congress of Neuropathology (ICN 2018)
  • Int'l Joint Research / Invited
• [Presentation] How have sex chromosomes become a major sex-determination system in spite of their potential disadvantage? (2018)
  • Author(s): Nozawa, Masafumi
  • Organizer: 2017 UOS-TMU Joint Conference
  • Int'l Joint Research / Invited
• [Presentation] Chromatin regulation of neural stem cell fate during neocortical development (2018)
  • Author(s): Yusuke Kishi, Hikaru Eto, Haruhiko Koseki and Yukiko Gotoh
  • Organizer: 2018 Joint Meeting between The Neurodevelopmental Biology Section of The Korean Society for Molecular and Cellular Biology and Japanese Developmental Neuroscientists
  • Int'l Joint Research / Invited
• [Presentation] Chromatin regulation of neural stem cell fate during neocortical development. (2018)
  • Author(s): Yusuke Kishi, Hikaru Eto and Yukiko Gotoh
  • Organizer: 2018 Joint Meeting between The Neurodevelopmental Biology Section of The Korean Society for Molecular and Cellular Biology and Japanese Developmental Neuroscientisis
  • Int'l Joint Research / Invited
• [Presentation] Correlation analysis of single nucleosome dynamics reveals compact chromation domain organization in living cells. (2018)
  • Author(s): Kazuhiro Maeshima
  • Organizer: 2018 Telluride workshop Chromatin Structure and Dynamics
  • Int'l Joint Research / Invited
• [Presentation] The ectodomain shedding of NRG1 underlies spatial and temporal regulation of synaptogenesis and myelination of developing motor neurons (2018)
  • Author(s): F. Sato, M. Tabuchi, A. Kamezaki, A. Asakawa, K. Kawakami, A. Sehara-Fujisawa
  • Organizer: 22nd Biennial Meeting of the International Society of Developmental Neuroscience
  • Int'l Joint Research / Invited
• [Presentation] Dynamic regulation of tRNA modification under physiological and pathological conditions (2018)
  • Author(s): Tsutomu Suzuki
  • Organizer: 27th tRNA conference
  • Int'l Joint Research / Invited
• [Presentation] GWAS and further genetic analysis of gout (2018)
  • Author(s): Hirotaka Matsuo, Akiyoshi Nakayama, Tappei Takada, Masahiro Nakatochi, Yukinori Okada, Kimiyoshi Ichida
  • Organizer: 2nd APGC Annual Meeting
  • Int'l Joint Research / Invited
• [Presentation] Chromatin-level regulation of neural stem/progenitor cell fate. (2018)
  • Author(s): Yukiko Gotoh
  • Organizer: 2nd IRCN International Symposium
  • Int'l Joint Research / Invited
• [Presentation] Non-Helicobacter pylori microbiome in gastric carcinogenesis. (2018)
  • Author(s): Yoshio Yamaoka
  • Organizer: Asian Pacific Digestive Week (APDW 2018)
  • Int'l Joint Research / Invited
• [Presentation] Regulation of neural stem/progenitor cell fate during development and in the adult. (2018)
  • Author(s): Yukiko Gotoh
  • Organizer: Bordeaux Cajal School 2018
  • Int'l Joint Research / Invited
• [Presentation] Regulation of embryonic and adult neural stem cell fate. (2018)
  • Author(s): Yukiko Gotoh
  • Organizer: Cold Spring Harbor (CSH) Asia 2018, Stem Cell Crossroads
  • Int'l Joint Research / Invited
• [Presentation] Correlation analysis of single nucleosome dynamics reveals compact chromatin domain organization in living cells. (2018)
  • Author(s): Kazuhiro Maeshima
  • Organizer: Colorado Chromatin Meeting 2018
  • Int'l Joint Research / Invited
• [Presentation] Requirement of DDX6 medicated P-body formation for the function of NANOS2 In male germ cell differentiation (2018)
  • Author(s): 相賀 裕美子
  • Organizer: COMBIO2018
  • Int'l Joint Research / Invited
• [Presentation] MOLECULAR DISSECTION OF NANOS-MEDIATED RNA-REGULATION (2018)
  • Author(s): 相賀 裕美子
  • Organizer: CSH-Germ Cells Meeting
  • Int'l Joint Research / Invited
• [Presentation] Metabolic regulation of tRNA modifications associated with mitochondrial diseases (2018)
  • Author(s): Tsutomu Suzuki
  • Organizer: EMBO workshop on "Molecular Biology of Mitochondrial Gene Expression" in 2018
  • Int'l Joint Research / Invited
• [Presentation] LEA : a web tool to explore the microbiome universe (2018)
  • Author(s): Higashi K
  • Organizer: FRONTIERS OF GENOME SCIENCE
  • Int'l Joint Research / Invited
• [Presentation] Understanding tandem repeats and methylation with long-read sequencing (2018)
  • Author(s): Shinichi Morishita
  • Organizer: Genome Biophysics : Integrating Genomics and Biophysics
  • Int'l Joint Research / Invited
• [Presentation] Centromere Dynamics During Mitotic progression (2018)
  • Author(s): Tatsuo Fukagawa
  • Organizer: Gordon Research Conference
  • Int'l Joint Research / Invited
• [Presentation] The To12 Transposon Technology and Its Application to Genetic Studies in Zebrafish (2018)
  • Author(s): Koichi Kawakami
  • Organizer: International Joint Conference on Genetics & Medicine
  • Int'l Joint Research / Invited
• [Presentation] Regulation of embryonic and adult neural stem cell fate (2018)
  • Author(s): Yukiko Gotoh
  • Organizer: International Society for Developmental Neuroscience (ISDN) 2018 in Mara
  • Int'l Joint Research / Invited
• [Presentation] Toward understanding ecophysiology of a bloom-forming alga, Heterosigma akashiwo (2018)
  • Author(s): Shoko Ueki
  • Organizer: International Symposium : “Advances in Environmental Microbiology and Microbial Biotechnology” Universidad de La Frontera
  • Int'l Joint Research / Invited
• [Presentation] Regulation of neural stem cell and its involvement in brain development. (2018)
  • Author(s): Yukiko Gotoh
  • Organizer: Japan-Asia-NIBR Drug Discovery and Translational Medicine Symposium
  • Int'l Joint Research / Invited
• [Presentation] Integrated database for microbe “MicrobeDB. jp” (2018)
  • Author(s): Kurokawa K
  • Organizer: JSME2018&10thASME
  • Int'l Joint Research / Invited
• [Presentation] Genome and Transcriptome Analyses of Striga spp. (2018)
  • Author(s): Satoko Yoshida, Seungill Kim, Eric K, Wafula, Thomas Spallek, Yong-Min Kim, Jaakko Tanskanen, Songkui Cui, Yasunori Ichihashi, Alan H, Schulman, Claude W, dePamphillis, Doil Choi, Ken Shirasu
  • Organizer: Korea Genome Organization
  • Int'l Joint Research / Invited
• [Presentation] Helicobacter pylori : Challenging the present and future. (2018)
  • Author(s): Yoshio Yamaoka
  • Organizer: Makassar Gastroenterology Hepatology Update 2018 (MAGEHAP2018) & Gastroenterology-Hepatology Update ; Surabaya-Denpasar-Malang-Makassar 14 (SUDEMMA14) Joint conference.
  • Int'l Joint Research / Invited
• [Presentation] Regulation of neural stem/progenitor cell fate (2018)
  • Author(s): Yukiko Gotoh
  • Organizer: National Chung Kung University (NCKU) Seminar
  • Int'l Joint Research / Invited
• [Presentation] Regulation of neural stem/progenitor cell fate (2018)
  • Author(s): Yukiko Gotoh
  • Organizer: Neuroscience Program of Academia Sinica (NPAS) Seminar
  • Int'l Joint Research / Invited
• [Presentation] The role of CD69 on iNKT cell development in the thymus. (2018)
  • Author(s): Kimura M. Y.
  • Organizer: NIH Thymus symposium
  • Int'l Joint Research / Invited
• [Presentation] Regulation of neural stem/progenitor cell fate during neocortical development (2018)
  • Author(s): Yukiko Gotoh
  • Organizer: International Society for Stem Cell Research (ISSCR) 2018 Annual Meeting
  • Int'l Joint Research / Invited
• [Presentation] Understanding tandem repeats and DNA methylation using SMRT sequencing (2018)
  • Author(s): Shinichi Morishita
  • Organizer: SMRT Leiden
  • Int'l Joint Research / Invited
• [Presentation] STAT3 : A Key Transcriptional Factor Not Only in Embryo Implantation but also in Endometrial Regeneration (2018)
  • Author(s): Hirota Y, Hiraoka T, Saito-Fujita T, Osuga Y.
  • Organizer: Society for Reproductive Investigation, 65th Annual Scientific Meeting
  • Int'l Joint Research / Invited
• [Presentation] Regulation of neural progenitor/stem cell fate during development. (2018)
  • Author(s): Yukiko Gotoh
  • Organizer: Stem Cell Dynamics Throughout Life : From Development to the Adult
  • Int'l Joint Research / Invited
• [Presentation] Evolution of three independent neo-sex chromosome systems in Drosophila (2018)
  • Author(s): Nozawa, Masafumi
  • Organizer: Symposium on Evolutionary Genetics and Omics
  • Int'l Joint Research / Invited
• [Presentation] Space stay of zebrafish (2018)
  • Author(s): Atsuko Sehara
  • Organizer: The 15th Korea-Japan Joint Seminar on Space Environment Utilization Research
  • Int'l Joint Research / Invited
• [Presentation] Helicobacter pylori eradication and Gastric cancer prevention. (2018)
  • Author(s): Yoshio Yamaoka
  • Organizer: The 2018 International Forum of Helicobacter pylori, Gastrointestinal Microbiota and the Associated diseases.
  • Int'l Joint Research / Invited
• [Presentation] Molecular mechanisms underlying color formation in dragonflies. (2018)
  • Author(s): Futahashi Ryo
  • Organizer: The 28th Annual Meeting of the Japanese Society for Pigment Cell Research.
  • Int'l Joint Research / Invited
• [Presentation] RNA modification, a chemical diversity for biological function (2018)
  • Author(s): Tsutomu Suzuki
  • Organizer: The 2nd Joint Australia-Japan joint RNA meeting 2018
  • Int'l Joint Research / Invited
• [Presentation] H. pylori-related pathogenesis of diffuse-type gastric cancer. (2018)
  • Author(s): Yoshio Yamaoka
  • Organizer: The 2nd Seoul international Symposium on Helicobacter and Upper Gastrointestinal Diseases (2nd SI-HUGSymposium) &26th Annual Meeting of the Korean College of Helicobacter and Upper Gastrointestinal Research.
