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Structure and movement of gliding machinery for Mycoplasma gliding

Research Project

Project/Area Number 24390107
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Bacteriology (including Mycology)
Research InstitutionOsaka City University

Principal Investigator

Miyata Makoto  大阪市立大学, 大学院理学研究科, 教授 (50209912)

Project Period (FY) 2012-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥18,590,000 (Direct Cost: ¥14,300,000、Indirect Cost: ¥4,290,000)
Fiscal Year 2014: ¥5,980,000 (Direct Cost: ¥4,600,000、Indirect Cost: ¥1,380,000)
Fiscal Year 2013: ¥5,850,000 (Direct Cost: ¥4,500,000、Indirect Cost: ¥1,350,000)
Fiscal Year 2012: ¥6,760,000 (Direct Cost: ¥5,200,000、Indirect Cost: ¥1,560,000)
Keywords細胞運動 / 電子顕微鏡 / 一分子計測 / 病原細菌 / 構造生物学 / 電子線クライオトモグラフィー / 寄生細菌 / 急速レプリカ法 / 電子線 / 急速凍結レプリカ法 / マイコプラズマ / 滑走運動 / 滑走装置 / 分子形態 / 高速AFM / 結晶化 / クライオ電子線トモグラフィー
Outline of Final Research Achievements

Mycoplalasma pneumonia, epidemic recent years is caused by a bacterium, Mycoplasma pneumoniae. Mycoplasmas glide by quite unique mechanisms, which are essential for infection. In this project, we studied the fasest species, Mycoplasma mobile and the pathogenic Mycoplasma pneumoniae and got the following results, (1) namometer-order three dimensional structure of gliding machinery, (2) identification, detecting activity and outline of structure, for essential proteins, (3) ATPase reaction of gliding machinery, (4) behaviors of “leg” molecule, (5) development of gene manipulation method and localization of gliding proteins.

Report

(5 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • Research Products

    (64 results)

All 2016 2015 2014 2013 2012 Other

All Int'l Joint Research (4 results) Journal Article (17 results) (of which Int'l Joint Research: 1 results,  Open Access: 11 results,  Peer Reviewed: 14 results,  Acknowledgement Compliant: 6 results) Presentation (32 results) (of which Int'l Joint Research: 3 results,  Invited: 17 results) Book (3 results) Remarks (8 results)

  • [Int'l Joint Research] 南京師範大学(中国)

    • Related Report
      2015 Annual Research Report
  • [Int'l Joint Research] Centre for Genomic Regulation, Barcelona/Universitat Autonoma de Barcelona(スペイン)

    • Related Report
      2015 Annual Research Report
  • [Int'l Joint Research] CNRS-Aix Marseille University(フランス)

    • Related Report
      2015 Annual Research Report
  • [Int'l Joint Research] Miami University(米国)

    • Related Report
      2015 Annual Research Report
  • [Journal Article] Prospects for the gliding mechanism of Mycoplasma mobile2016

    • Author(s)
      Miyata M, Hamaguchi T
    • Journal Title

      Current Opinion in Microbiology

      Volume: 29 Pages: 15-21

    • DOI

      10.1016/j.mib.2015.08.010

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Periodicity in attachment organelle revealed by electron cryotomography suggests conformational changes in gliding mechanism of Mycoplasma pneumoniae.2016

    • Author(s)
      Kawamoto, A., Matsuo, L., Yamamoto, H., Namba, K., Miyata, M.
    • Journal Title

      mBio

      Volume: 7(2) Issue: 2

    • DOI

      10.1128/mbio.00243-16

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 滑走するマイコプラズマ2016

    • Author(s)
      宮田真人
    • Journal Title

      臨床と微生物

      Volume: 42 Pages: 465-468

    • Related Report
      2015 Annual Research Report
  • [Journal Article] 最小微生物,マイコプラズマの滑走運動2015

    • Author(s)
      宮田真人
    • Journal Title

      Biologia 阪大理生物同窓会誌

      Volume: 12 Pages: 10-15

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report
    • Open Access
  • [Journal Article] Gliding mtility of Mycoplasma mobile on uniform oligosaccharides2015

    • Author(s)
      Kasai T, Hamaguchi T, Miyata M
    • Journal Title

      Journal of Bacteriology

      Volume: 197 Issue: 18 Pages: 2952-7

    • DOI

      10.1128/jb.00335-15

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Three-Dimensional Superlocalization Imaging of Gliding Mycoplasma mobile by Extraordinary Light Transmission through Arrayed Nanoholes2015

