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2011 Fiscal Year Final Research Report

Molecular microbial ecology of hydrogen sulfide production and degradation in organic-polluted aquatic environments

Research Project

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Project/Area Number 21580232
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field General fisheries
Research InstitutionFukui Prefectural University

Principal Investigator

KONDO Ryuji  福井県立大学, 海洋生物資源学部, 准教授 (30244528)

Co-Investigator(Kenkyū-buntansha) NAKANO Shin-ichi  京都大学, 生態学研究センター, 教授 (50270723)
Co-Investigator(Renkei-kenkyūsha) KANEDA Atsushi  福井県立大学, 海洋生物資源学部, 講師 (70304649)
Project Period (FY) 2009 – 2011
Keywords微生物 / 環境微生物
Research Abstract

We developed new PCR primers for the rapid and sensitive detection and enumeration of dsrA in phototrophic purple and green sulfur bacteria simultaneously. The primers were applied to water and sediment samples from the Japanese meromictic Lake Suigetsu and the eutrophic Tokyo Bay, respectively. Phylogenetic analysis of the sequences of PCR products from lake water showed most clones were affiliated with brown-colored green sulfur bacteria within the Chlorobi, whileγ-proteobacterial species from sediments. Sequences of cloned PCR products show a differential distribution of sulfur bacterial groups in different environments.

  • Research Products

    (26 results)

All 2012 2011 2010 2009 Other

All Journal Article (8 results) (of which Peer Reviewed: 4 results) Presentation (17 results) Book (1 results)

  • [Journal Article] Abundance and bacterivory of heterotrophic nanoflagellates in the meromictic Lake Suigetsu2012

    • Author(s)
      T. Okamura, Y. Mori, S. Nakano and R. Kondo
    • Journal Title

      Japan. Aquatic Microbial Ecology

      Volume: 66(2) Pages: 149-158

    • DOI

      DOI:10.3354/ame01565

    • Peer Reviewed
  • [Journal Article] 沿岸環境の保全と修復における微生物学的側面-有明海再生を目指して-はじめに2012

    • Author(s)
      和田実、吉永郁生、近藤竜二
    • Journal Title

      日本水産学会誌

      Volume: 78(2) Pages: 274

  • [Journal Article] 沿岸環境の保全と修復における微生物学的側面-有明海再生を目指して-I-3.汽水域の硫黄循環2012

    • Author(s)
      近藤竜二
    • Journal Title

      日本水産学会誌

      Volume: 78(2) Pages: 277

    • DOI

      DOI:10.2331/suisan.78.277

  • [Journal Article] Abundance of sulphate-reducing bacteria in fish farm sediments along the coast of Japan and South Korea2012

    • Author(s)
      R. Kondo, K. Shigematsu, N. Kawahara, T. Okamura, Y. H. Yoon, T. Sakami, H. Yokoyama and Y. Koizumi
    • Journal Title

      Fisheries Science

      Volume: 78(1) Pages: 123-131

    • DOI

      DOI:10.1007/s12562-011-0439-3

    • Peer Reviewed
  • [Journal Article] Comprehensive detection of phototrophic sulfur bacteria using PCR primers that target reverse dissimilatory sulfite reductase gene2010

    • Author(s)
      Y. Mori, K. J. Purdy, B. B. Oakley and R. Kondo
    • Journal Title

      Microbes and Environments

      Volume: 25(3) Pages: 190-196

    • Peer Reviewed
  • [Journal Article] 水月湖~嫌気性微生物生態研究のための天然ラボ~2010

    • Author(s)
      近藤竜二、森裕美、岡村嵩彦、中野伸一
    • Journal Title

      日本微生物生態学会誌

      Volume: 25(2) Pages: 70-74

    • URL

      http://ci.nii.ac.jp/vol_issue/nels/AA11551577/ISS0000458877_ja.html

  • [Journal Article] 養殖場堆積物の微生物群集2009

    • Author(s)
      近藤竜二
    • Journal Title

      日本水産学会誌

      Volume: 75(4) Pages: 707-708

    • DOI

      DOI:10.2331/suisan.75.707

  • [Journal Article] Comparison of sulphate-reducing bacterial communities in Japanese fish farm sediments with different pollution levels

    • Author(s)
      R. Kondo, Y. Mori and T. Sakami
    • Journal Title

      Microbes and Environments

      Volume: (in press)

    • DOI

      DOI:10.1264/jsme2.ME11278

    • Peer Reviewed
  • [Presentation] An attempt to assess the environment by using microbial communities of the bottom sediments from marine areas of fish aquaculture2011

    • Author(s)
      T. Sakami, R. Kondo, T. Kobayashi
    • Organizer
      PICES 2011 Annual Meeting, Mechanisms of Marine Ecosystem Reorganization in the North Pacific Ocean
    • Place of Presentation
      Khabarovsk, Russia
    • Year and Date
      2011-10-18
  • [Presentation] 遺伝子型の異なるアオコ原因藍藻(Microcystis aeruginosa)の栄養塩濃度に対する増殖応答2011

    • Author(s)
      片岡剛文、本間隆満、中野伸一、近藤竜二
    • Organizer
      第27回日本微生物生態学会大会
    • Place of Presentation
      京都市
    • Year and Date
      2011-10-08
  • [Presentation] 汽水域の硫黄循環2011

    • Author(s)
      近藤竜二
    • Organizer
      平成23年度日本水産学会秋季大会
    • Place of Presentation
      長崎市
    • Year and Date
      2011-10-02
  • [Presentation] 汚染度の異なる養殖漁場底泥中の硫酸還元細菌の群集構造の比較2011