  • Int'l Joint Research / Invited
• [Presentation] Updated information about the pathogenesis of Helicobacter pylori infection. (2018)
  • Author(s): Yoshio Yamaoka
  • Organizer: The 8th Shanghai International Conference of Gastroenterology
  • Int'l Joint Research / Invited
• [Presentation] Regulation of neural stem/progenitor cell fate during development. (2018)
  • Author(s): Yukiko Gotoh
  • Organizer: The Company of Biologists Workshop : Development and evolution of the human neocortex
  • Int'l Joint Research / Invited
• [Presentation] Regulation of astrocyte production during neocortical development. (2018)
  • Author(s): Yukiko Gotoh
  • Organizer: The Joint Congress of the 40th Annual Meeting of Japanese Society of Biological Psychiatry and the 61st Annual Meeting of the Japanese Society for Neurochemistry
  • Int'l Joint Research / Invited
• [Presentation] Regulation of neural stem/progenitor cell fate during brain development. (2018)
  • Author(s): Yukiko Gotoh
  • Organizer: Vienna BioCenter (VBC) Seminars Seminars
  • Int'l Joint Research / Invited
• [Presentation] An Experimental Approach For Deciphering The First Steps In the Evolution Of Essential Insect Symbiosis (2018)
  • Author(s): 古賀隆一
  • Organizer: 第46回内藤コンファレンス
  • Int'l Joint Research / Invited
• [Presentation] キンギョ品種のゲノム解析と多様な形質を規定する遺伝子の探索Genomic diversity and loci under selection during goldfish (Carassius auratus) domestication (2018)
  • Author(s): 大森義裕
  • Organizer: 日本生化学会年会
  • Int'l Joint Research / Invited
• [Presentation] Characterization of heat-responsible novel nuclear body containing MALAT1 (2018)
  • Author(s): Rena Onoguchi-Mizutani
  • Organizer: 第25回Tokyo RNA Club
  • Int'l Joint Research / Invited
• [Presentation] Symbiosis, Evolution and Biodiversity (2018)
  • Author(s): 深津武馬
  • Organizer: 第46回内藤コンファレンス
  • Int'l Joint Research / Invited
• [Presentation] 共生細菌がもたらす新規生物機能 (2018)
  • Author(s): 深津武馬
  • Organizer: 第60回日本消化器病学会大会
  • Int'l Joint Research / Invited
• [Presentation] The population structure of enterohemorrhagic Escherichia coli 026 : H11 with recent and repeated stx2 acquisition in multiple lineages (2018)
  • Author(s): Yoshitoshi Ogura, Kazuko Seto, Shuji Yoshino, Junko Isobe, Yoshiki Etoh, Keiko Kimata, Eriko Maeda, Denis Piérard, Masahiro Kusumoto, Masato Akiba, Tadasuke Ooka, Nozomi Ishijima, Ken-ichi Lee, Sunao Iyoda, Jacques G. Mainil, and Tetsuya Hayashi
  • Organizer: 10th international symposium on Shiga toxin producing Escherichia coli infections
  • Int'l Joint Research
• [Presentation] The ectodomain shedding of NRG1 underlies spatial and temporal regulation of synaptogenesis and myelination of developing motor neurons (2018)
  • Author(s): F. Sato, M. Tabuchi, A. Kamezaki, A. Asakawa, K. Kawakami, A. Sehara-Fujisawa
  • Organizer: 11th meeting of the Zebrafish Disease Models Society (ZDM11)
  • Int'l Joint Research
• [Presentation] Sleeping Beauty transposon insertional mutagenesis identified driver genes of uterine leiomyosarcoma (2018)
  • Author(s): Michiko Kodama
  • Organizer: 17th Biennial meeting of the international gynecologic cancer society
  • Int'l Joint Research
• [Presentation] Meta-analysis of community sequencing datasets reveals a key role of generalist species in microbial dispersion and evolution. (2018)
  • Author(s): Wataru Iwasaki, Sira Sriswasdi, and Ching-chia Yang
  • Organizer: 17th International Symposium on Microbial Ecology (ISME17)
  • Int'l Joint Research
• [Presentation] Neuron-specific histone modification analysis of Alzheimer's diseae brain (2018)
  • Author(s): Kagari Mano, Tatsuo Mano, Atsushi Iwata, Shigeo Murayama, Tatsushi Toda
  • Organizer: 19th International Congress of Neuropathology
  • Int'l Joint Research
• [Presentation] Immune Response to Tonsillar Microbiome Are Perturbed in the Development of IgA Nephropathy (2018)
  • Author(s): Hiroki Yamaguchi, Shin Goto, Masataka Yonezawa, Masafumi Tsuchida, Hirofumi Watanabe, Suguru Yamamoto, Yoshikatsu Kaneko, Ichiei Narita
  • Organizer: 2018 American Society of Nephrology Kidney Week
  • Int'l Joint Research
• [Presentation] Study on gravity-dependent skeletal muscle maintenance mechanisms using Zebrafish, aquatic organisms (2018)
  • Author(s): Fuminori Sato, Minyong Choi, Zi Wang, Kiyomi Imamura, Terumi Horiuchi, Wu Quan, Ikumi Fujita, Satoko Uchida, Mitsuyasu Kato, Fumiaki Tanigaki, Akira Higashibata, Masafumi Muratani, Junya Kobayashi, Akihisa Takahashi, Sumio Sugano, Fumio Matsuzaki, Yutaka Suzuki, Koichi Kawakami, Atsuko Sehara-Fujisawa
  • Organizer: 2018 ASCB EMBO Meeting
  • Int'l Joint Research
• [Presentation] Morphology, phylogeny and whole genome sequence of a hitherto undescribed scaly Parmales - a reminiscent of pre-diatom? (2018)
  • Author(s): 佐藤晋也, 吉川伸哉, 南雲保, 出井雅彦, 桑田晃, 一宮睦雄
  • Organizer: 25th International Diatom Symposium
  • Int'l Joint Research
• [Presentation] “Autonomous fruit set” in an F1 hybrid of Capsicum chinense (2018)
  • Author(s): Yamazaki A、Hosokawa M
  • Organizer: 30th International Horticultural Congress
  • Int'l Joint Research
• [Presentation] Correlation analysis of single nucleosome dynamics reveals compact chromatin domain organization in living cells. (2018)
  • Author(s): Kazuhiro Maeshima
  • Organizer: 3R & 3C Meeting 2018
  • Int'l Joint Research
• [Presentation] Functional analysis of MeCP2, the Rett syndrome responsible factor, mediated by microRNA in neural stem cells (2018)
  • Author(s): H Nakashima, K Irie, K Tsujimura, T Imamura, K Nakashima
  • Organizer: 3rd Gage Lab symposium
  • Int'l Joint Research
• [Presentation] Why the circadian clock is circadian : the local adaptation of circadian periods in the photoperiodic flowering of a Japanese short-day duckweed. (2018)
  • Author(s): Tomoaki Muranaka, Hiroshi Kudoh, Tokitaka Oyama
  • Organizer: 46th Naito Conference
  • Int'l Joint Research
• [Presentation] How are aversive stimuli processed in the brain? (2018)
  • Author(s): Koichi Kawakami
  • Organizer: 5th International Conference on “Imaging Structure and Function in the Zebrafish Brain”
  • Int'l Joint Research
• [Presentation] Sleeping Beauty transposon mutagenesis screen identifies cancer genes of uterine leiomyosarcoma dricing sarcomagenesis and lung metastasis (2018)
  • Author(s): Michiko Kodama
  • Organizer: AACR annual meeting 2018
  • Int'l Joint Research
• [Presentation] Tau-related dysfunction of BRCA1 lead to reduced neuronal plasticity in Alzheimer's disease (2018)
  • Author(s): Tatsuo Mano, Atsushi Iwata, Takashi Nonaka, Airi Tarutani, Tadafumi Hashimoto, Masato Hasegawa, Takeshi Iwatsubo, Tatsushi Toda
  • Organizer: AAIC 2018
  • Int'l Joint Research
• [Presentation] COMPREHENSIVE EVALUATION OF THE EFFECTS OF RARE AND COMMON EXONIC ABCG2 VARIANTS ON GOUT SUSCEPTIBILITY (2018)
  • Author(s): Toshihide Higashino, Tappei Takada, Hirofumi Nakaoka, Yu Toyoda, Blanka Stiburkova, Kenji Wakai, Hiroshi Ooyama, Ituro Inoue, Tony R, Merriman, Nariyoshi Shinomiya, Hirotaka Matsuo
  • Organizer: Annual European Congress of Rheumatology EULAR 2018
  • Int'l Joint Research
• [Presentation] Epigenetic regulation for functional centromere formation in Vertebrate Cells (2018)
  • Author(s): 堀 哲也
  • Organizer: ASCB | EMBO 2018 Meeting
  • Int'l Joint Research
• [Presentation] 3D structural analysis of neo-centromere region in vertebrate cells. (2018)
  • Author(s): 西村浩平
  • Organizer: ASCB | EMBO 2018 Meeting
  • Int'l Joint Research
• [Presentation] Identification of Secondary Metabolites Gene Clusters in the Class Ktedonobacteria with Actinomycetes-Like-Morphology (2018)
  • Author(s): Shuhei Yabe, Yu Zheng, Atsushi Toyoda, Yohei Minakuchi, Chang M. Wang, Yasuteru Sakai, Keietsu Abe, Akira Yokota
  • Organizer: ASM microbe 2018
  • Int'l Joint Research
• [Presentation] VITCOMIC2 : Visualization and analysis tool for the phylogenetic composition of microbial communities based on 16S rRNA gene sequences (2018)
  • Author(s): Mori H, Kurokawa K.
  • Organizer: ASM Microbe 2018
  • Int'l Joint Research
• [Presentation] Characterization of epigenetic states in Brassica rapa L. (2018)
  • Author(s): 藤本 龍 ; アクタ アヤシャ ; 高橋 聡史 ; 安田 剛志 ; 鈴木 穣 ; デニス エリザベス ; 関 原明
  • Organizer: Brassica 2018
  • Int'l Joint Research
• [Presentation] Correlation analysis of single nucleosome dynamics reveals compact chromatin domain organization in living cells. (2018)
  • Author(s): Kazuhiro Maeshima
  • Organizer: Cold Spring Harbor Meeting “Nuclear Organization & Function
  • Int'l Joint Research
• [Presentation] Analysis of the gene expression changes during male germ cell differentiation with scRNA-Seq (2018)
  • Author(s): 島田 龍輝, 相賀 裕美子
  • Organizer: CSH-Germ Cells Meeting
  • Int'l Joint Research
• [Presentation] Identification of functional targets reveals that suppression of Pumilio-mediated mRNA decay increases cell resistance to DNA damage (2018)
  • Author(s): 秋光信佳
  • Organizer: EMBO meeting
  • Int'l Joint Research
• [Presentation] Development of Marchantia Gene Nomenclature Database (2018)
  • Author(s): Yasuhiro Tanizawa, Takako Mochizuki, Shohei Yamaoka, Ryuichi Nishihama, Takehiko Kanazawa, Takashi Ueda, Katsuyuki T. Yamato, Takayuki Kohchi, and Yasukazu Nakamura
  • Organizer: EMBO Workshop
  • Int'l Joint Research
• [Presentation] Marpolbase : Construction of the Marchantia polymorpha Genome Database (2018)
  • Author(s): Takako Mochizuki, Yasuhiro Tanizawa, Shohei Yamaoka, Ryuichi Nishihama, Takehiko Kanazawa, Takashi Ueda, Katsuyuki T, Yamato, Takayuki Kohchi, and Yasukazu Nakamura
  • Organizer: EMBO Workshop
  • Int'l Joint Research
• [Presentation] CRISPR/Cas9-based knockouts reveal the action mechanism of the sex pheromone PR-IP in unicellular zygnematophycean alga, Closterium peracerosum-strigosum-littorale complex (2018)
  • Author(s): Sekimoto, H.