    • Author(s)
      Lee, W. Kinosita, Y. Oh, Y. Mikami, N. Yang, H. Miyata, M. Nishizaka, T. Kim, D.
    • Journal Title

      ACS Nano

      Volume: 9 Issue: 11 Pages: 10896-908

    • DOI

      10.1021/acsnano.5b03934

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Systematic structural analyses of attachment organelle in Mycoplasma pneumonia2015

    • Author(s)
      Nakane D, Kenri T, Matsuo L, Miyata M.
    • Journal Title

      PLOS Pathogens

      Volume: 11 Issue: 12 Pages: 1-19

    • DOI

      10.1371/journal.ppat.1005299

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Gliding direction of Mycoplasma mobile2015

    • Author(s)
      Morio H, Kasai T, Miyata M
    • Journal Title

      Journal of Bacteriology

      Volume: 198 Issue: 2 Pages: 283-90

    • DOI

      10.1128/jb.00499-15

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Unitary step of gliding machinery in Mycoplasma mobile.2014

    • Author(s)
      Kinosita Y, Nakane D, Sugawa M, Masaike T, Mizutani K, Miyata M, Nishizaka T.
    • Journal Title

      Proceedings of the National Academy of Sciences of the United States of America

      Volume: 111 Issue: 23 Pages: 8601-6

    • DOI

      10.1073/pnas.1310355111

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] 最小生物,マイコプラズマ滑走運動のメカニズム2014

    • Author(s)
      宮田真人
    • Journal Title

      科研費NEWS

      Volume: 3 Pages: 16-16

    • Related Report
      2014 Annual Research Report
    • Open Access
  • [Journal Article] Localization of P42 and an F1-ATPase α-subunit homolog of the gliding machinery in Mycoplasma mobile revealed by newly developed gene manipulation and fluorescent protein tagging.2014

    • Author(s)
      Tulum I, Yabe M, Uenoyama A, Miyata M.
    • Journal Title

      Journal of Bacteriology

      Volume: 196 Issue: 10 Pages: 1815-24

    • DOI

      10.1128/jb.01418-13

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Molecular basis of SMC ATPase activation: role of internal structural changes of the regulatory subcomplex ScpAB2013

    • Author(s)
      Kamada K, Miyata M, Hirano T.
    • Journal Title

      Structure

      Volume: 2126 Issue: 4 Pages: 57-9

    • DOI

      10.1016/j.str.2013.02.016

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Decoding system for the AUA codon by tRNAIle with the UAU anticodon in Myrcrplasma mobile2013

    • Author(s)
      Taniguchi T, Miyauchi K, Nakane D, Miyata M, Muto A, Nishimura S, Suzuki T
    • Journal Title

      Nucleic Acids Research

      Volume: 41 Issue: 4 Pages: 2621-2631

    • DOI

      10.1093/nar/gks1344

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Binding in Mycoplasma mobile and Mycoplasma pneumoniae gliding analyzed through inhibition by synthesized sialylated compounds2013

    • Author(s)
      Kasai T, Nakane D, Ishida H, Ando H, Kiso M, Miyata M
    • Journal Title

      Journal of Bacteriology

      Volume: 195 Issue: 3 Pages: 429-435

    • DOI

      10.1128/jb.01141-12

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Whole surface image of Mycoplasma mobile, suggested by protein identification and immunofluorescence microscopy.2012

    • Author(s)
      Wu HN, Miyata M.
    • Journal Title

      Journal of Bacteriology

      Volume: 194 Issue: 21 Pages: 5848-55

    • DOI

      10.1128/jb.00976-12

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Whole surface image of Mycoplasma mobile, suggested by protein identification and immunofluorescence microscopy2012

    • Author(s)
      Wu HN, Miyata M.
    • Journal Title

      Journal of Bacteriology

      Volume: 194 Issue: 12 Pages: 5848-55

    • DOI

      10.1128/jb.00208-12

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] "Mycoplasmal Antigen Modulation," a Novel Surface Variation Suggested for a Lipoprotein Specifically Localized on Mycoplasma mobile2012

    • Author(s)
      Wu HN, Kawaguchi C, Nakane D, Miyata M
    • Journal Title

      Current Microbiology

      Volume: 64 Issue: 5 Pages: 433-440

    • DOI

      10.1007/s00284-012-0090-y

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Presentation] Mycoplasma mobile の新奇滑走タンパク質の構造的洞察2016