    • Author(s)
      近藤竜二、森裕美、坂見知子
    • Organizer
      平成23年度日本水産学会秋季大会
    • Place of Presentation
      長崎市
    • Year and Date
      2011-09-29
  • [Presentation] 水月湖水柱における従属栄養性ナノ鞭毛虫の細菌捕食2011

    • Author(s)
      岡村嵩彦、森裕美、中野伸一、近藤竜二
    • Organizer
      日本陸水学会第76回大会
    • Place of Presentation
      松江市
    • Year and Date
      2011-09-23
  • [Presentation] Sequence analysis of reverse dissimilatory sulfite reductase gene in sediments of Tokyo Bay(東京湾底泥における"逆"亜硫酸還元酵素遺伝子の解析)2010

    • Author(s)
      Y. Mori and R. Kondo
    • Organizer
      第26回日本微生物生態学会
    • Place of Presentation
      つくば市
    • Year and Date
      2010-11-25
  • [Presentation] 嫌気環境の従属栄養性ナノ鞭毛虫;その現存量と細菌捕食2010

    • Author(s)
      岡村嵩彦、森裕美、中野伸一、近藤竜二
    • Organizer
      日本陸水学会第75回大会
    • Place of Presentation
      弘前市
    • Year and Date
      2010-09-19
  • [Presentation] Population dynamics of anoxygenic phototrophic sulfur bacteria in the meromictic Lake Suigetsu in Japan2010

    • Author(s)
      Y. Mori, T. Okamura, T. Kataoka, S. Nakano, B. Oakley, K. J. Purdy and R. Kondo
    • Organizer
      13th International Symposium on Microbial Ecology
    • Place of Presentation
      Seattle, USA.
    • Year and Date
      2010-08-27
  • [Presentation] Anaerobic heterotrophic nanoflagellates : their abundance and bacterivory in a Japanese meromictic lake2010

    • Author(s)
      T. Okamura, Y. Mori, S. Nakano and R. Kondo
    • Organizer
      13th International Symposium on Microbial Ecology
    • Place of Presentation
      Seattle, USA
    • Year and Date
      2010-08-24
  • [Presentation] PCR primers for separate detection of intra-specific genotypic variations in a bloom-forming cyanobacterium, Microcystis aeruginosa2010

    • Author(s)
      T. Kataoka, R. Kondo, Y. Hodoki, K. Ohbayashi, Y. Kobayashi and S. Nakano
    • Organizer
      13th International Symposium on Microbial Ecology
    • Place of Presentation
      Seattle, USA
    • Year and Date
      2010-08-24
  • [Presentation] アオコの分布拡大に関する生態・分子系統地理学的研究2010

    • Author(s)
      中野伸一、奥田昇、天野一葉、大林夏湖、小林由紀、田中拓弥、程木義邦、渡邉信、田辺雄彦、近藤竜二、廣石伸互、高尾祥丈、片岡剛文
    • Organizer
      第57回日本生態学会大会
    • Place of Presentation
      東京
    • Year and Date
      2010-03-16
  • [Presentation] 水月湖における光合成硫黄細菌の分布と多様性2009

    • Author(s)
      森裕美、岡村嵩彦、中野伸一、B. B. Oakley、K. J. Purdy、近藤竜二
    • Organizer
      第25回日本微生物生態学会
    • Place of Presentation
      東広島市
    • Year and Date
      2009-11-21
  • [Presentation] 部分循環湖水柱の従属栄養性ナノ鞭毛虫の分布と細菌捕食2009

    • Author(s)
      岡村嵩彦、森裕美、藤田健吾、中野伸一、近藤竜二
    • Organizer
      第25回日本微生物生態学会
    • Place of Presentation
      東広島市
    • Year and Date
      2009-11-21
  • [Presentation] Seasonal changes in vertical abundance and composition of planktonic ciliates in Lake Suigetsu2009

    • Author(s)
      K. Fujita, S. Nakano, T. Okamura, R. Kondo, Y. Mori, S. Yoshikawa and K. Ohki
    • Organizer
      SIL Symposium on Global Change and Freshwater Environments
    • Place of Presentation
      Nanjing, China.
    • Year and Date
      2009-10-27
  • [Presentation] PCR法による部分循環湖における光合成硫黄細菌の動態解析2009

    • Author(s)
      森裕美、岡村嵩彦、中野伸一、B. B. Oakley、K. J. Purdy、近藤竜二
    • Organizer
      2009年日本ベントス学・日本プランクトン学会会合同大会
    • Place of Presentation
      函館市
    • Year and Date
      2009-10-18
  • [Presentation] 水月湖における繊毛虫の鉛直分布の季節変化と細菌摂食2009

    • Author(s)
      藤田健吾、中野伸一、近藤竜二、森裕美、岡村嵩彦
    • Organizer
      日本陸水学会第74回大会
    • Place of Presentation
      大分市
    • Year and Date
      2009-09-17
  • [Presentation] Depth variations in heterotrophic nanoflagellate abundance in the meromictic Lake Suigetsu2009

    • Author(s)
      T. Okamura, R. Kondo, Y. Mori, K. Fujita, S. Yoshikawa, K. Ohki and S. Nakano
    • Organizer
      The 14^<th> International Symposium on River and Lake Environments
    • Place of Presentation
      Ueda, Nagano
    • Year and Date
      2009-08-29
  • [Book] 硫黄循環と細菌の代謝、「増補改訂版海の環境微生物学」2011

    • Author(s)
      近藤竜二
    • Publisher
      恒星社厚生閣

URL: 

Published: 2013-07-31  

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