  • Organizer: EMBO Workshop -New shores in land plant evolution
  • Int'l Joint Research
• [Presentation] Kmt2b primes spermatogonia stem cells with monovalent and bivalent chromatin for gemline and embryonic development (2018)
  • Author(s): Ohbo K, Tomizawa S, Kobayashi Y, Royo Helene, Peters A. HFM, Anastassiadis K, Stewart A. F.
  • Organizer: EMBO Workshop : From Epigenome towards Epitranscriptome in Cell Fate Choice
  • Int'l Joint Research
• [Presentation] LGP2 regulates microRNA-mediated gene expression network by interacting with an RNA silencing enhancer, TRBP. (2018)
  • Author(s): Tomoko Takahashi, Yuko Nakano, Koji Onomoto, Chiaki Komori, Mitsutoshi Yoneyama, Kumiko Ui-Tei
  • Organizer: EMBO | EMBL Symposia, Innate Immunity in Host-Pathogen Interactions
  • Int'l Joint Research
• [Presentation] Both common and rare genetic variants of ABCG2 are risks for gout (2018)
  • Author(s): Higashino T, Takada T, Nakaoka H, Toyoda Y, Stiburkova B, Miyata H, Ikebuchi Y, Nakashima H, Shimizu S, Kawaguchi M, Sakiyama M, Nakayama A, Akashi A, Tanahashi Y, Kawamura Y, Nakamura T, Wakai K, Okada R, Yamamoto K, Hosomichi K, Hosoya T, Ichida K, Ooyama H, Suzuki H, Inoue I, Merriman TR, Shinomiya N, Matsuo H.
  • Organizer: European Human Genetics Conference 2019
  • Int'l Joint Research
• [Presentation] A hypervariable mitochondrial gene associated with geographical origin in a cosmopolitan bloom-forming alga, Heterosigma akashiwo (2018)
  • Author(s): Shoko Ueki
  • Organizer: International Conference of Harmful Algae
  • Int'l Joint Research
• [Presentation] Genome and Genetic analyses revealed genes involved in plant parasitism in Orobanchaceae (2018)
  • Author(s): Satoko Yoshida, Songkui Cui, Juliane K, Ishida, Thomas Spallek, Takanori Wakatake, Ken Shirasu
  • Organizer: International Plant Molecular Biology 2018
  • Int'l Joint Research
• [Presentation] Chromatin regulation of neural stem cell fate during neocortical development (2018)
  • Author(s): Yusuke Kishi, Masafuji Tsuboi, Naohiro Kuwayama, Yusuke Hirabayashi, Yukiko Gotoh
  • Organizer: International Society for Developmental Neuroscience-(ISDN)
  • Int'l Joint Research
• [Presentation] Ethylene participates in plant parasitism by modulating development and function of the haustorium, an invasive organ in parasitic plants (2018)
  • Author(s): Songkui Cui, Ken Shirasu, Satoko Yoshida
  • Organizer: International Symposium on the Plant Hormone Ethylene
  • Int'l Joint Research
• [Presentation] THE COMPLETE GENOME OF A NON-PHOTOSYNTHETIC DIATOM AND ITS PLASTIDAL SULFOLIPID BIOSYNTHESIS (2018)
  • Author(s): Kamikawa R, Oyama K, Tanizawa Y, Mochizuki T, Nakayama T, Tanifuji, G, Nakamura Y, Kato M, Miyashita H
  • Organizer: ISOP/PSA
  • Int'l Joint Research
• [Presentation] Prediction of functional prognosis in Japanese NF2 patients by phenotype-genotype correlation (2018)
  • Author(s): 寺西裕, 宮脇哲, 本郷博貴, 堂福翔吾, 岡野淳, 高柳俊作, 中冨浩文, 斉藤延人
  • Organizer: NF Conference 2018
  • Int'l Joint Research
• [Presentation] Roses of Nicotinamide adenine dinucleotide (NAD+) metabolism for retinal development and maintenance (2018)
  • Author(s): 渡辺すみ子
  • Organizer: RD2018
  • Int'l Joint Research
• [Presentation] The ribonuclease Regnase-1 maintains iron homeostasis via the destabilization of iron-regulatory transcripts (2018)
  • Author(s): Yoshinaga, M., Mino, T., Takeuchi, O.
  • Organizer: RNA2018
  • Int'l Joint Research
• [Presentation] Human population history in the southwestern coastal region of the Sea of Okhotsk, inferred from ancient genome analysis (2018)
  • Author(s): Takehiro Sato, Noboru Adachi, Ryosuke Kimura, Minoru Yoneda, Hiroki Oota, Atsushi Tajima, Atsushi Toyoda, Hiromi Matsumae, Kae Koganebuchi, Kentaro K. Shimizu, Tsunehiko Hanihara, Andrzej Weber, Hirofumi Kato, Hajime Ishida
  • Organizer: Society of Molecular Biology & Evolution 2018 Annual Meeting
  • Int'l Joint Research
• [Presentation] Analysis of microbes in foods of Drosophila melanogaster in the wild as nutrient sources (2018)
  • Author(s): 牟禮あゆみ
  • Organizer: The 13th Japanese Drosophila Research Conference
  • Int'l Joint Research
• [Presentation] Turnover of sex chromosomes in Takifugu fish (2018)
  • Author(s): Risa Ieda, Shota Tajima, Kazufumi Atsumi, Daigaku Fujikawa, Mana Sato, Yosuke Kuruma, Shun Ohki, Aoi Nozawa, Takashi Koyama, Satoshi Tasumi, Toyoda Atsushi, Sho Hosoya, Kiyoshi Kikuchi
  • Organizer: The 2018 International Symposium of Genetics in Aquaculture
  • Int'l Joint Research
• [Presentation] Revisiting Ohno's hypothesis of dosage compensation by using the neo-sex chromosomes in Drosophila (2018)
  • Author(s): Nozawa, Masafumi
  • Organizer: The 2018 SMBE conference
  • Int'l Joint Research
• [Presentation] A novel multi-domain protein CCAR-1 regulates transcription and co-transcriptional splicing in C. elegans (2018)
  • Author(s): Hidehito Kuroyanagi, Marina Togo-Ohno, Eichi Watabe, Yohei Watanabe, Yutaka Suzuki, Masatoshi Hagiwara
  • Organizer: The 23rd Annual Meeting of the RNA Society
  • Int'l Joint Research
• [Presentation] Characterization of histone H3 lysine 27 tri-methylation in Brassica rapa L. (2018)
  • Author(s): 藤本 龍 ; アクタ アヤシャ ; 高橋 聡史 ; 西田 菜美子 ; 安田 剛志 ; 鈴木 穣 ; 関 原明 ; デニス エリザベス
  • Organizer: The 25th International Congress on Sexual Plant Reproduction
  • Int'l Joint Research
• [Presentation] Generalist species drive microbial dispersion and evolution. (2018)
  • Author(s): Sira Sriswasdi, Ching-Chia Yang, and Wataru Iwasaki
  • Organizer: The 26th international conference on Intelligent Systems for Molecular Biology (ISMB2018)
  • Int'l Joint Research
• [Presentation] On the evolutionary origin of insect wings : insights from basal insects (2018)
  • Author(s): Takahiro Ohde, Taro Mito and Teruyuki Niimi
  • Organizer: The 46th Naito Conference "Mechanisms of Evolution and Biodiversity"
  • Int'l Joint Research
• [Presentation] Role of CD69 on iNKT cell development in the thymus. (2018)
  • Author(s): Kimura M. Y., Hayashizaki, K., Yagi, R., Endo, Y., Motohashi, S. and Nakayama, T.
  • Organizer: The 47th Annual Meeting of The Japanese Society for Immunology
  • Int'l Joint Research
• [Presentation] Integration of transcriptomics and metabolomics reveals a role for cellular methylation process during Bombyx mori nucleopolyhedrovirus infection (2018)
  • Author(s): Hiroyuki Hikida, Yutaka Suzuki, Munetaka Kawamoto, Toru Shimada, Susumu Katsuma
  • Organizer: The 51st Annual Meeting of the Society for Invertebrate Pathology
  • Int'l Joint Research
• [Presentation] Dynamic Changes of Chromatin Structure and Transcription By Transient Expression of HTLV-1 Tax in ATL Cells. (2018)
  • Author(s): Kurita, D., Yasunaga, JI., Tanaka, A., Mahgoub, M., and Matsuoka, M.
  • Organizer: The 60th American Society of Hematology Annual Meeting and Exposition
  • Int'l Joint Research
• [Presentation] LGP2, a virus sensor, interacts with TRBP and regulates gene expression via TRBP-bound miRNAs. (2018)
  • Author(s): Yuko Nakano, Tomoko Takahashi, Koji Onomoto, Mitsutoshi Yoneyama, Kumiko Ui-Tei
  • Organizer: The 7th Global Network Forum on Infection and Immunity
  • Int'l Joint Research
• [Presentation] Clonal expansion and diversification of cancer-associated mutations in endometriosis and normal endometrium. (2018)
  • Author(s): Nakaoka H, Suda K, Yoshihara K, Enomoto T, Inoue I.
  • Organizer: The American Society of Human Genetics 68th Annual Meeting
  • Int'l Joint Research
• [Presentation] Identification of potential regulatory mutations using multi-omics analysis and haplotyping of lung adenocarcinoma cell lines (2018)
  • Author(s): Sereewattanawoot, Sarun
  • Organizer: The Biology of Genome
  • Int'l Joint Research
• [Presentation] Emergence and evolution of Shiga toxin-producing Escherichia coli (STEC) and enteropathogenic E. coli (EPEC) from bovine commensal E. coli (2018)
  • Author(s): Yoshitoshi Ogura
  • Organizer: The Second SMBE Satellite Workshop on Genome Evolution in Pathogen Transmission and Disease
  • Int'l Joint Research
• [Presentation] Establishment of an efficient breeding system for Ceratocystis canker resistance fig (Ficus carica) (2018)
  • Author(s): Kenta Shirasawa, Hiroshi Yakushiji, Takeshige Morita, Shota Jikumaru, Kazuki Mori, Hitoshi Nogata, Chiharu Hirata, Kosuke Tashiro, Tsuyoshi Habu, Sangwan Kim, Shuichi Himeno, Satoru Kuhara, Hidetoshi Ikegami
  • Organizer: XXX. International Horticultural Congress (IHC2018)
  • Int'l Joint Research
• [Presentation] Whole genome resequencing and the phenotypic variations of the goldfish (Carassius auratus) strains (2018)
  • Author(s): 大森義裕
  • Organizer: 小型魚類研究会
  • Int'l Joint Research
• [Presentation] Decoding mouse embryonic neural stem cell fate by BMP2 responsiveness (2018)
  • Author(s): SAYAKO KATADA
  • Organizer: 第16回 幹細胞シンポジウム
  • Int'l Joint Research
• [Presentation] Analysis of the impact of choroid plexus on adult neurogenesis focusing on a key chronic inflammatory regulator, Angiopoietin-like protein 2 (2018)
  • Author(s): 山下りえ, 中島欽一, 堅田明子
  • Organizer: 第41回 日本神経科学大会
  • Int'l Joint Research
• [Presentation] Galactose-deficient IgA1 expressed in tonsillar crypts correlates with the severity of glomerular injury in patients with IgA nephropathy (2018)
  • Author(s): Hiroki Yamaguchi, Shin Goto, Masafumi Tsuchida, Hirofumi Watanabe, Suguru Yamamoto, Yoshikatsu Kaneko, Ichiei Narita.