    • Author(s)
      濵口 祐, 田原悠平, 松生大輝, 宮田真人
    • Organizer
      第89回日本細菌学会総会
    • Place of Presentation
      大阪国際交流センター (大阪府大阪市)
    • Year and Date
      2016-03-23
    • Related Report
      2015 Annual Research Report
  • [Presentation] Origin of motility suggested by special bacteria2016

    • Author(s)
      Miyata M
    • Organizer
      The 2015 OCARINA Annual International Meeting
    • Place of Presentation
      大阪市立大学 学術情報総合センター (大阪府大阪市)
    • Year and Date
      2016-03-17
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Mollicutes species developed three motility systems independently2016

    • Author(s)
      Miyata M
    • Organizer
      University of Bordeaux - Osaka University, Osaka City Universtity Mini-Symposium on Synthetic Biology
    • Place of Presentation
      大阪大学産業科学研究所 (大阪府吹田市)
    • Year and Date
      2016-01-26
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Gliding machinery of Mycoplasma mobile, pathogenic bacterium2015

    • Author(s)
      Miyata M
    • Organizer
      the 2nd EastAsia Microscopy Conference (EAMC2)
    • Place of Presentation
      姫路商工会議所 (兵庫県姫路市)
    • Year and Date
      2015-11-24
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 最小細菌、マイコプラズマの滑走運動2015

    • Author(s)
      宮田真人
    • Organizer
      大阪大学微生物研究所アドバンスセミナー
    • Place of Presentation
      大阪大学 谷口記念講堂 (大阪府吹田市)
    • Year and Date
      2015-09-25
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 最小細菌、マイコプラズマの滑走運動2015

    • Author(s)
      宮田真人
    • Organizer
      エアロ・アクアバイオメカニズム学会 第33回定例講演会
    • Place of Presentation
      鳥取大学 (鳥取県鳥取市)
    • Year and Date
      2015-09-03
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 最小生物、マイコプラズマの滑走運動2015

    • Author(s)
      宮田真人
    • Organizer
      第12回21世紀大腸菌研究会
    • Place of Presentation
      琵琶湖グランドホテル (滋賀県大津市)
    • Year and Date
      2015-06-04
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] Mycoplasma pneumoniae, P1 adhesin の構造と機能2015

    • Author(s)
      松本 優, 川北祥人, 見理 剛, 森 茂太郎, 木下実紀, 濵口 祐, 宮田真人
    • Organizer
      日本マイコプラズマ学会 第42回学術集会
    • Place of Presentation
      慶應義塾大学 (東京都港区)
    • Year and Date
      2015-05-22
    • Related Report
      2015 Annual Research Report
  • [Presentation] マイコプラズマ・モービレの滑走装置に局在する新奇タンパク質2015

    • Author(s)
      濵口 祐, 田原悠平, 宮田真人
    • Organizer
      日本マイコプラズマ学会 第42回学術集会
    • Place of Presentation
      慶應義塾大学 (東京都港区)
    • Year and Date
      2015-05-22
    • Related Report
      2015 Annual Research Report
  • [Presentation] Bridging protein in gliding machinery of Mycoplasma mobile2015

    • Author(s)
      濵口 祐
    • Organizer
      The 2014 OCARINA Annual International Meeting
    • Place of Presentation
      大阪市立大学(大阪府・大阪市)
    • Year and Date
      2015-03-04 – 2015-03-05
    • Related Report
      2014 Annual Research Report
  • [Presentation] Internal structure and structural change of gliding machinery in Mycoplasma mobile2015

    • Author(s)
      Nishikawa M, Nakan D, Kawamoto S, Kato T, Namba K, Miyata M
    • Organizer
      IGER International Symposium on Frontiers in Biological Research with Advanced Electron Microscope Technologies
    • Place of Presentation
      名古屋大学(愛知県・名古屋市)
    • Year and Date
      2015-01-15 – 2015-01-16
    • Related Report
      2014 Annual Research Report
  • [Presentation] Exploration of the gliding machinery of Mycoplasma mobile by quick-freeze-deep-etch replica electron microscopy2015