  • Organizer: 第61回日本腎臓学会学術総会
  • Int'l Joint Research
• [Presentation] Loss of RNA degradation factors upon Salmonella infection stabilizes nuclear long. non-coding RNAs (2018)
  • Author(s): 秋光信佳
  • Organizer: 内藤カンファレンス
  • Int'l Joint Research
• [Presentation] トランスポゾンを用いたマウス子宮平滑筋肉腫発症に関与するドライバー遺伝子のスクリーニング (2018)
  • Author(s): 小玉美智子
  • Organizer: 日本癌学会学術総会
  • Int'l Joint Research
• [Presentation] Therapeutic response monitoring using digital PCR for patient-specific circulating tumor DNA identified by an esophageal squamous cell carcinoma-specific sequencing panel. (2018)
  • Author(s): Takeshi Iwaya, Fumitaka Endo, Yasushi Sasaki, Yuji Akiyama, Akira Sasaki, Mari Masuda, Tesshi Yamada, Takashi Tokino, Satoshi Nishizuka
  • Organizer: 米国臨床腫瘍学会
  • Int'l Joint Research
• [Presentation] Regulation of neural stem/progenitor cell fate during neocortical development. (2018)
  • Author(s): Yukiko Gotoh
  • Organizer: 134th WPI-IIIS Seminar
  • Invited
• [Presentation] 腸内細菌叢と宿主の新しいクロストークシステムの発見をめざして (2018)
  • Author(s): 園山 慶
  • Organizer: 2018年度 日本乳酸菌学会泊まり込みセミナー
  • Invited
• [Presentation] 半導体シーケンサーを活用したがんゲノム解析 (2018)
  • Author(s): 佐々木泰史
  • Organizer: Applied Biosystems and Ion Torrent World Tour 2018
  • Invited
• [Presentation] ゼブラフィッシュ : 基礎生物学から薬学・医学分野への応用まで (2018)
  • Author(s): 川上浩一
  • Organizer: CBI学会2018年大会
  • Invited
• [Presentation] Dynamics on kinetochore assembly (2018)
  • Author(s): Tatsuo Fukagawa
  • Organizer: Chromosome Stability 2018
  • Invited
• [Presentation] 長鎖ノンコーディングRNAから学ぶ人工RNAデザイン (2018)
  • Author(s): 秋光信佳
  • Organizer: ConBio2018
  • Invited
• [Presentation] 線虫の栄養による休眠制御機構の研究 (2018)
  • Author(s): 福山征光
  • Organizer: ExCELLS研究会「休眠と代謝研究会」
  • Invited
• [Presentation] ナミテントウの斑紋多型原因遺伝子の同定と今後の研究展開 (2018)
  • Author(s): 新美輝幸・安藤俊哉
  • Organizer: JSDB 秋季シンポジウム2018
  • Invited
• [Presentation] マウスに自然に生じる突然変異の網羅的解析から見えてきたほ乳類ゲノム多様性維持の戦略 (2018)
  • Author(s): 権藤洋一
  • Organizer: NAISTセミナー
  • Invited
• [Presentation] 視細胞変性の発症と進展における眼内グリア細胞の役割 (2018)
  • Author(s): 渡辺すみ子
  • Organizer: Retina Research Forum
  • Invited
• [Presentation] Divergence and convergence in the evolution of Drosophila neo-sex chromosomes (2018)
  • Author(s): Nozawa, Masafumi
  • Organizer: Special Symposium To Celebrate Over 50,000 Citations Of Saitou & Nei's (1987) Neighbor-Joining Method Paper
  • Invited
• [Presentation] Metagenome informatics to understand microbial communities (2018)
  • Author(s): 森宙史
  • Organizer: イルミナマイクロバイオロジーワークショップ2018
  • Invited
• [Presentation] ショウジョウバエにおける新規トランスポゾン制御因子の同定と機能解明 (2018)
  • Author(s): 齋藤都暁
  • Organizer: 日本分子生物学会
  • Invited
• [Presentation] マウス生殖細胞の性分化を制御するシグナル系 (2018)
  • Author(s): 相賀 裕美子
  • Organizer: 日本分子生物学会
  • Invited
• [Presentation] Epidermal stem cell dynamics during pregnancy (2018)
  • Author(s): 豊島文子
  • Organizer: 分子生物学会
  • Invited
• [Presentation] ストレス抵抗における長鎖ノンコーディングRNAの機能に関する研究 (2018)
  • Author(s): 秋光信佳
  • Organizer: 放射線若手の会
  • Invited
• [Presentation] Plant mobile domainを介した新規サイレンシング機構 (2018)
  • Author(s): 池田陽子
  • Organizer: 遺伝研研究会「転移因子と宿主の相互作用による生命機能と進化」
  • Invited
• [Presentation] 変異解析に基づくマウス参照配列の検証とほ乳類ゲノム多様性維持の戦略 (2018)
  • Author(s): 権藤洋一
  • Organizer: 基礎放射線医学セミナー
  • Invited
• [Presentation] Metabolic regulation of RNA modification associated with human disease (2018)
  • Author(s): Tsutomu Suzuki
  • Organizer: 熊大発生医学研HIGOセミナー
  • Invited
• [Presentation] 世界のトウガラシ類の持つ多様な形質と新しい利用の視点 (2018)
  • Author(s): 細川宗孝
  • Organizer: 公開シンポジウム トウガラシ類の国産化を目指して -鹿児島県におけるトウガラシ類の生産と商品開発の取り組み-
  • Invited
• [Presentation] ナミテントウの斑紋形成遺伝子の同定 (2018)
  • Author(s): 新美輝幸
  • Organizer: 甲南大学「博学プロジェクト」セミナー
  • Invited
• [Presentation] ゲノム解析へのグラフ構造の応用 ～ゲノムグラフの今～ (2018)
  • Author(s): 笠原 雅弘
  • Organizer: 生命医薬情報学連合大会(IIBMP2018)
  • Invited
• [Presentation] 進歩が著しいマイクロバイオームおよび微生物ゲノム研究法 (2018)
  • Author(s): 高橋 弘喜
  • Organizer: 第117回日本皮膚科学会総会
  • Invited
• [Presentation] 転写因子IRF8による単核貪食細胞分化のエピジェネティック制御 (2018)
  • Author(s): 黒滝 大翼, 中林 潤, 川瀬 航, 西山 晃, 田村 智彦
  • Organizer: 第14回 麒麟塾
  • Invited
• [Presentation] A small molecule reveals novel post-translational regulation of plant circadian clock (2018)
  • Author(s): 中道範人
  • Organizer: 第25回時間生物学会学術大会
  • Invited
• [Presentation] 脳を創る神経幹細胞 (2018)
  • Author(s): 後藤由季子
  • Organizer: 第26回「脳の世紀」シンポジウム「AIと脳」
  • Invited
• [Presentation] 超解像イメージングによって明らかになった生細胞のゲノムの折り畳み構記造とそのダイナミクス (2018)
  • Author(s): 前島一博
  • Organizer: 第31回腫瘍病理セミナー・北信がんプロFD講演会
  • Invited
• [Presentation] 個体発生における生殖細胞系列突然変異の起因とその分子機構仮説 (2018)
  • Author(s): 権藤洋一
  • Organizer: 第36回基礎医学系懇談会
  • Invited
• [Presentation] LGP2-TRBP相互作用により制御されるmicroRNAの同定と、そのターゲット遺伝子の網羅的発現解析 (2018)
  • Author(s): 中野悠子、髙橋朋子、尾野本浩司、村上文則、鈴木穣、米山光俊、程久美子
  • Organizer: 第41回日本分子生物学会
  • Invited
• [Presentation] ウイルス感染により細胞内ウイルスセンサーはサイレンシングを介して遺伝子発現ネットワークを制御する (2018)
  • Author(s): 髙橋朋子、中野悠子、尾野本浩司、米山光俊、程久美子
  • Organizer: 第41回日本分子生物学会
  • Invited
• [Presentation] 経発生におけるペリセントロメア領域の役割 (2018)
  • Author(s): 岸雄介、木下隆太、後藤由季子
  • Organizer: 第41回日本分子生物学会年会
  • Invited
• [Presentation] マウス生殖細胞系列突然変異の起源とほ乳類における遺伝的多様性維持機構 (2018)
  • Author(s): 権藤洋一
  • Organizer: 第41回日本分子生物学会年会
  • Invited
• [Presentation] 神経発生におけるペリセントロメア領域の役割 (2018)
  • Author(s): 岸雄介、木下隆太、後藤由季子
  • Organizer: 第41回日本分子生物学会年会
  • Invited
• [Presentation] マウス生殖系列で発生するde novo変異から見る哺乳類ゲノムの進化 (2018)
  • Author(s): 内村有邦、樋口真弓、水口洋平、松本拡高、若山清香、若山照彦、佐藤康成、福村龍太郎、辻隆弘、今中正明、中本芳子、三浦昭子、権藤洋一、豊田敦、八木健
  • Organizer: 第41回日本分子生物学会年会
  • Invited
• [Presentation] 細胞の中のクロマチンの動きを見る (2018)
  • Author(s): 前島一博
  • Organizer: 第41回分子生物学会フォーラム 認定特定非営利活動法人 綜合画像研究支援 NPO IIRS
  • Invited
• [Presentation] Correlation analysis of single nucleosome dynamics reveals compact chromatin domain organization in living cells (2018)
  • Author(s): Kazuhiro Maeshima
  • Organizer: 第41回分子生物学会ワークショップ2AW-08 液体相分離による細胞構造アーキテクチュア
  • Invited
• [Presentation] ゲノム科学的視点から見るDNAポリメラーゼ機能の柔軟性 (2018)
  • Author(s): 大学保一
  • Organizer: 第41回分子生物学会年会
  • Invited
• [Presentation] 超解像イメージングによって明らかになった生細胞のクロマチン構造とそのダイナミクス (2018)
  • Author(s): 前島一博
  • Organizer: 第5回北陸エピジェネティクス研究会
  • Invited
• [Presentation] 核内長鎖ノンコーディングRNAの分解制御を通じた病原体抵抗機構 (2018)
  • Author(s): 秋光信佳
  • Organizer: 第69回日本細胞生物学会大会
  • Invited