    • Author(s)
      Bertin C, Tahara Y, Katayama E, Miyata M
    • Organizer
      IGER International Symposium on Frontiers in Biological Research with Advanced Electron Microscope Technologies
    • Place of Presentation
      名古屋大学(愛知県・名古屋市)
    • Year and Date
      2015-01-15 – 2015-01-16
    • Related Report
      2014 Annual Research Report
  • [Presentation] マイコプラズマ滑走運動に関わる新奇タンパク質2015

    • Author(s)
      濵口 祐, 宮田真人
    • Organizer
      2015年 生体運動合同班会議
    • Place of Presentation
      学習院大学(東京都・豊島区)
    • Year and Date
      2015-01-07 – 2015-01-09
    • Related Report
      2014 Annual Research Report
  • [Presentation] 単一糖鎖上におけるマイコプラズマの滑走運動2015

    • Author(s)
      笠井大司, 濵口 祐, 宮田真人
    • Organizer
      2015年 生体運動合同班会議
    • Place of Presentation
      学習院大学(東京都・豊島区)
    • Year and Date
      2015-01-07 – 2015-01-09
    • Related Report
      2014 Annual Research Report
  • [Presentation] 滑走するマイコプラズマ2014

    • Author(s)
      宮田真人
    • Organizer
      第7回ニコニコ学会βシンポジウム
    • Place of Presentation
      ニコファーレ(東京都・港区)
    • Year and Date
      2014-12-20
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 最少微生物、マイコプラズマの滑走運動2014

    • Author(s)
      宮田真人
    • Organizer
      日本生体エネルギー研究会 第40回討論会
    • Place of Presentation
      愛媛大学(愛媛県・松山市)
    • Year and Date
      2014-12-11 – 2014-12-13
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] マイコプラズマ運動三種盛り2014

    • Author(s)
      宮田真人
    • Organizer
      理研シンポジウム 第4回分子モーター討論会
    • Place of Presentation
      大阪大学(大阪府・吹田市)
    • Year and Date
      2014-06-27 – 2014-06-28
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] マイコプラズマの滑走運動の機構2014

    • Author(s)
      宮田真人
    • Organizer
      6月ロボティクス研究会
    • Place of Presentation
      名古屋大学(愛知県・名古屋市)
    • Year and Date
      2014-06-09
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Localization and roles of F-ATPase subunit homologs and P42 of Mycoplasma mobile revealed by gene manipulation2014

    • Author(s)
      Tulum I, Yabe M, Uenoyama A, Miyata M
    • Organizer
      20th Congress of International Organization for Mycoplasmology
    • Place of Presentation
      Calros Gomes Thaeter (Blumenau, Brazil)
    • Year and Date
      2014-06-01 – 2014-06-06
    • Related Report
      2014 Annual Research Report
  • [Presentation] 最少微生物、マイコプラズマの滑走運動2014

    • Author(s)
      宮田真人
    • Organizer
      第15回大阪大学理学部同窓会
    • Place of Presentation
      大阪大学(大阪府・豊中市)
    • Year and Date
      2014-05-03
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Mycoplasma, the smallest microorganism moves by a novel mechanism2014

    • Author(s)
      Miyata M
    • Organizer
      The 2013 OCARINA Annual International Meeting
    • Place of Presentation
      大阪市立大学(大阪市)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Role of F1-ATPase subunits in Mycoplasma gliding suggested by gene manipulation2014

    • Author(s)
      Tulum I, Yabe M, Uenoyama A, Miyata M.
    • Organizer
      2014年生体運動研究合同班会議
    • Place of Presentation
      千葉大学(千葉市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Gliding of Mycoplasma mobilecan be explained by directed binding2013

    • Author(s)
      Tahara Y
    • Organizer
      BLAST XII MEETING
    • Place of Presentation
      Tucson, AZ, USA
    • Year and Date
      2013-01-22
    • Related Report
      2012 Annual Research Report
  • [Presentation] 病原細菌、マイコプラズマ滑走運動のメカニズム2013

    • Author(s)
      宮田真人
    • Organizer
      第86回日本生化学会大会
    • Place of Presentation
      パシフィコ横浜(横浜市)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 肺炎細菌、マイコプラズマの滑走運動メカニズム2013

    • Author(s)
      宮田真人
    • Organizer
      第66回日本細菌学会九州支部総会及び第50回日本ウィルス学会九州支部総会
    • Place of Presentation
      長崎大学(長崎市)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Gliding motility of Mycoplasma, a pathogenic bacterium on solid surfaces2013