• [Presentation] プレ・プロバイオティクス研究から腸内細菌叢と宿主のクロストークを理解する (2018)
  • Author(s): 園山 慶
  • Organizer: 第75回日本栄養・食糧学会中部支部大会特別講演
  • Invited
• [Presentation] ゼブラフィッシュにおけるトランスポゾンを用いたゲノムワイド遺伝子トラップスクリーンと脳機能研究への応用 (2018)
  • Author(s): 川上浩一
  • Organizer: 第91回日本生化学会大会
  • Invited
• [Presentation] 網膜形成におけるNmnatlの機能解析 (2018)
  • Author(s): 栗林寛、渡辺すみ子
  • Organizer: 第91回日本生化学会大会 ワークショップ-網膜科学がつなぐ生化学と感覚生理機能
  • Invited
• [Presentation] 超解像イメージングによって明らかになった生細胞におけるクロマチンの構造とそのダイナミクス (2018)
  • Author(s): 前島一博
  • Organizer: 第91回日本生化学会大会シンポジウム
  • Invited
• [Presentation] RNA修飾によるエピトランスクリプトーム制御と疾患 (2018)
  • Author(s): 鈴木 勉
  • Organizer: 東京医科歯科大学セミナー
  • Invited
• [Presentation] 性染色体の進化-ショウジョウバエを例にー (2018)
  • Author(s): 野澤昌文
  • Organizer: 東京大学水産実験所セミナー
  • Invited
• [Presentation] ショウジョウバエを用いて性染色体進化の謎に迫る (2018)
  • Author(s): 野澤昌文
  • Organizer: 東京都健康安全研究センター技術懇話会
  • Invited
• [Presentation] マウスにおける自然突然変異のゲノムワイド解析 (2018)
  • Author(s): 権藤洋一
  • Organizer: 日本遺伝学会第90回大会
  • Invited
• [Presentation] RNA修飾によるエピトランスクリプトーム制御と疾患 (2018)
  • Author(s): 鈴木 勉
  • Organizer: 日本筋学会第4回学術集会
  • Invited
• [Presentation] 性決定遺伝子で探るカプトムシの角形成 (2018)
  • Author(s): 新美輝幸・森田慎一
  • Organizer: 日本昆虫学会第78回大会
  • Invited
• [Presentation] シャジクモ藻類ヒメミカヅキモのモデル植物化 (2018)
  • Author(s): 関本弘之
  • Organizer: 日本植物学会第82回大会シンポジウム「新規モデル植物を作ろう : ゲノム解読と形質転換系の確立」
  • Invited
• [Presentation] Memory-related activity-regulated transcripts revealed by single cell RNA-Seq analysis (2018)
  • Author(s): Okuno H
  • Organizer: 日本神経化学会大会
  • Invited
• [Presentation] 大規模ゲノム進化研究のためのデータベース・ソフトウェア (2018)
  • Author(s): 岩崎渉
  • Organizer: 日本進化学会第20回大会
  • Invited
• [Presentation] ゼブラフィッシュの遺伝学 (2018)
  • Author(s): 川上浩一
  • Organizer: 日本人類遺伝学会第63回大会
  • Invited
• [Presentation] テントウムシの斑紋パターンを制御する遺伝子の同定 (2018)
  • Author(s): 安藤俊哉・新美輝幸
  • Organizer: 日本動物学会 第89回大会
  • Invited
• [Presentation] トンボの体色形成メカニズムと環境適応 (2018)
  • Author(s): 二橋亮
  • Organizer: 日本動物学会関東支部公開講演会.
  • Invited
• [Presentation] ゲノム解析新技術 : ロングリード解析とシングルセル解析 (2018)
  • Author(s): 鈴木穣
  • Organizer: 日本内分泌学会
  • Invited
• [Presentation] Toward understanding the molecular mechanism of sexual fate decision in murine germ cells (2018)
  • Author(s): 相賀 裕美子
  • Organizer: 日本発生生物学会年会
  • Invited
• [Presentation] ジェネラリストが駆動する微生物の分散と進化 (2018)
  • Author(s): 岩崎渉
  • Organizer: 日本微生物生態学会第32回大会
  • Invited
• [Presentation] がん細胞株のシングルセル解析 : 複数プラットフォーム間の横断解析 (2018)
  • Author(s): 鈴木穣
  • Organizer: 日本分子腫瘍マーカー研究会
  • Invited
• [Presentation] ステロイド代謝酵素多型によるプリ属の遺伝的性決定機構 (2018)
  • Author(s): 小山喬・中本正俊・森島輝・山下量平・山下雄史・佐々木皓平・水野直樹・車遥介・鈴木萌・家田梨櫻・内野翼・田角聡志・細谷将・宇野誠一・小山次朗・豊田敦・菊池潔・坂本 崇
  • Organizer: 日本分子生物学会 第41回日本分子生物学会年会
  • Invited
• [Presentation] 精原細胞期と成熟卵母細胞期のマウス生殖細胞への放射線照射は子どものゲノムに小さなサイズの欠失とマルチサイト変異を誘発する (2018)
  • Author(s): 佐藤康成、Kuo Tony、瀬々潤、西村まゆみ、島田義也、中村典、内村有邦
  • Organizer: 日本放射線影響学会第61回大会
  • Invited
• [Presentation] 胃のマイクロバイオームに関する検討 (2018)
  • Author(s): 山岡吉生
  • Organizer: 平成30年度(第50回)九州微生物研究会総会
  • Invited
• [Presentation] 微量変異原評価を可能とする自然発生変異の高精度検出系の開発と現状 (2018)
  • Author(s): 権藤洋一
  • Organizer: 放射線影響研究のパラダイムシフトポストLNTモデルの構築準備会
  • Invited
• [Presentation] 神経幹細胞の運命制御 (2018)
  • Author(s): 後藤 由季子
  • Organizer: 名古屋大学 IGER NSIセミナー
  • Invited
• [Presentation] クライオ電子顕微鏡、X線散乱、超解像蛍光顕微鏡で明らかになったクロマチンの構造とダイナミクス (2018)
  • Author(s): 前島一博
  • Organizer: 量子生命科学研究会 第2回学術集会・基調講演
  • Invited
• [Presentation] 非病原性Rhizobium vitis VAR03-1株によるブドウ根頭がんしゅ病の病原性関連遺伝子の発現抑制機構の解析 (2018)
  • Author(s): 石井智也・渡邉恵・齊藤晶・松井英譲・山本幹博・一瀬勇規・豊田和弘・川口章・能年義輝
  • Organizer: H30年度日本植物病理学会関西部会
• [Presentation] 非病原性Rhizobium vitis VAR03-1株によるブドウ根頭がんしゅ病の病原性関連遺伝子の発現抑制機構の解析 (2018)
  • Author(s): 石井智也・渡邉恵・齊藤晶・松井英讓・山本幹博・一瀬勇規・豊田和弘・川口章・能年義輝
  • Organizer: 第53回植物感染生理談話会
• [Presentation] ゼニゴケ・珪藻のゲノム解析支援 : ゲノムアセンブリからデータベース公開まで (2018)
  • Author(s): 望月孝子、谷沢靖洋、中村保一
  • Organizer: 第1回 植物インフォマティックス研究会
• [Presentation] NBDCヒトデータベースにおけるヒト由来情報の共有 (2018)
  • Author(s): 川嶋実苗
  • Organizer: Japan Open Science Summit
• [Presentation] A hijack strategy of a parasitoid wasps on Drosophila larvae : A characteristic apoptosis in imaginal discs (2018)
  • Author(s): Minami Katayama, Takayoshi Kuwabara, Ryusuke Niwa, Yuko Shimada
  • Organizer: Japanese Drosophila Research Conference 13
• [Presentation] Roles of a transcription factor 19A in the osteoblast development of sternum (2018)
  • Author(s): Mao Kuriki, Fuminori Sato, Kenta Sumiyama, Koichi Kawakami, Atsuko Sehara-Fujisawa
  • Organizer: Joint Annual Meeting of JSDB 51st and JSCB 70th
• [Presentation] Metabolic control of skeletal muscle regeneration (2018)
  • Author(s): Shimpei Hori, Fuminori Sato, Atsuko Sehara-Fujisawa
  • Organizer: Joint Annual Meeting of JSDB 51st and JSCB 70th
• [Presentation] トドマツ連鎖地図構築に有用なEST-SSRマーカーの開発 (2018)
  • Author(s): 後藤 晋・内山憲太郎・上野真義・石塚 航・北村系子
  • Organizer: 森林遺伝育種学会
• [Presentation] 発現遺伝子情報を用いたトドマツの環境適応候補遺伝子のマッピング (2018)
  • Author(s): 内山憲太郎・上野真義・森 英樹・後藤 晋
  • Organizer: 森林遺伝育種学会
• [Presentation] 幹細胞化関連遺伝子を過剰発現するオオムギカルスにおける網羅的遺伝子発現解析 (2018)
  • Author(s): 久野裕・宗森広美・関真秀・鈴木穣・佐藤和広
  • Organizer: 第10回中国地域育種談話会
• [Presentation] 幹細胞化関連遺伝子を過剰発現する形質転換オオムギカルスにおいて発現変動する遺伝子の検出 (2018)
  • Author(s): 久野裕・宗森広美・関真秀・鈴木穣・佐藤和広
  • Organizer: 第13回ムギ類研究会
• [Presentation] Neuron-specific histone modification analysis of Alzheimer's diseae brain (2018)
  • Author(s): 岩田淳
  • Organizer: 第37回日本認知症学会
• [Presentation] Ground stateにおけるマウスES細胞の不均一性の同定 (2018)
  • Author(s): 堀江恭二
  • Organizer: 第41回日本分子生物学会年会
• [Presentation] Identification of potential regulatory mutations using multi-omics analysis and haplotyping of LUAD cell lines (2018)
  • Author(s): Sarun Sereewattanawoot, Ayako Suzuki, Masahide Seki, Takashi Kohno, Katsuya Tsuchihara & Yutaka Suzuki
  • Organizer: 第77回 日本癌学会学術総会
• [Presentation] Patient-specific circulating tumor DNA monitoring using digital PCR in esophageal squamous cell cancer patients. (2018)
  • Author(s): Takeshi Iwaya, Fumitaka Endo, Yasushi Sasaki, Mizunori Yaegashi, Kei Sato, Noriyuki Sasaki, Yuji Akiyama, Akira Sasaki, Mari Masuda, Takashi Tokino, Satoshi Nishizuka
  • Organizer: 第77回日本癌学会学術総会
• [Presentation] Analysis of a mechanism that initiates stemness in inflammation-driven gastric cancer cells (2018)
  • Author(s): 村上和弘, 寺門侑美, Nick Barker
  • Organizer: 第77回 日本癌学会学術総会
• [Presentation] 単核貪食細胞系におけるIrf8の発現に重要な新規エンハンサー領域の同定 (2018)
  • Author(s): 佐々木 悠, 西山 晃, 黒滝 大翼, 関田 洋一, 木村 透, 田村 智彦
  • Organizer: 第80回 日本血液学会学術集会
• [Presentation] RNA-seq及び相同性検索を用いた真核生物用ゲノムアノテーションパイプライン (2018)
  • Author(s): 福多賢太郎、近藤伸二、野口英樹
  • Organizer: 第41回日本分子生物学会年会
• [Presentation] k-mer頻度を用いて反復配列を検出する手法の開発 (2018)
  • Author(s): 宮澤秀幸、福多賢太郎、野口英樹
  • Organizer: 第41回日本分子生物学会年会
• [Presentation] 真核生物ゲノムにおける高汎用ab initio遺伝子予測アルゴリズムの開発 (2018)
  • Author(s): 寺内真、野口英樹
  • Organizer: 第41回日本分子生物学会年会
• [Presentation] Clinical-genotype correlation analysis enables prediction of functional prognosis in Japanese NF2 patients (2018)
  • Author(s): 寺西裕, 宮脇哲, 本郷博貴, 堂福翔吾, 岡野淳, 高柳俊作, 中冨浩文, 斉藤延人
  • Organizer: 日本人類遺伝学会 第63回大会
• [Presentation] 神経線維腫症2型(NF2)関連聴神経腫瘍に伴う長期聴力予後成績と遺伝子解析に基づいた聴力予後予測 (2018)
  • Author(s): 寺西裕, 宮脇哲, 本郷博貴, 堂福翔吾, 岡野淳, 高柳俊作, 中冨浩文, 斉藤延人
  • Organizer: 日本脳神経外科学会 第77回学術総会
• [Presentation] NBDCヒトデータベースと『TogoVar』人類遺伝学研究への貢献を目指して (2018)
  • Author(s): 三橋信孝、豊岡理人
  • Organizer: 日本人類遺伝学会
• [Presentation] 発熱植物ザゼンソウの肉穂花序におけるトランスクリプトーム解析 (2018)
  • Author(s): 谷本 悠, 梅川 結, 伊藤 菊一
  • Organizer: 日本生化学会東北支部 第84回例会・シンポジウム
• [Presentation] Essential role of the expression network between two RNA-binding proteins in the formation of sustainable primordial follicles (2018)
  • Author(s): 加藤 譲、相賀 裕美子
  • Organizer: 日本分子生物学会
• [Presentation] NBDCにおけるヒト由来データの共有と利活用促進のための活動 (2018)
  • Author(s): 川嶋実苗
  • Organizer: 日本分子生物学会
• [Presentation] ナノポアシークエンスを用いた肺がんのスプライシング異常の解析 (2018)
  • Author(s): 許 柳、関 真秀、鈴木 穣
  • Organizer: 日本分子生物学会年会
• [Presentation] ナノポアシークエンサーを用いたがんゲノム解析 (2018)
  • Author(s): 坂本 祥駿、関 真秀、若栗 浩幸、鈴木 絢子、鈴木 穣
  • Organizer: 日本分子生物学会年会
• [Presentation] 「セミバルク」RNA-Seq解析を用いた細胞微小環境の解析 (2018)
  • Author(s): 土屋 一成、永澤 慧、関 真秀、久世 裕太、鈴木 穣
  • Organizer: 日本分子生物学会年会
• [Presentation] Capsicum属の種間交雑不和合性を引き起こすエピスタシス遺伝子の座乗染色体の特定 (2018)
  • Author(s): 梅林綾香、白澤健太、安井康夫、山崎 彬、細川宗孝
  • Organizer: 平成30年度園芸学会近畿支部
• [Presentation] 人工重力発生装置を用いたゼブラフィッシュ宇宙滞在実験 (2018)
  • Author(s): 佐藤文規, Choi Minyong, 王梓, 今村聖実, 堀内映美, 呉泉, 藤田生水, 内田智子, 加藤充康, 谷垣文章, 東端晃, 村谷匡史, 小林純也, 髙橋昭久, 菅野純夫, 松崎文雄, 鈴木穣, 川上浩一, 瀬原淳子
  • Organizer: 宇宙生物科学会第32回大会
• [Presentation] トウガラシ(Capsicum chinense)の高温期における着果率に関わる遺伝子の探索 (2018)
  • Author(s): 山崎 彬、白澤健太、細川宗孝
  • Organizer: 園芸学会平成30年度秋季大会
• [Presentation] ハクサイにおける全ゲノムメチル化解析 (2018)
  • Author(s): 藤本 龍 ; 高橋 聡史 ; 鈴木 穣 ; 関 原明 ; 安田 剛志
  • Organizer: 園芸学会平成31年度春季大会
• [Presentation] Optimization of a metabarcoding method for a major group of giant viruses in the environment. Workshop on Environmental Viruses (2018)
  • Author(s): Prodinger F., Yanze L., Morimoto D., Omae K., Tominaga K., Gotoh Y., Takano Y., Nagasaki K., Hingamp P., Endo H., Yoshida T., Ogata H.
  • Organizer: 環境ウイルス研究集会2018
• [Presentation] 集団トランスクリプトミクスによる分布制限要因の解明 (2018)
  • Author(s): 玉川克典・吉田琴音・髙橋佑磨
  • Organizer: 個体群生態学会
• [Presentation] トウガラシCapsicum chinenseのF1雑種形成による高温ストレス下での着果率の改善に関わる遺伝子の探索 (2018)
  • Author(s): 山崎 彬、白澤健太、細川宗孝
  • Organizer: 公開シンポジウム トウガラシ類の国産化を目指して -鹿児島県におけるトウガラシ類の生産と商品開発の取り組み-
• [Presentation] 脳腫瘍形成におけるミクログリアの役割の解析 (2018)
  • Author(s): 髙祖 秀登
  • Organizer: 次世代脳プロジェクト 冬のシンポジウム
• [Presentation] 慢性炎症関連因子Angiopoietin-like protein 2の脈絡叢における機能解析 (2018)
  • Author(s): 山下りえ 中島欽一 堅田明子
  • Organizer: 次世代脳プロジェクト冬のシンポジウム
• [Presentation] Genome-wide Kinetic Analysis of Pre-mRNA Processing in Living Animals (2018)
  • Author(s): 渡部栄地, 黒柳秀人
  • Organizer: 線虫研究の未来を創る会
• [Presentation] ADAR1によるRNA編集を介した自己免疫制御機構 (2018)
  • Author(s): 中濱泰祐
  • Organizer: 第11回若手フォーラム
• [Presentation] ゲノム時代における統計遺伝学と量的遺伝学 (2018)
  • Author(s): 権藤洋一
  • Organizer: 第12回生物学基礎論研究会
• [Presentation] バキュロウイルス感染細胞におけるシャットオフを逃れる遺伝子の網羅的解析 (2018)
  • Author(s): 疋田弘之・庄司佳祐・川本宗孝・鈴木穣・嶋田透・勝間進
  • Organizer: 第13回昆虫病理研究会シンポジウム
• [Presentation] HIV-1感染ヒト化マウスにおける1細胞網羅的遺伝子発現解析 (2018)
  • Author(s): 麻生啓文, 伊東潤平, 鈴木穣, 佐藤佳, 小柳義夫
  • Organizer: 第15回ウイルス学キャンプ
• [Presentation] 生体内のHIV-1複製におけるエピジェネティックネットワークの解明 (2018)
  • Author(s): 長岡峻平, 川上英良, 伊東潤平, 三沢尚子, 麻生啓文, 中岡慎治, 佐藤賢文, 城口克之, 小柳義夫, 佐藤佳
  • Organizer: 第15回ウイルス学キャンプ
• [Presentation] Phenotype-genotype correlationをベースにした神経線維腫症2型患者の機能予後予測 (2018)
  • Author(s): 寺西裕, 宮脇哲, 本郷博貴, 堂福翔吾, 岡野淳, 高柳俊作, 中冨浩文, 斉藤延人
  • Organizer: 第19回日本分子脳神経外科学会
• [Presentation] 細胞内ウイルスセンサーLGP2はTRBPとの相互作用を介してRNAサイレンシングを制御する (2018)
  • Author(s): 髙橋朋子、中野悠子、尾野本浩司、米山光俊、程久美子
  • Organizer: 第20回日本RNA学会年会
• [Presentation] 鉄代謝を制御する転写後調節機構の解明 (2018)
  • Author(s): 吉永正憲, 三野享史, Bassik, M. C., 竹内理
  • Organizer: 第20回日本RNA学会年会
• [Presentation] SMG1はRegnase-1経路を介して炎症性mRNAを制御する (2018)
  • Author(s): 三野享史, 岩井紀貴, 赤木宏太朗, 山下暁朗, 竹内 理
  • Organizer: 第20回日本RNA学会年会
• [Presentation] 先進的RNA-seqのデータ解析を改善するマッピングパラメータ学習 (2018)
  • Author(s): 岩切淳一, Martin C. Frith, 浜田道昭, 浅井潔
  • Organizer: 第20回日本RNA学会年会
• [Presentation] 核内ストレス体によるストレス回復期のスプライシング制御 (2018)
  • Author(s): 二宮賢介, 足達俊吾, 夏目徹, 岩切淳一, 寺井悟朗, 浅井潔, 廣瀬哲郎
  • Organizer: 第20回日本RNA学会年会
• [Presentation] ショウジョウバエNeo性染色体を用いた大野(1967)の遺伝子量補償仮説の再検証 (2018)
  • Author(s): 野澤昌文
  • Organizer: 第20回日本進化学会
• [Presentation] 有翅昆虫と無翅昆虫の発生比較から探る翅の進化的起源 (2018)
  • Author(s): 大出高弘、三戸太郎、新美輝幸
  • Organizer: 第20回日本進化学会大会
• [Presentation] オニヒトデから見つかった謎の共在菌について (2018)
  • Author(s): 和田直久, 湯淺英知, 梶谷嶺, 後藤恭弘, 小椋義俊, 吉村大, 豊田敦, Sen-Lin TANG, 東村幸浩, Hugh SWEATMAN, Zac FORSMAN, Omri BRONSTEIN, Gal EYAL, Nalinee THONGTHAM, 林哲也, 伊藤武彦, 安田仁奈
  • Organizer: 第21回日本サンゴ礁学会
• [Presentation] インドー太平洋のオニヒトデから見つかった未知の菌のゲノム解析 (2018)
  • Author(s): 湯淺 英知, 梶谷 嶺, 後藤 恭宏, 和田 直久, 吉村 大, 小椋 義俊, 林 哲也, 安田仁奈, 伊藤 武彦
  • Organizer: 第21回日本サンゴ礁学会
• [Presentation] 遠位エンハンサーとプロモーターの段階的相互活性化が血球分化における系譜特異的遺伝子の発現を導く (2018)
  • Author(s): 西山 晃, 藩 龍馬, 伏見 健太郎, 堤 修一, 中林 潤, 黒滝 大翼, 油谷浩幸, 田村 智彦
  • Organizer: 第22回 造血器腫瘍研究会
• [Presentation] 冠動脈疾患と心不全における心臓腸管連関 (2018)
  • Author(s): 山下 智也、林 友鴻、平田 健一
  • Organizer: 第22回日本心不全学会学術集会
• [Presentation] 遺伝子解析結果をベースにした神経線維腫症2型患者(NF2)の機能予後予測 (2018)
  • Author(s): 寺西裕, 宮脇哲, 本郷博貴, 堂福翔吾, 岡野淳, 高柳俊作, 中冨浩文, 斉藤延人
  • Organizer: 第23回日本脳腫瘍の外科学会
• [Presentation] 神経線維腫症2型の遺伝的背景解明に向けた取り組み(変異遺伝子解析および臨床関連解析) (2018)
  • Author(s): 寺西裕, 宮脇哲, 本郷博貴, 堂福翔吾, 岡野淳, 高柳俊作, 中冨浩文, 斉藤延人
  • Organizer: 第24回 家族性腫瘍学会
• [Presentation] HIV治癒へのオミクス解析 (2018)
  • Author(s): 佐藤佳, 三沢尚子, 長岡俊平, 麻生啓文, 川上英良, 中岡慎治, 城口克之, 佐藤賢文, 小柳義夫.