    • Author(s)
      Miyata M
    • Organizer
      International Symposium on Cell Surface Structures and Functions
    • Place of Presentation
      名古屋大学(名古屋市)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Crawing receptors of Mycoplasma, pathogenic bacgteria2013

    • Author(s)
      Miyata M
    • Organizer
      1st AWEST 2013
    • Place of Presentation
      淡路夢舞台国際会議場(淡路市)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Mycoplasama pueumoniae の滑走運動2013

    • Author(s)
      宮田真人
    • Organizer
      日本マイコプラズマ学会 第40回学術集会
    • Place of Presentation
      UDX Gallery NEXT-2(東京都)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 病原細菌, マイコプラズマの滑走運動のメカニズム2012

    • Author(s)
      宮田真人
    • Organizer
      第45回 日本原生動物学会大会
    • Place of Presentation
      姫路市(招待講演)
    • Year and Date
      2012-11-25
    • Related Report
      2012 Annual Research Report
  • [Presentation] マイコプラズマ滑走運動の謎にせまる2012

    • Author(s)
      宮田真人
    • Organizer
      第50回 日本生物物理学会年会
    • Place of Presentation
      名古屋市(招待講演)
    • Year and Date
      2012-09-23
    • Related Report
      2012 Annual Research Report
  • [Presentation] Gliding head of Mycoplasma mobile2012

    • Author(s)
      Miyata M
    • Organizer
      19th Congress of International Organization for Mycoplasmology
    • Place of Presentation
      Toulouse, France
    • Year and Date
      2012-07-19
    • Related Report
      2012 Annual Research Report
  • [Presentation] おもしろい, 画像でつづる, 24年-マイコプラズマ研究でわかったこと2012

    • Author(s)
      宮田真人
    • Organizer
      第39回 日本マイコプラズマ学会学術集会
    • Place of Presentation
      盛岡市(招待講演)
    • Year and Date
      2012-05-24
    • Related Report
      2012 Annual Research Report
  • [Book] 最新マイコプラズマ学2016

    • Author(s)
      神谷 茂, 泉川欣一, 賀来満男, 佐々木次雄, 難波成任, 宮田真人, 大島研郎, 柿澤茂行, 見理 剛, 佐々木裕子, 佐藤静夫, 皿谷 健, 柴田健一郎, 清水 隆, 田中裕士, 原澤 亮, 堀野敦子, 松田和洋, 柳原 格, 渡邉秀裕(ほか37名)
    • Total Pages
      259
    • Publisher
      近代出版
    • Related Report
      2015 Annual Research Report
  • [Book] マイコプラズマの運動機構2015

    • Author(s)
      宮田真人
    • Total Pages
      250
    • Publisher
      近代出版
    • Related Report
      2014 Annual Research Report
  • [Book] Molecular and cell biology of Mollicutes2013

    • Author(s)
      Miyata M, Nakane D.
    • Total Pages
      324
    • Publisher
      Horizon Press
    • Related Report
      2013 Annual Research Report
  • [Remarks] 研究室ホームページ

    • URL

      http://www.sci.osaka-cu.ac.jp/~miyata/index.html

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report
  • [Remarks] 領域ホームページ

    • URL

      http://bunshi5.bio.nagoya-u.ac.jp/~mycmobile/index.php

    • Related Report
      2015 Annual Research Report
  • [Remarks] 新学術領域「運動マシナリー」による汎用3Dプリンターの生物学への応用 Facebook

    • URL

      https://www.facebook.com/motility.machinery

    • Related Report
      2015 Annual Research Report
  • [Remarks] 新学術領域「運動マシナリー」総括班による先端的電子顕微鏡観察法の開発 Facebook

    • URL

      https://www.facebook.com/freeze.fracture

    • Related Report
      2015 Annual Research Report
  • [Remarks] 運動マシナリー・ディスカッション Facebook

    • URL

      https://www.facebook.com/mycmobile

    • Related Report
      2015 Annual Research Report
  • [Remarks] オンラインビデオライブラリー

    • URL

      http://bunshi5.bio.nagoya-u.ac.jp/~mycmobile/member/index.html

    • Related Report
      2014 Annual Research Report
  • [Remarks] 研究室ホームページ

    • URL

      http://www.sci.osaka-cu.ac.jp/~miyata/index.html

    • Related Report
      2013 Annual Research Report
  • [Remarks]

    • Related Report
      2012 Annual Research Report

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Published: 2012-04-24   Modified: 2022-01-31  

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