  • Organizer: 第32回日本エイズ学会学術集会・総会
• [Presentation] 節足動物における性決定遺伝子doublesexの分子進化の理解に向けて. (2018)
  • Author(s): 千頭康彦・新美輝幸
  • Organizer: 第39回 菅平動物学セミナー
• [Presentation] Stepwise and mutual activation of enhancers and promoters during cell differentiation (2018)
  • Author(s): Nishiyama A, Ban T, Fushimi K, Nakabayashi J, Kurotaki D, Tamura T
  • Organizer: 第41回 日本分子生物学会年会
• [Presentation] The nutritional basis of Drosophila associated microbes for larval growth (2018)
  • Author(s): 牟禮あゆみ
  • Organizer: 第41回日本分子生物学会年会
• [Presentation] Y染色体リピート配列を巻き込んだ染色体構造異常症の次世代シーケンサーを用いた解析 (2018)
  • Author(s): 稲垣秀人、加藤武馬、豊田 敦、蒔田 芳男、倉橋浩樹
  • Organizer: 第41回日本分子生物学会年会
• [Presentation] ゼブラフィッシュ宇宙滞在実験から微小重力の骨格筋への影響とそのメカニズムを探る Exploring the effect of microgravity on skeletal muscle and its mechanism from the space experiment using zebrafish (2018)
  • Author(s): 佐藤文規、Choi Minyong、王梓、今村聖実、堀内映美、呉 泉、藤田 生水、内田智子、加藤 充康、谷垣文章、東端 晃、村谷匡史、小林純也、髙橋昭久、菅野純夫、松崎 文雄、鈴木穣、川上浩一、瀬原淳子
  • Organizer: 第41回日本分子生物学会年会
• [Presentation] 動物個体におけるmRNA前駆体プロセシング動態の解析 (2018)
  • Author(s): 渡部栄地, 黒柳秀人
  • Organizer: 第41回日本分子生物学会年会
• [Presentation] Regnase-1は鉄代謝関連のmRNAを分解することで鉄恒常性を維持する (2018)
  • Author(s): 吉永正憲, 三野享史, 竹内理
  • Organizer: 第41回日本分子生物学会年会
• [Presentation] hnRNP KのRNA結合モチーフはAIDによる免疫グロブリン遺伝子多様化に必須である (2018)
  • Author(s): Ziwei Yin, Maki Kobayashi, Wenjun Hu, Nasim A. Begum, Tasuku Honjo
  • Organizer: 第41回日本分子生物学会年会
• [Presentation] トランスオミクスを用いたバキュロウイルス感染細胞におけるシャットオフ回避遺伝子の機能解析 (2018)
  • Author(s): 疋田弘之・庄司佳祐・川本宗孝・鈴木穣・嶋田透・勝間進
  • Organizer: 第41回日本分子生物学会年会
• [Presentation] 網羅的遺伝子構造予測自動アノテーションパイプラインの開発 (2018)
  • Author(s): 篠田恭寛, 梶谷嶺, 小林史弥, 高橋和希, 中村優太, 湯淺英知, 伊藤武彦
  • Organizer: 第41回日本分子生物学会年会
• [Presentation] Y染色体をもたないアマミトゲネズミの遺伝子配列を用いた進化学的解析 (2018)
  • Author(s): 岡野真佑, 奥野未来, 梶谷嶺, 黒岩麻里, 伊藤武彦
  • Organizer: 第41回日本分子生物学会年会
• [Presentation] 口腔扁平上皮癌のhotspot変異解析 (2018)
  • Author(s): 佐々木泰史、中垣貴文、田村みゆき、井戸川雅史、荻和弘、平塚博義、時野隆至
  • Organizer: 第41回日本分子生物学会年会
• [Presentation] ザゼンソウの熱産生組織における遺伝子発現プロファイリング (2018)
  • Author(s): 谷本 悠、梅川 結、伊藤 菊一
  • Organizer: 第41回日本分子生物学会年会
• [Presentation] ザゼンソウの熱産生組織で発現する複数のチオレドキシンレダクターゼ遺伝子 (2018)
  • Author(s): 樋口 リサ、梅川 結、伊藤 菊一
  • Organizer: 第41回日本分子生物学会年会
• [Presentation] マウスモデルを用いた放射線の次世代遺伝影響のゲノムワイド解析 (2018)
  • Author(s): 佐藤康成、Kuo Tony、瀬々潤、西村まゆみ、島田義也、内村有邦
  • Organizer: 第43回中国地区放射線影響研究会
• [Presentation] 骨格筋維持における重力の役割-ゼブラフィッシュの宇宙滞在から学ぶ事 Roles of the gravity in the maintenance of skeletal muscle - what we can learn from space stay of zebrafish (2018)
  • Author(s): 瀬原 淳子
  • Organizer: 第56回日本生物物理学会年会
• [Presentation] Characterization of HIV-1 infected cells in vivo by multi-omics analysis. (2018)
  • Author(s): Shumpei Nagaoka, Eiryo Kawakami, Jumpei Ito, Naoko Misawa, Hirofumi Aso, Shinji Nakaoka, Yorifumi Satou, Katsuyuki Shiroguchi, Yoshio Koyanagi, Kei Sato.
  • Organizer: 第66回日本ウイルス学会学術集会
• [Presentation] Systematic investigation of transcriptional regulations of interferon-stimulated genes. (2018)
  • Author(s): Hirofumi Aso, Jumpei Ito, Yoshio Koyanagi, Kei Sato
  • Organizer: 第66回日本ウイルス学会学術集会
• [Presentation] Regnase-1による炎症性mRNA分解機構 (2018)
  • Author(s): 三野享史
  • Organizer: 第6回CCR4-NOT研究会
• [Presentation] 北海道船泊遺跡の高深度縄文人ゲノムから (2018)
  • Author(s): 神澤秀明
  • Organizer: 第72回日本人類学会大会
• [Presentation] Spontaneous development of intratumoral heterogeneity in a transposon-induced mouse model of glioma (2018)
  • Author(s): 高祖 秀登
  • Organizer: 第77回日本癌学会学術総会
• [Presentation] マウスモデルに基づく胚発生の極初期に個体発がんドライバー変異が生じる可能性の示唆 (2018)
  • Author(s): 権藤洋一、木村穣
  • Organizer: 第77回日本癌学会学術総会
• [Presentation] 患者由来大腸がんオルガノイドを用いた転移モデルマウス (2018)
  • Author(s): 岡本 拓也, 八尾 良司, 柳沼 克幸, 長山 聡
  • Organizer: 第77回日本癌学会学術総会
• [Presentation] 体細胞変異と遺伝的背景による大腸がん薬剤感受性制御機構 (2018)
  • Author(s): 八尾 良司, 小柳 潤, 長山 聡, 野田 哲生
  • Organizer: 第77回日本癌学会学術総会
• [Presentation] ショウジョウバエにおける性染色体化が遺伝子発現におよぼす影響 (2018)
  • Author(s): 野澤昌文
  • Organizer: 第90回日本遺伝学会
• [Presentation] 認知活動により活性化される前初期遺伝子Arc発現海馬神経細胞におけるスパイン形態解析およびトランスクリプトーム解析 (2018)
  • Author(s): 湊原 圭一郎, 鈴木 穣, 菅野 純夫, 尾藤 晴彦, 奥野 浩行
  • Organizer: 第91回日本生化学会大会
• [Presentation] Genome-Wide Kinetic Analysis of Pre-mRNA Processing in Living Animals (2018)
  • Author(s): 渡部栄地
  • Organizer: 東京地区線虫勉強会
• [Presentation] In-depth analysis of viral and host RNAs interacting with sever fever with thrombocytopenia syndrome virus (SFTSV) nucleoprotein N (2018)
  • Author(s): Keita Mizuma, Keita Matsuno, Masatoshi Okamatsu, Ayato Takada, Yoshihiro Sakoda
  • Organizer: 日本ウイルス学会北海道支部 平成30年度 夏季シンポジウム
• [Presentation] 分裂酵母の複製フォークの動態から見る複製開始反応の確率的現象 (2018)
  • Author(s): 大学保一
  • Organizer: 日本遺伝学会第90回大会
• [Presentation] マイクロフリューディクス技術を用いたゲノミクスート ドマツの標高に沿った環境適応の研究を例に (2018)
  • Author(s): 内山憲太郎・後藤 晋
  • Organizer: 日本育種学会 フリューダイム株式会社 ランチョンセミナー
• [Presentation] ホウレンソウの性染色体における組換え抑制領域の進化年代の推定 (2018)
  • Author(s): 岡崎 洋助, 平川 英樹, 鈴木 穣, 小野寺 康之
  • Organizer: 日本育種学会 第134回講演会
• [Presentation] Brassica rapaにおけるメチローム解析 (2018)
  • Author(s): 高橋 聡史 ; 長部 謙二 ; 宮路 直実 ; 鈴木 穣 ; 関 原明 ; 藤本 龍
  • Organizer: 日本育種学会第134回講演会
• [Presentation] Maintenance of breast cancer stem-like cells by cancer associated fibroblast-derived soluble factors (2018)
  • Author(s): 村山貴彦
  • Organizer: 日本癌学会
• [Presentation] 雌雄異株種・同株種ボルボックスの性染色体領域・相同領域における比較ゲノム解析 (2018)
  • Author(s): 山本荷葉子、浜地貴志、豊岡博子、新垣陽子、野口英樹、豊田敦、水口洋平、野崎久義
  • Organizer: 日本植物学会第82回大会
• [Presentation] ヒメミカヅキモの有性生殖進行に関わるRWP-RK遺伝子の解析 (2018)
  • Author(s): 平田優香、土金勇樹、西山智明、関本弘之
  • Organizer: 日本植物学会第82回大会
• [Presentation] ヒメミカヅキモのCpMinusl形質転換体の比較トランスクリプトーム解析 (2018)
  • Author(s): 露木奈津美、小宮あゆみ、大槻涼、西山智明、関本弘之
  • Organizer: 日本植物学会第82回大会
• [Presentation] 接合藻ヒメミカヅキモ種内系統間にみられるゲノム構造の変異 : 生殖様式の進化との関連 (2018)
  • Author(s): 川口也和子、土金勇樹、西山智明、関本弘之、土松隆志
  • Organizer: 日本植物学会第82回大会
• [Presentation] ホモタリック種ボルボックスの進化を比較ゲノム解析から探る (2018)
  • Author(s): 山本荷葉子、浜地貴志、豊岡博子、野口英樹、水口洋平、豊田敦、野崎久義
  • Organizer: 日本植物形態学会第30回大会
• [Presentation] 集団トランスクリプトミクスによるチリメンカワニナの汽水適応の検証 (2018)
  • Author(s): 玉川克典・高橋佑磨
  • Organizer: 日本進化学会
• [Presentation] 自然発生生殖細胞系列突然変異のほ乳類の発生段階における起源 (2018)
  • Author(s): 権藤洋一
  • Organizer: 日本人類遺伝学会第63回大会
• [Presentation] 遺伝子流動がもたらす遺伝的荷重と分布域制限 : 河川性巻貝の汽水域への進出 (2018)
  • Author(s): 玉川克典・吉田琴音・高橋佑磨
  • Organizer: 日本生態学会
• [Presentation] マダラシミ Thermobia domestica における性決定関連遺伝子 doublesex, transformer の遺伝子構造 (2018)
  • Author(s): 千頭康彦・新美輝幸
  • Organizer: 日本節足動物発生学会第54回大会
• [Presentation] Analysis of granulosa cell progenitor differentiation during primordial follicle formation in mice (2018)
  • Author(s): 福田 胡桃、加藤 譲、相賀 裕美子
  • Organizer: 日本発生生物学会年会
• [Presentation] To explore the feminizing genes mediated by SMAD4 in germ cell (2018)
  • Author(s): 島田 龍輝, 相賀 裕美子
  • Organizer: 日本発生生物学会年会
• [Presentation] セントロメア機能を制御するエピジェネティックメカニズム (2018)
  • Author(s): 堀 哲也
  • Organizer: 日本分子生物学会
• [Presentation] ネオセントロメアから迫るセントロメア領域における染色体構造の解析 (2018)
  • Author(s): 西村浩平
  • Organizer: 日本分子生物学会
• [Presentation] MCM10 maintains breast cancer stem-like cells through encouraging rapid response to replication stress (2018)
  • Author(s): 村山貴彦
  • Organizer: 日本分子生物学会
• [Presentation] マウスの生殖系列で発生する挿入欠失変異の発生頻度とその特徴 (2018)
  • Author(s): 内村有邦、樋口真弓、水口洋平、佐藤康成、辻隆弘、中本芳子、今中正明、三浦昭子、豊田敦、八木健
  • Organizer: 日本放射線影響学会第61回大会
• [Presentation] RNAseqによるバクテリア光応答の横断的解析 (2018)
  • Author(s): 高野英晃
  • Organizer: 平成30年度(2018年度) 遺伝研研究会～微生物生態から見えてくる新しい生理機能とその応用~
• [Presentation] 微重力環境下におけるゼプラフィッシュの行動解析及び、遺伝子発現変動解析 (2018)
  • Author(s): Choi Minyong, F Sato and A Sehara
  • Organizer: 平成30年度「宇宙に生きる」若手夏合宿
• [Presentation] カブトムシの角形成を制御する遺伝子群の同定 (2018)
  • Author(s): 森田慎一・安藤俊哉・前野哲輝・新美輝幸
  • Organizer: 平成30年度日本動物学会第89回大会
• [Book] カイコ実験単-カイコで生命科学をまるごと理解(「生物の科学・遺伝」・別册No.23) (2019)
  • Author(s): 藤原晴彦
  • Pages: 215
  • Total Pages: 303
  • Publisher: エヌティーエス
• [Book] Microbiota : Current Research and Emerging Trends (2019)
  • Author(s): Vo Phuoc Tuan, Boldbaatar Gantuya, Takashi Matsumoto and Yoshio Yamaoka
  • Pages: 99-122
  • Total Pages: 126
  • Publisher: Caister Academic Press
• [Book] 実験医学 関係ないと思っていませんか? 臨床研究法について知るべきこと (2019)
  • Author(s): 山本奈津子、川嶋実苗
  • Pages: 81-85
  • Total Pages: 144
  • Publisher: 羊土社
• [Book] “Single Molecule and Single Cell Sequencing”, Advances in Experimental Medicine (2019)
  • Author(s): Yutaka Suzuki (Editor)
  • Total Pages: 150
  • Publisher: Springer Singapore
• [Book] Single-Cell DNA-Seq and RNA-Seq in Cancer Using the C1 System. (2019)
  • Author(s): Seki M, Suzuki A, Sereewattanawoot S, Suzuki Y
  • Pages: 27-50
  • Total Pages: 150
  • Publisher: Springer Singapore
• [Book] An Informative Approach to Single-Cell Sequencing Analysis. (2019)
  • Author(s): Kashima Y, Suzuki A, Suzuki Y
  • Pages: 81-96
  • Total Pages: 150
  • Publisher: Springer Singapore
• [Book] 医学のあゆみ 腸内細菌と臨床医学 (2018)
  • Author(s): 山下智也、平田健一
  • Pages: 85-90
  • Total Pages: 125
  • Publisher: 医歯薬出版株式会社
• [Book] Minorities and Small Numbers from Molecules to Organisms in Biology (2018)
  • Author(s): Kazuhiro Maeshima
  • Pages: 53-58
  • Total Pages: 150
  • Publisher: Springer Nature Singapore Pte Ltd.
• [Book] The Allium Genome (2018)
  • Author(s): Hideki Hirakawa
  • Pages: 129-143
  • Total Pages: 217
  • Publisher: Springer
• [Book] The Allium Genome (2018)
  • Author(s): Go Suzuki, Turgut Yigit Akyol and Shusei Sato
  • Pages: 161-172
  • Total Pages: 217
  • Publisher: Springer
• [Book] Nutritional control of the germline development in Caenorhabditis elegans. In (2018)
  • Author(s): Masamitsu Fukuyama
  • Pages: 32
  • Total Pages: 789
  • Publisher: Springer Japan
• [Book] Encyclopedia of Bioinformatics and Computational Biology (2018)
  • Author(s): Junichi Iwakiri, Kiyoshi Asai
  • Total Pages: 3284(執筆ページ数 : 10)
  • Publisher: Elsevier
• [Book] よくわかるバイオインフォマティクス入門 (2018)
  • Author(s): 黒川顕, 森宙史, 東光一
  • Pages: 123-136
  • Total Pages: 208
  • Publisher: 講談社
• [Book] ゲノム医療における長鎖シーケンサー (2018)
  • Author(s): 森下真一
  • Total Pages: 243(執筆ページ数 : 5)
  • Publisher: 実験医学
• [Book] 臨床応用に向けた疾患シーケンス解析 (2018)
  • Author(s): 森下真一
  • Total Pages: 228(執筆ページ数 : 6)
  • Publisher: 遺伝子医学
• [Book] 生命科学データベース・ウェブツール 図解と動画で使い方がわかる! 研究がはかどる定番18 (2018)
  • Author(s): 矢倉勝
  • Pages: 68-72
  • Total Pages: 168
  • Publisher: MEDSi
• [Book] 実験医学増刊 (2018)
  • Author(s): 鹿島幸恵, 鈴木絢子, 関真秀, 鈴木穣
  • Pages: 2626-2630
  • Total Pages: 243
  • Publisher: 羊土社
• [Book] 医学の歩み (2018)
  • Author(s): 関真秀, 鈴木穣
  • Pages: 327-334
  • Total Pages: 120
  • Publisher: 医歯薬出版
• [Remarks] 領域ホームページ
  • URL: https://www.genome-sci.jp/
• [Remarks] DFASTバックグラウンドアノテーションエンジン
  • URL: https://github.com/nigyta/dfast_core
• [Remarks] minialign ロングリード向けアラインメントツール
  • URL: https://github.com/ocxtal/minialign
• [Remarks] libgaba 高速アラインメントライブラリ
  • URL: https://github.com/ocxtal/libgaba
• [Remarks] SonicParanoid 高速オルソログ同定プログラム
  • URL: http://iwasakilab.bs.s.u-tokyo.ac.jp/sonicparanoid/
• [Remarks] DEclust 複数サンプル間の発現差解析ツール
  • URL: http://www.dna.bio.keio.ac.jp/software/DEclust/
• [Remarks] COSMOS 染色体大規模構造変異高精度検出アルゴリズム
  • URL: http://seselab.org/cosmos/
• [Remarks] DFAST 微生物ゲノムアノテーションパイプライン
  • URL: https://dfast.nig.ac.jp/
• [Remarks] Sprai ロングリード向けシークエンシングエラー訂正・アセンブリパイプライン
  • URL: http://zombie.cb.k.u-tokyo.ac.jp/sprai/
• [Remarks] L-MiGAP 簡易型微生物ゲノムアノテーションパイプライン
  • URL: https://www.migap.org/
• [Remarks] VITCOMIC2 メタ16S・メタゲノム解析の系統組成推定・描画ツール
  • URL: http://vitcomic.org/
• [Remarks] Functree2.0 オミクスデータ可視化のためのwebアプリケーション
  • URL: https://bioviz.tokyo/functree/
• [Remarks] MarpolBase ゼニゴケゲノムデータベース
  • URL: http://marchantia.info/
• [Remarks] LncRRIdb IncRNA-RNA相互作用データベース
  • URL: http://rtools.cbrc.jp/LncRRIdb/
• [Remarks] DBTSS 転写開始点データベース
  • URL: https://dbtss.hgc.jp/
• [Remarks] DBKERO ゲノム多型・変異およびその周囲のオミクス情報をまとめたもの
  • URL: http://kero.hgc.jp/
• [Remarks] AgIn 1分子実時間シーケンシングからメチル化状態を推定するソフトウェア
  • URL: https://github.com/hacone/AgIn
• [Remarks] EAGLE 変異解析結果の信頼性を評価するソフトウェア
  • URL: https://github.com/tony-kuo/eagle
• [Remarks] Survival LAMP 統計解析ソフトウェア
  • URL: https://rtrelator.github.io/SurvivalLAMP/
• [Remarks] 遺伝子機能アノテーションのためのwebサーバー
  • URL: http://bioviz.tokyo/functree2
• [Remarks] CNNclust 非コードRNAクラスタリングツール
  • URL: http://www.dna.bio.keio.ac.jp/cnn/
• [Remarks] LEA Latent Environment Allocation
  • URL: http://leamicrobe.jp/
• [Remarks] MoMI-G グラフゲノムブラウザー
  • URL: https://github.com/MoMI-G/MoMI-G
• [Remarks] MarpolBase ゼニゴケゲノムDB :
  • URL: http://marchantia.info
• [Patent(Industrial Property Rights)] がんの診断のためのプローブ/プライマーライブラリー (2018)
  • Inventor(s): 西塚哲、岩谷岳
  • Industrial Property Rights Holder: 学校法人岩手医科大学
  • Industrial Property Rights Type: 特許
  • Industrial Property Number: 特願2018-143912
• [Funded Workshop] 「先進ゲノム支援」国際シンポジウム FRONTIERS OF GENOME SCIENCE (2019)